RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 COL15A1P39059 1388 aa13.74□□□□□ -0.21
PFDN1-203ENST00000510217 FCHSD2O94868 740 aa13.74□□□□□ -0.21
PFDN1-203ENST00000510217 VSIG10Q8N0Z9 540 aa13.74□□□□□ -0.21
PFDN1-203ENST00000510217 ZBTB1Q9Y2K1 713 aa13.74□□□□□ -0.21
PFDN1-203ENST00000510217 HEG1Q9ULI3 1381 aa13.73□□□□□ -0.21
PFDN1-203ENST00000510217 ZNF790Q6PG37 636 aa13.73□□□□□ -0.21
PFDN1-203ENST00000510217 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
PFDN1-203ENST00000510217 NLGN1Q8N2Q7 840 aa13.73□□□□□ -0.21
PFDN1-203ENST00000510217 ZNF496Q96IT1 587 aaPredicted RBP13.73□□□□□ -0.21
PFDN1-203ENST00000510217 NRXN2Q9P2S2 1712 aa13.73□□□□□ -0.21
PFDN1-203ENST00000510217 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
PFDN1-203ENST00000510217 LAMB4A4D0S4 1761 aa13.72□□□□□ -0.21
PFDN1-203ENST00000510217 BCORQ6W2J9 1755 aa13.72□□□□□ -0.21
PFDN1-203ENST00000510217 KDM3BQ7LBC6 1761 aa13.72□□□□□ -0.21
PFDN1-203ENST00000510217 AFDNP55196 1824 aaKnown RBP13.71□□□□□ -0.21
PFDN1-203ENST00000510217 FKBP8Q14318 412 aa13.71□□□□□ -0.21
PFDN1-203ENST00000510217 MCM10Q7L590 875 aa13.71□□□□□ -0.21
PFDN1-203ENST00000510217 KCNQ3O43525 872 aa13.7□□□□□ -0.22
PFDN1-203ENST00000510217 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
PFDN1-203ENST00000510217 DDR1Q08345 913 aa13.7□□□□□ -0.22
PFDN1-203ENST00000510217 DDX10Q13206 875 aaKnown RBP13.7□□□□□ -0.22
PFDN1-203ENST00000510217 ZNF784Q8NCA9 323 aaPredicted RBP13.7□□□□□ -0.22
PFDN1-203ENST00000510217 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
PFDN1-203ENST00000510217 BTBD11A6QL63 1104 aa13.69□□□□□ -0.22
PFDN1-203ENST00000510217 GRIN3BO60391 1043 aa13.69□□□□□ -0.22
PFDN1-203ENST00000510217 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
PFDN1-203ENST00000510217 RALBP1Q15311 655 aa13.69□□□□□ -0.22
PFDN1-203ENST00000510217 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
PFDN1-203ENST00000510217 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
PFDN1-203ENST00000510217 PARP3Q9Y6F1 533 aa13.69□□□□□ -0.22
PFDN1-203ENST00000510217 RTF1Q92541 710 aaKnown RBP13.68□□□□□ -0.22
PFDN1-203ENST00000510217 FMNL2Q96PY5 1086 aa13.68□□□□□ -0.22
PFDN1-203ENST00000510217 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
PFDN1-203ENST00000510217 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
PFDN1-203ENST00000510217 POLRMTO00411 1230 aaKnown RBP13.67□□□□□ -0.22
PFDN1-203ENST00000510217 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
PFDN1-203ENST00000510217 ZPR1O75312 459 aa13.67□□□□□ -0.22
PFDN1-203ENST00000510217 STARD3NLO95772 234 aa13.67□□□□□ -0.22
PFDN1-203ENST00000510217 CANXP27824 592 aaKnown RBP13.67□□□□□ -0.22
PFDN1-203ENST00000510217 TGFB2P61812 414 aa13.67□□□□□ -0.22
PFDN1-203ENST00000510217 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
PFDN1-203ENST00000510217 NARFQ9UHQ1 456 aa13.67□□□□□ -0.22
PFDN1-203ENST00000510217 MYBBP1AQ9BQG0 1328 aaKnown RBP13.66□□□□□ -0.22
PFDN1-203ENST00000510217 TM4SF1P30408 202 aa13.66□□□□□ -0.22
PFDN1-203ENST00000510217 EIF5P55010 431 aaKnown RBP13.66□□□□□ -0.22
PFDN1-203ENST00000510217 ADCY9O60503 1353 aa13.66□□□□□ -0.22
PFDN1-203ENST00000510217 PRAMEF22A3QJZ6 481 aa13.65□□□□□ -0.22
PFDN1-203ENST00000510217 NFIXQ14938 502 aa13.65□□□□□ -0.22
PFDN1-203ENST00000510217 TEX13AQ9BXU3 409 aaPredicted RBP13.65□□□□□ -0.22
PFDN1-203ENST00000510217 ANKRD31Q8N7Z5 1873 aa13.64□□□□□ -0.23
PFDN1-203ENST00000510217 A0A0G2JLW4 131 aa13.64□□□□□ -0.23
PFDN1-203ENST00000510217 NEFMP07197 916 aa13.64□□□□□ -0.23
PFDN1-203ENST00000510217 DPEP1P16444 411 aa13.64□□□□□ -0.23
PFDN1-203ENST00000510217 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
PFDN1-203ENST00000510217 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
PFDN1-203ENST00000510217 CARMIL3Q8ND23 1372 aa13.63□□□□□ -0.23
PFDN1-203ENST00000510217 A1BGP04217 495 aa13.63□□□□□ -0.23
PFDN1-203ENST00000510217 KCNA3P22001 575 aa13.63□□□□□ -0.23
PFDN1-203ENST00000510217 IL6STP40189 918 aaPredicted RBP13.63□□□□□ -0.23
PFDN1-203ENST00000510217 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
PFDN1-203ENST00000510217 COL11A2P13942 1736 aaPredicted RBP13.63□□□□□ -0.23
PFDN1-203ENST00000510217 A0A087WZG4 1122 aa13.62□□□□□ -0.23
PFDN1-203ENST00000510217 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
PFDN1-203ENST00000510217 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
PFDN1-203ENST00000510217 ZNF330Q9Y3S2 320 aaPredicted RBP13.62□□□□□ -0.23
PFDN1-203ENST00000510217 ATP10DQ9P241 1426 aa13.62□□□□□ -0.23
PFDN1-203ENST00000510217 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
PFDN1-203ENST00000510217 SNRPA1P09661 255 aaKnown RBP13.61□□□□□ -0.23
PFDN1-203ENST00000510217 PIP4K2AP48426 406 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-203ENST00000510217 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
PFDN1-203ENST00000510217 MIS18AQ9NYP9 233 aa13.61□□□□□ -0.23
PFDN1-203ENST00000510217 BCS1LQ9Y276 419 aa13.61□□□□□ -0.23
PFDN1-203ENST00000510217 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
PFDN1-203ENST00000510217 CHRNA5P30532 468 aa13.6□□□□□ -0.23
PFDN1-203ENST00000510217 TBC1D9BQ66K14 1250 aa13.6□□□□□ -0.23
PFDN1-203ENST00000510217 TBC1D2BQ9UPU7 963 aa13.6□□□□□ -0.23
PFDN1-203ENST00000510217 SERPINB2P05120 415 aa13.59□□□□□ -0.23
PFDN1-203ENST00000510217 BICDL1Q6ZP65 573 aa13.59□□□□□ -0.23
PFDN1-203ENST00000510217 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
PFDN1-203ENST00000510217 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
PFDN1-203ENST00000510217 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
PFDN1-203ENST00000510217 DZIP3Q86Y13 1208 aaKnown RBP13.58□□□□□ -0.24
PFDN1-203ENST00000510217 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
PFDN1-203ENST00000510217 PNISRQ8TF01 805 aaKnown RBP13.58□□□□□ -0.24
PFDN1-203ENST00000510217 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
PFDN1-203ENST00000510217 EIF4A1P60842 406 aaKnown RBP13.57□□□□□ -0.24
PFDN1-203ENST00000510217 CCDC146Q8IYE0 955 aa13.57□□□□□ -0.24
PFDN1-203ENST00000510217 PIM2Q9P1W9 311 aa13.57□□□□□ -0.24
PFDN1-203ENST00000510217 ARFGEF2Q9Y6D5 1785 aa13.57□□□□□ -0.24
PFDN1-203ENST00000510217 GIGYF1O75420 1035 aaPredicted RBP13.56□□□□□ -0.24
PFDN1-203ENST00000510217 RIPK4P57078 832 aa13.56□□□□□ -0.24
PFDN1-203ENST00000510217 SBF1O95248 1867 aa13.55□□□□□ -0.24
PFDN1-203ENST00000510217 CACNA1SQ13698 1873 aa13.55□□□□□ -0.24
PFDN1-203ENST00000510217 WDR43Q15061 677 aaKnown RBP eCLIP13.55□□□□□ -0.24
PFDN1-203ENST00000510217 DALRD3Q5D0E6 543 aaKnown RBP13.55□□□□□ -0.24
PFDN1-203ENST00000510217 PRR5LQ6MZQ0 368 aa13.55□□□□□ -0.24
PFDN1-203ENST00000510217 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
PFDN1-203ENST00000510217 RRP7AQ9Y3A4 280 aaKnown RBP13.55□□□□□ -0.24
PFDN1-203ENST00000510217 NUP98P52948 1817 aa13.55□□□□□ -0.24
PFDN1-203ENST00000510217 TNRC6CQ9HCJ0 1690 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms