RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CCDC9Q9Y3X0 531 aaKnown RBP19.17■□□□□ 0.66
SCLT1-209ENST00000511426 BCL9O00512 1426 aa19.17■□□□□ 0.66
SCLT1-209ENST00000511426 C5P01031 1676 aa19.16■□□□□ 0.66
SCLT1-209ENST00000511426 DDX58O95786 925 aaKnown RBP19.16■□□□□ 0.66
SCLT1-209ENST00000511426 NECTIN2Q92692 538 aa19.16■□□□□ 0.66
SCLT1-209ENST00000511426 USP21Q9UK80 565 aa19.15■□□□□ 0.66
SCLT1-209ENST00000511426 IGHDP01880 384 aa19.14■□□□□ 0.65
SCLT1-209ENST00000511426 GNAI3P08754 354 aa19.14■□□□□ 0.65
SCLT1-209ENST00000511426 MEX3CQ5U5Q3 659 aaKnown RBP19.14■□□□□ 0.65
SCLT1-209ENST00000511426 RPAP2Q8IXW5 612 aaPredicted RBP19.13■□□□□ 0.65
SCLT1-209ENST00000511426 DNAAF4Q8WXU2 420 aa19.13■□□□□ 0.65
SCLT1-209ENST00000511426 PHAXQ9H814 394 aaKnown RBP19.13■□□□□ 0.65
SCLT1-209ENST00000511426 PDIA6Q15084 440 aa19.12■□□□□ 0.65
SCLT1-209ENST00000511426 KSR2Q6VAB6 950 aa19.12■□□□□ 0.65
SCLT1-209ENST00000511426 HDAC5Q9UQL6 1122 aa19.12■□□□□ 0.65
SCLT1-209ENST00000511426 F6X3S4 739 aa19.11■□□□□ 0.65
SCLT1-209ENST00000511426 SLC4A10Q6U841 1118 aa19.11■□□□□ 0.65
SCLT1-209ENST00000511426 SMC5Q8IY18 1101 aa19.11■□□□□ 0.65
SCLT1-209ENST00000511426 PIGBQ92521 554 aa19.11■□□□□ 0.65
SCLT1-209ENST00000511426 ITGB4P16144 1822 aa19.11■□□□□ 0.65
SCLT1-209ENST00000511426 THSD7AQ9UPZ6 1657 aa19.11■□□□□ 0.65
SCLT1-209ENST00000511426 GCC1Q96CN9 775 aa19.11■□□□□ 0.65
SCLT1-209ENST00000511426 SRCIN1Q9C0H9 1055 aa19.11■□□□□ 0.65
SCLT1-209ENST00000511426 DOT1LQ8TEK3 1739 aa19.1■□□□□ 0.65
SCLT1-209ENST00000511426 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
SCLT1-209ENST00000511426 ALDH1L1O75891 902 aa19.1■□□□□ 0.65
SCLT1-209ENST00000511426 ADCY9O60503 1353 aa19.09■□□□□ 0.65
SCLT1-209ENST00000511426 PI4KAP2A4QPH2 592 aa19.09■□□□□ 0.65
SCLT1-209ENST00000511426 PI4KAP1Q8N8J0 262 aa19.09■□□□□ 0.65
SCLT1-209ENST00000511426 USP16Q9Y5T5 823 aa19.09■□□□□ 0.65
SCLT1-209ENST00000511426 ATRNO75882 1429 aa19.09■□□□□ 0.65
SCLT1-209ENST00000511426 LRP10Q7Z4F1 713 aa19.08■□□□□ 0.65
SCLT1-209ENST00000511426 ATG3Q9NT62 314 aa19.08■□□□□ 0.65
SCLT1-209ENST00000511426 TRPC5Q9UL62 973 aaPredicted RBP19.08■□□□□ 0.65
SCLT1-209ENST00000511426 GNAI2P04899 355 aa19.08■□□□□ 0.64
SCLT1-209ENST00000511426 BEND3Q5T5X7 828 aa19.08■□□□□ 0.64
SCLT1-209ENST00000511426 ANKRD44Q8N8A2 993 aa19.08■□□□□ 0.64
SCLT1-209ENST00000511426 MARCH10Q8NA82 808 aaPredicted RBP19.08■□□□□ 0.64
SCLT1-209ENST00000511426 MEIS3Q99687 375 aa19.08■□□□□ 0.64
SCLT1-209ENST00000511426 CICQ96RK0 1608 aaPredicted RBP19.07■□□□□ 0.64
SCLT1-209ENST00000511426 HMMRO75330 724 aa19.07■□□□□ 0.64
SCLT1-209ENST00000511426 STARD3NLO95772 234 aa19.07■□□□□ 0.64
SCLT1-209ENST00000511426 FAM98CQ17RN3 349 aaKnown RBP19.07■□□□□ 0.64
SCLT1-209ENST00000511426 PROSER3Q2NL68 480 aa19.07■□□□□ 0.64
SCLT1-209ENST00000511426 AFF2P51816 1311 aa19.07■□□□□ 0.64
SCLT1-209ENST00000511426 LINS1Q8NG48 757 aa19.06■□□□□ 0.64
SCLT1-209ENST00000511426 GJD4Q96KN9 370 aaPredicted RBP19.06■□□□□ 0.64
SCLT1-209ENST00000511426 ONECUT3O60422 494 aaPredicted RBP19.05■□□□□ 0.64
SCLT1-209ENST00000511426 PTCD1O75127 700 aaKnown RBP19.05■□□□□ 0.64
SCLT1-209ENST00000511426 PRIM1P49642 420 aaKnown RBP19.05■□□□□ 0.64
SCLT1-209ENST00000511426 NEXNQ0ZGT2 675 aa19.05■□□□□ 0.64
SCLT1-209ENST00000511426 CEP85Q6P2H3 762 aa19.05■□□□□ 0.64
SCLT1-209ENST00000511426 SMARCC1Q92922 1105 aaPredicted RBP19.05■□□□□ 0.64
SCLT1-209ENST00000511426 ASAP1Q9ULH1 1129 aa19.05■□□□□ 0.64
SCLT1-209ENST00000511426 MAP3K2Q9Y2U5 619 aa19.05■□□□□ 0.64
SCLT1-209ENST00000511426 ANXA1P04083 346 aa19.04■□□□□ 0.64
SCLT1-209ENST00000511426 UBTFL1P0CB47 393 aaPredicted RBP19.04■□□□□ 0.64
SCLT1-209ENST00000511426 ANKRD13DQ6ZTN6 518 aa19.03■□□□□ 0.64
SCLT1-209ENST00000511426 COPS6Q7L5N1 327 aa19.03■□□□□ 0.64
SCLT1-209ENST00000511426 RIC3Q7Z5B4 369 aa19.03■□□□□ 0.64
SCLT1-209ENST00000511426 XAGE3Q8WTP9 111 aa19.03■□□□□ 0.64
SCLT1-209ENST00000511426 USP44Q9H0E7 712 aa19.03■□□□□ 0.64
SCLT1-209ENST00000511426 MYL6BP14649 208 aa19.02■□□□□ 0.64
SCLT1-209ENST00000511426 ZNF831Q5JPB2 1677 aa19.02■□□□□ 0.64
SCLT1-209ENST00000511426 PLBD2Q8NHP8 589 aa19.02■□□□□ 0.64
SCLT1-209ENST00000511426 SIRT2Q8IXJ6 389 aa19.01■□□□□ 0.63
SCLT1-209ENST00000511426 SYTL4Q96C24 671 aaPredicted RBP19.01■□□□□ 0.63
SCLT1-209ENST00000511426 METTL22Q9BUU2 404 aaPredicted RBP19.01■□□□□ 0.63
SCLT1-209ENST00000511426 C1orf115Q9H7X2 142 aa19.01■□□□□ 0.63
SCLT1-209ENST00000511426 UTYO14607 1347 aa19.01■□□□□ 0.63
SCLT1-209ENST00000511426 DCTPP1Q9H773 170 aa19.01■□□□□ 0.63
SCLT1-209ENST00000511426 PDZRN3Q9UPQ7 1066 aa19.01■□□□□ 0.63
SCLT1-209ENST00000511426 NUCB1Q02818 461 aa19■□□□□ 0.63
SCLT1-209ENST00000511426 TSHZ2Q9NRE2 1034 aa19■□□□□ 0.63
SCLT1-209ENST00000511426 NBPF26B4DH59 902 aa18.99■□□□□ 0.63
SCLT1-209ENST00000511426 AIMP1Q12904 312 aaKnown RBP18.99■□□□□ 0.63
SCLT1-209ENST00000511426 NBPF14Q5TI25 921 aa18.99■□□□□ 0.63
SCLT1-209ENST00000511426 NBPF10Q6P3W6 841 aaKnown RBP18.99■□□□□ 0.63
SCLT1-209ENST00000511426 NBPF15Q8N660 670 aa18.99■□□□□ 0.63
SCLT1-209ENST00000511426 RBM42Q9BTD8 480 aaKnown RBP18.98■□□□□ 0.63
SCLT1-209ENST00000511426 COL15A1P39059 1388 aa18.98■□□□□ 0.63
SCLT1-209ENST00000511426 ATP8B2P98198 1209 aa18.97■□□□□ 0.63
SCLT1-209ENST00000511426 DNAJC10Q8IXB1 793 aa18.97■□□□□ 0.63
SCLT1-209ENST00000511426 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
SCLT1-209ENST00000511426 TJP1Q07157 1748 aa18.97■□□□□ 0.63
SCLT1-209ENST00000511426 NHSQ6T4R5 1651 aa18.96■□□□□ 0.63
SCLT1-209ENST00000511426 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
SCLT1-209ENST00000511426 A0A0G2JS52 829 aa18.96■□□□□ 0.63
SCLT1-209ENST00000511426 GRM8O00222 908 aa18.96■□□□□ 0.63
SCLT1-209ENST00000511426 A1BGP04217 495 aa18.96■□□□□ 0.63
SCLT1-209ENST00000511426 CYP19A1P11511 503 aaPredicted RBP18.96■□□□□ 0.63
SCLT1-209ENST00000511426 MYT1Q01538 1121 aa18.96■□□□□ 0.63
SCLT1-209ENST00000511426 MTX1Q13505 466 aa18.96■□□□□ 0.63
SCLT1-209ENST00000511426 CHD1LQ86WJ1 897 aa18.96■□□□□ 0.63
SCLT1-209ENST00000511426 PALLDQ8WX93 1383 aa18.96■□□□□ 0.63
SCLT1-209ENST00000511426 NEURL1BA8MQ27 555 aa18.95■□□□□ 0.62
SCLT1-209ENST00000511426 IL6STP40189 918 aaPredicted RBP18.95■□□□□ 0.62
SCLT1-209ENST00000511426 ZNF772Q68DY9 489 aaPredicted RBP18.95■□□□□ 0.62
SCLT1-209ENST00000511426 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
SCLT1-209ENST00000511426 LRRFIP2Q9Y608 721 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms