RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ZNF397Q8NF99 534 aaPredicted RBP6.75□□□□□ -1.33
USP38-203ENST00000511739 TSG101Q99816 390 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 RAB34Q9BZG1 259 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 CEP131Q9UPN4 1083 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 UHRF1BP1LA0JNW5 1464 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 GSTTP1A0A1W2PQM5 241 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 ZNF354CQ86Y25 554 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 TCP11L2Q8N4U5 519 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 FERMT1Q9BQL6 677 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 NF2P35240 595 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 GSE1Q14687 1217 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 KIAA1328Q86T90 577 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 AEBP1Q8IUX7 1158 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 CTNNBL1Q8WYA6 563 aaPredicted RBP6.74□□□□□ -1.33
USP38-203ENST00000511739 INCENPQ9NQS7 918 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 RAPGEF3O95398 923 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 MBD3O95983 291 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 IMMTQ16891 758 aaKnown RBP6.74□□□□□ -1.33
USP38-203ENST00000511739 TAF3Q5VWG9 929 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 LARP1Q6PKG0 1096 aaKnown RBP6.74□□□□□ -1.33
USP38-203ENST00000511739 VPS36Q86VN1 386 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 PPM1EQ8WY54 764 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 BEGAINQ9BUH8 593 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 LRRCC1Q9C099 1032 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 CCDC184Q52MB2 194 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 C14orf93Q9H972 538 aaKnown RBP6.74□□□□□ -1.33
USP38-203ENST00000511739 AKAP2Q9Y2D5 859 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 BLOC1S2Q6QNY1 142 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 PANK1Q8TE04 598 aa6.74□□□□□ -1.33
USP38-203ENST00000511739 MAP4K4O95819 1239 aaPredicted RBP6.73□□□□□ -1.33
USP38-203ENST00000511739 TMEM266Q2M3C6 531 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 DHX37Q8IY37 1157 aaKnown RBP6.73□□□□□ -1.33
USP38-203ENST00000511739 DMRT2Q9Y5R5 561 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 FAM177A1Q8N128 213 aaPredicted RBP6.73□□□□□ -1.33
USP38-203ENST00000511739 CTCFLQ8NI51 663 aaPredicted RBP6.73□□□□□ -1.33
USP38-203ENST00000511739 RSPH6AQ9H0K4 717 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 SLC12A5Q9H2X9 1139 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 MPRIPQ6WCQ1 1025 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 TNMDQ9H2S6 317 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 SAMM50Q9Y512 469 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 INSRP06213 1382 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 ERLIN1O75477 346 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 BAG4O95429 457 aaKnown RBP6.73□□□□□ -1.33
USP38-203ENST00000511739 FAM193AP78312 1265 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 CETN1Q12798 172 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 TAF12Q16514 161 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 LRRC45Q96CN5 670 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 UTP14AQ9BVJ6 771 aaKnown RBP6.73□□□□□ -1.33
USP38-203ENST00000511739 TRAPPC8Q9Y2L5 1435 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 FAM43AQ8N2R8 423 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 DYDC1Q8WWB3 177 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 TSPY26PQ9H489 355 aa6.73□□□□□ -1.33
USP38-203ENST00000511739 EXOC5O00471 708 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 KRT85P78386 507 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 LARP1BQ659C4 914 aaKnown RBP6.72□□□□□ -1.33
USP38-203ENST00000511739 KCNH5Q8NCM2 988 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 DDX23Q9BUQ8 820 aaKnown RBP6.72□□□□□ -1.33
USP38-203ENST00000511739 ZMYND15Q9H091 742 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 MAST1Q9Y2H9 1570 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 ABCC11Q96J66 1382 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 GOLGA6L10A0A0M3HER8 536 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 SRGAP3O43295 1099 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 KIF20AO95235 890 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 FERP16591 822 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 POLD1P28340 1107 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 CACNA2D4Q7Z3S7 1137 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 CCDC113Q9H0I3 377 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 NAPBQ9H115 298 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 C1orf115Q9H7X2 142 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 PODXL2Q9NZ53 605 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 MYO5CQ9NQX4 1742 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 NSD3Q9BZ95 1437 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 RANBP6O60518 1105 aaKnown RBP6.72□□□□□ -1.33
USP38-203ENST00000511739 HLA-DOAP06340 250 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 CBX1P83916 185 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 KRT32Q14532 448 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 FKBP15Q5T1M5 1219 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 IQCA1Q86XH1 822 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 TSNARE1Q96NA8 513 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 RFC4P35249 363 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 MAP3K12Q12852 859 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 TRMT112Q9UI30 125 aaKnown RBP6.72□□□□□ -1.33
USP38-203ENST00000511739 PARD3Q8TEW0 1356 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 SLC5A1P13866 664 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 NASPP49321 788 aaPredicted RBP6.72□□□□□ -1.33
USP38-203ENST00000511739 CKAP2LQ8IYA6 745 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 SPC24Q8NBT2 197 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 PUF60Q9UHX1 559 aaKnown RBP6.72□□□□□ -1.33
USP38-203ENST00000511739 HDAC9Q9UKV0 1011 aa6.72□□□□□ -1.33
USP38-203ENST00000511739 ADCY10Q96PN6 1610 aa6.71□□□□□ -1.33
USP38-203ENST00000511739 TTC21AQ8NDW8 1320 aa6.71□□□□□ -1.33
USP38-203ENST00000511739 LDHCP07864 332 aa6.71□□□□□ -1.33
USP38-203ENST00000511739 CCDC192P0DO97 292 aa6.71□□□□□ -1.33
USP38-203ENST00000511739 MAP2K1Q02750 393 aaPredicted RBP6.71□□□□□ -1.33
USP38-203ENST00000511739 EXOSC9Q06265 439 aaKnown RBP6.71□□□□□ -1.33
USP38-203ENST00000511739 SLFN5Q08AF3 891 aa6.71□□□□□ -1.33
USP38-203ENST00000511739 SPA17Q15506 151 aa6.71□□□□□ -1.33
USP38-203ENST00000511739 CAVIN1Q6NZI2 390 aaKnown RBP6.71□□□□□ -1.33
USP38-203ENST00000511739 CDCA7LQ96GN5 454 aa6.71□□□□□ -1.33
USP38-203ENST00000511739 CEP63Q96MT8 703 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms