RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 RFC4P35249 363 aa18.4■□□□□ 0.54
DDX41-212ENST00000511040 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
DDX41-212ENST00000511040 STARD3NLO95772 234 aa18.39■□□□□ 0.53
DDX41-212ENST00000511040 ADRA2BP18089 450 aa18.39■□□□□ 0.53
DDX41-212ENST00000511040 CANXP27824 592 aaKnown RBP18.39■□□□□ 0.53
DDX41-212ENST00000511040 SRP68Q9UHB9 627 aaKnown RBP18.39■□□□□ 0.53
DDX41-212ENST00000511040 SENP3-EIF4A1A0A087X0R7 540 aa18.38■□□□□ 0.53
DDX41-212ENST00000511040 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
DDX41-212ENST00000511040 SOS1Q07889 1333 aaPredicted RBP18.38■□□□□ 0.53
DDX41-212ENST00000511040 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
DDX41-212ENST00000511040 APAF1O14727 1248 aa18.37■□□□□ 0.53
DDX41-212ENST00000511040 PNISRQ8TF01 805 aaKnown RBP18.37■□□□□ 0.53
DDX41-212ENST00000511040 TRIM35Q9UPQ4 493 aa18.37■□□□□ 0.53
DDX41-212ENST00000511040 A1BGP04217 495 aa18.36■□□□□ 0.53
DDX41-212ENST00000511040 SYT17Q9BSW7 474 aa18.36■□□□□ 0.53
DDX41-212ENST00000511040 TEX13AQ9BXU3 409 aaPredicted RBP18.36■□□□□ 0.53
DDX41-212ENST00000511040 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
DDX41-212ENST00000511040 USP16Q9Y5T5 823 aa18.36■□□□□ 0.53
DDX41-212ENST00000511040 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
DDX41-212ENST00000511040 GYS1P13807 737 aa18.35■□□□□ 0.53
DDX41-212ENST00000511040 PIP4K2AP48426 406 aaPredicted RBP18.35■□□□□ 0.53
DDX41-212ENST00000511040 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
DDX41-212ENST00000511040 MMP10P09238 476 aa18.34■□□□□ 0.53
DDX41-212ENST00000511040 TSPYL4Q9UJ04 414 aa18.34■□□□□ 0.53
DDX41-212ENST00000511040 LAS1LQ9Y4W2 734 aaKnown RBP18.34■□□□□ 0.53
DDX41-212ENST00000511040 COL15A1P39059 1388 aa18.33■□□□□ 0.53
DDX41-212ENST00000511040 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
DDX41-212ENST00000511040 EIF4A1P60842 406 aaKnown RBP18.33■□□□□ 0.52
DDX41-212ENST00000511040 FKBP8Q14318 412 aa18.33■□□□□ 0.52
DDX41-212ENST00000511040 ZPR1O75312 459 aa18.32■□□□□ 0.52
DDX41-212ENST00000511040 USPL1Q5W0Q7 1092 aa18.32■□□□□ 0.52
DDX41-212ENST00000511040 NLGN1Q8N2Q7 840 aa18.32■□□□□ 0.52
DDX41-212ENST00000511040 NLGN2Q8NFZ4 835 aa18.32■□□□□ 0.52
DDX41-212ENST00000511040 EIF5P55010 431 aaKnown RBP18.31■□□□□ 0.52
DDX41-212ENST00000511040 GIGYF1O75420 1035 aaPredicted RBP18.3■□□□□ 0.52
DDX41-212ENST00000511040 NARFQ9UHQ1 456 aa18.3■□□□□ 0.52
DDX41-212ENST00000511040 TBC1D2BQ9UPU7 963 aa18.29■□□□□ 0.52
DDX41-212ENST00000511040 A0A087WZG4 1122 aa18.28■□□□□ 0.52
DDX41-212ENST00000511040 NBPF26B4DH59 902 aa18.28■□□□□ 0.52
DDX41-212ENST00000511040 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
DDX41-212ENST00000511040 NBPF10Q6P3W6 841 aaKnown RBP18.28■□□□□ 0.52
DDX41-212ENST00000511040 FAM9BQ8IZU0 186 aa18.28■□□□□ 0.52
DDX41-212ENST00000511040 NBPF15Q8N660 670 aa18.28■□□□□ 0.52
DDX41-212ENST00000511040 BCL2L12Q9HB09 334 aa18.28■□□□□ 0.52
DDX41-212ENST00000511040 CHL1O00533 1208 aa18.27■□□□□ 0.52
DDX41-212ENST00000511040 DDR1Q08345 913 aa18.27■□□□□ 0.52
DDX41-212ENST00000511040 PARP3Q9Y6F1 533 aa18.27■□□□□ 0.52
DDX41-212ENST00000511040 KRT24Q2M2I5 525 aa18.26■□□□□ 0.51
DDX41-212ENST00000511040 NPM2Q86SE8 214 aaKnown RBP18.26■□□□□ 0.51
DDX41-212ENST00000511040 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
DDX41-212ENST00000511040 CD2APQ9Y5K6 639 aa18.26■□□□□ 0.51
DDX41-212ENST00000511040 LAMB4A4D0S4 1761 aa18.26■□□□□ 0.51
DDX41-212ENST00000511040 NFIXQ14938 502 aa18.25■□□□□ 0.51
DDX41-212ENST00000511040 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
DDX41-212ENST00000511040 PELP1Q8IZL8 1130 aaKnown RBP18.25■□□□□ 0.51
DDX41-212ENST00000511040 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
DDX41-212ENST00000511040 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
DDX41-212ENST00000511040 EIF2S2P20042 333 aaKnown RBP18.24■□□□□ 0.51
DDX41-212ENST00000511040 TM4SF1P30408 202 aa18.24■□□□□ 0.51
DDX41-212ENST00000511040 DZIP3Q86Y13 1208 aaKnown RBP18.24■□□□□ 0.51
DDX41-212ENST00000511040 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
DDX41-212ENST00000511040 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
DDX41-212ENST00000511040 POLRMTO00411 1230 aaKnown RBP18.23■□□□□ 0.51
DDX41-212ENST00000511040 CAMTA2O94983 1202 aa18.23■□□□□ 0.51
DDX41-212ENST00000511040 MYL6BP14649 208 aa18.23■□□□□ 0.51
DDX41-212ENST00000511040 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
DDX41-212ENST00000511040 CFAP44Q96MT7 982 aa18.23■□□□□ 0.51
DDX41-212ENST00000511040 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
DDX41-212ENST00000511040 TBC1D9BQ66K14 1250 aa18.22■□□□□ 0.51
DDX41-212ENST00000511040 SCN7AQ01118 1682 aa18.22■□□□□ 0.51
DDX41-212ENST00000511040 CALD1Q05682 793 aaKnown RBP18.21■□□□□ 0.51
DDX41-212ENST00000511040 GPR162Q16538 588 aa18.21■□□□□ 0.51
DDX41-212ENST00000511040 IFT57Q9NWB7 429 aa18.21■□□□□ 0.51
DDX41-212ENST00000511040 ZNF853P0CG23 659 aa18.2■□□□□ 0.5
DDX41-212ENST00000511040 C10orf71Q711Q0 1435 aa18.2■□□□□ 0.5
DDX41-212ENST00000511040 ANXA1P04083 346 aa18.19■□□□□ 0.5
DDX41-212ENST00000511040 GNAI1P63096 354 aa18.19■□□□□ 0.5
DDX41-212ENST00000511040 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
DDX41-212ENST00000511040 WWC1Q8IX03 1113 aa18.19■□□□□ 0.5
DDX41-212ENST00000511040 BCORQ6W2J9 1755 aa18.18■□□□□ 0.5
DDX41-212ENST00000511040 A0A0G2JLW4 131 aa18.18■□□□□ 0.5
DDX41-212ENST00000511040 SERPINB2P05120 415 aa18.18■□□□□ 0.5
DDX41-212ENST00000511040 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.52e-8■□□□□ 9.6
DDX41-212ENST00000511040 TTLL7Q6ZT98 887 aa18.18■□□□□ 0.5
DDX41-212ENST00000511040 PDIA6Q15084 440 aa18.17■□□□□ 0.5
DDX41-212ENST00000511040 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
DDX41-212ENST00000511040 DUSP27Q5VZP5 1158 aa18.17■□□□□ 0.5
DDX41-212ENST00000511040 AFDNP55196 1824 aaKnown RBP18.16■□□□□ 0.5
DDX41-212ENST00000511040 KIF13BQ9NQT8 1826 aa18.16■□□□□ 0.5
DDX41-212ENST00000511040 PXDNLA1KZ92 1463 aa18.16■□□□□ 0.5
DDX41-212ENST00000511040 ELL2O00472 640 aaPredicted RBP18.16■□□□□ 0.5
DDX41-212ENST00000511040 DPEP1P16444 411 aa18.16■□□□□ 0.5
DDX41-212ENST00000511040 HLFQ16534 295 aa18.16■□□□□ 0.5
DDX41-212ENST00000511040 CCDC24Q8N4L8 307 aa18.16■□□□□ 0.5
DDX41-212ENST00000511040 TSR2Q969E8 191 aaKnown RBP18.16■□□□□ 0.5
DDX41-212ENST00000511040 N4BP2Q86UW6 1770 aaPredicted RBP18.16■□□□□ 0.5
DDX41-212ENST00000511040 ERBB4Q15303 1308 aa18.16■□□□□ 0.5
DDX41-212ENST00000511040 HDGFL1Q5TGJ6 251 aa18.15■□□□□ 0.5
DDX41-212ENST00000511040 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
DDX41-212ENST00000511040 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms