RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 USPL1Q5W0Q7 1092 aa28.27■■■□□ 2.12
LIN54-208ENST00000509748 PLEKHF1Q96S99 279 aa28.27■■■□□ 2.12
LIN54-208ENST00000509748 COL15A1P39059 1388 aa28.26■■■□□ 2.12
LIN54-208ENST00000509748 BTBD11A6QL63 1104 aa28.26■■■□□ 2.11
LIN54-208ENST00000509748 HTATSF1O43719 755 aaKnown RBP28.26■■■□□ 2.11
LIN54-208ENST00000509748 DCTN1Q14203 1278 aa28.26■■■□□ 2.11
LIN54-208ENST00000509748 RALBP1Q15311 655 aa28.26■■■□□ 2.11
LIN54-208ENST00000509748 NARFQ9UHQ1 456 aa28.26■■■□□ 2.11
LIN54-208ENST00000509748 WWC3Q9ULE0 1092 aa28.26■■■□□ 2.11
LIN54-208ENST00000509748 STARD3NLO95772 234 aa28.25■■■□□ 2.11
LIN54-208ENST00000509748 EIF5P55010 431 aaKnown RBP28.25■■■□□ 2.11
LIN54-208ENST00000509748 TGFB2P61812 414 aa28.25■■■□□ 2.11
LIN54-208ENST00000509748 FMNL2Q96PY5 1086 aa28.25■■■□□ 2.11
LIN54-208ENST00000509748 BCL2L12Q9HB09 334 aa28.25■■■□□ 2.11
LIN54-208ENST00000509748 N4BP2Q86UW6 1770 aaPredicted RBP28.24■■■□□ 2.11
LIN54-208ENST00000509748 ZPR1O75312 459 aa28.24■■■□□ 2.11
LIN54-208ENST00000509748 CANXP27824 592 aaKnown RBP28.24■■■□□ 2.11
LIN54-208ENST00000509748 RTF1Q92541 710 aaKnown RBP28.24■■■□□ 2.11
LIN54-208ENST00000509748 TEX13AQ9BXU3 409 aaPredicted RBP28.24■■■□□ 2.11
LIN54-208ENST00000509748 A0A0G2JLW4 131 aa28.22■■■□□ 2.11
LIN54-208ENST00000509748 POLRMTO00411 1230 aaKnown RBP28.22■■■□□ 2.11
LIN54-208ENST00000509748 DLG5Q8TDM6 1919 aa28.22■■■□□ 2.11
LIN54-208ENST00000509748 DPEP1P16444 411 aa28.2■■■□□ 2.1
LIN54-208ENST00000509748 KCNA3P22001 575 aa28.19■■■□□ 2.1
LIN54-208ENST00000509748 NFIXQ14938 502 aa28.19■■■□□ 2.1
LIN54-208ENST00000509748 A1BGP04217 495 aa28.18■■■□□ 2.1
LIN54-208ENST00000509748 USP16Q9Y5T5 823 aa28.18■■■□□ 2.1
LIN54-208ENST00000509748 PRAMEF22A3QJZ6 481 aa28.17■■■□□ 2.1
LIN54-208ENST00000509748 BRCA1P38398 1863 aaKnown RBP28.17■■■□□ 2.1
LIN54-208ENST00000509748 IL6STP40189 918 aaPredicted RBP28.16■■■□□ 2.1
LIN54-208ENST00000509748 TAF7Q15545 349 aaPredicted RBP28.16■■■□□ 2.1
LIN54-208ENST00000509748 NFE2L2Q16236 605 aa28.16■■■□□ 2.1
LIN54-208ENST00000509748 AFDNP55196 1824 aaKnown RBP28.15■■■□□ 2.1
LIN54-208ENST00000509748 A0A087WZG4 1122 aa28.15■■■□□ 2.1
LIN54-208ENST00000509748 NRXN2Q9P2S2 1712 aa28.14■■■□□ 2.1
LIN54-208ENST00000509748 NEFMP07197 916 aa28.13■■■□□ 2.09
LIN54-208ENST00000509748 MIS18AQ9NYP9 233 aa28.13■■■□□ 2.09
LIN54-208ENST00000509748 MYBBP1AQ9BQG0 1328 aaKnown RBP28.13■■■□□ 2.09
LIN54-208ENST00000509748 SNRPA1P09661 255 aaKnown RBP28.12■■■□□ 2.09
LIN54-208ENST00000509748 PNNQ9H307 717 aaKnown RBP28.12■■■□□ 2.09
LIN54-208ENST00000509748 TBC1D2BQ9UPU7 963 aa28.12■■■□□ 2.09
LIN54-208ENST00000509748 BCS1LQ9Y276 419 aa28.11■■■□□ 2.09
LIN54-208ENST00000509748 SERPINB2P05120 415 aa28.1■■■□□ 2.09
LIN54-208ENST00000509748 THUMPD2Q9BTF0 503 aaKnown RBP28.1■■■□□ 2.09
LIN54-208ENST00000509748 ADCY9O60503 1353 aa28.1■■■□□ 2.09
LIN54-208ENST00000509748 CHRNA5P30532 468 aa28.09■■■□□ 2.09
LIN54-208ENST00000509748 PIP4K2AP48426 406 aaPredicted RBP28.09■■■□□ 2.09
LIN54-208ENST00000509748 SCN7AQ01118 1682 aa28.09■■■□□ 2.09
LIN54-208ENST00000509748 TBC1D9BQ66K14 1250 aa28.08■■■□□ 2.09
LIN54-208ENST00000509748 ZNF330Q9Y3S2 320 aaPredicted RBP28.08■■■□□ 2.09
LIN54-208ENST00000509748 KDM3BQ7LBC6 1761 aa28.07■■■□□ 2.08
LIN54-208ENST00000509748 CAMTA2O94983 1202 aa28.07■■■□□ 2.08
LIN54-208ENST00000509748 PIM2Q9P1W9 311 aa28.07■■■□□ 2.08
LIN54-208ENST00000509748 MAPK8IP3Q9UPT6 1336 aa28.07■■■□□ 2.08
LIN54-208ENST00000509748 NBPF26B4DH59 902 aa28.06■■■□□ 2.08
LIN54-208ENST00000509748 NBPF10Q6P3W6 841 aaKnown RBP28.06■■■□□ 2.08
LIN54-208ENST00000509748 BICDL1Q6ZP65 573 aa28.06■■■□□ 2.08
LIN54-208ENST00000509748 NBPF15Q8N660 670 aa28.06■■■□□ 2.08
LIN54-208ENST00000509748 ATP10DQ9P241 1426 aa28.06■■■□□ 2.08
LIN54-208ENST00000509748 ARFGEF1Q9Y6D6 1849 aa28.06■■■□□ 2.08
LIN54-208ENST00000509748 PNISRQ8TF01 805 aaKnown RBP28.05■■■□□ 2.08
LIN54-208ENST00000509748 CARMIL3Q8ND23 1372 aa28.03■■■□□ 2.08
LIN54-208ENST00000509748 EIF4A1P60842 406 aaKnown RBP28.03■■■□□ 2.08
LIN54-208ENST00000509748 DZIP3Q86Y13 1208 aaKnown RBP28.03■■■□□ 2.08
LIN54-208ENST00000509748 PRKRIP1Q9H875 184 aaPredicted RBP28.03■■■□□ 2.08
LIN54-208ENST00000509748 BCORQ6W2J9 1755 aa28.02■■■□□ 2.08
LIN54-208ENST00000509748 DALRD3Q5D0E6 543 aaKnown RBP28.02■■■□□ 2.08
LIN54-208ENST00000509748 GIGYF1O75420 1035 aaPredicted RBP28.01■■■□□ 2.07
LIN54-208ENST00000509748 TMPOP42166 694 aaKnown RBP28.01■■■□□ 2.07
LIN54-208ENST00000509748 RIPK4P57078 832 aa28.01■■■□□ 2.07
LIN54-208ENST00000509748 ARHGAP27Q6ZUM4 889 aa28.01■■■□□ 2.07
LIN54-208ENST00000509748 NPM2Q86SE8 214 aaKnown RBP27.99■■■□□ 2.07
LIN54-208ENST00000509748 LAMB4A4D0S4 1761 aa27.99■■■□□ 2.07
LIN54-208ENST00000509748 ANKRD31Q8N7Z5 1873 aa27.98■■■□□ 2.07
LIN54-208ENST00000509748 PRR5LQ6MZQ0 368 aa27.98■■■□□ 2.07
LIN54-208ENST00000509748 DLEC1Q9Y238 1755 aa27.97■■■□□ 2.07
LIN54-208ENST00000509748 CCDC146Q8IYE0 955 aa27.97■■■□□ 2.07
LIN54-208ENST00000509748 C1QTNF8P60827 252 aa27.96■■■□□ 2.07
LIN54-208ENST00000509748 CLEC4GQ6UXB4 293 aa27.96■■■□□ 2.07
LIN54-208ENST00000509748 SETDB2Q96T68 719 aa27.96■■■□□ 2.07
LIN54-208ENST00000509748 ADAMTS8Q9UP79 889 aa27.96■■■□□ 2.07
LIN54-208ENST00000509748 C2CD5Q86YS7 1000 aa27.95■■■□□ 2.06
LIN54-208ENST00000509748 CCDC24Q8N4L8 307 aa27.95■■■□□ 2.06
LIN54-208ENST00000509748 RRP7AQ9Y3A4 280 aaKnown RBP27.95■■■□□ 2.06
LIN54-208ENST00000509748 BRIP1Q9BX63 1249 aa27.94■■■□□ 2.06
LIN54-208ENST00000509748 RGL2O15211 777 aa27.93■■■□□ 2.06
LIN54-208ENST00000509748 ZEB1P37275 1124 aaPredicted RBP27.93■■■□□ 2.06
LIN54-208ENST00000509748 RUNDC1Q96C34 613 aa27.93■■■□□ 2.06
LIN54-208ENST00000509748 WDR43Q15061 677 aaKnown RBP eCLIP27.92■■■□□ 2.06
LIN54-208ENST00000509748 GPBP1L1Q9HC44 474 aaPredicted RBP27.92■■■□□ 2.06
LIN54-208ENST00000509748 H0YIN7 160 aa27.91■■■□□ 2.06
LIN54-208ENST00000509748 LMOD3Q0VAK6 560 aa27.91■■■□□ 2.06
LIN54-208ENST00000509748 ZNF526Q8TF50 670 aaPredicted RBP27.91■■■□□ 2.06
LIN54-208ENST00000509748 BABAM1Q9NWV8 329 aa27.91■■■□□ 2.06
LIN54-208ENST00000509748 TSPYL4Q9UJ04 414 aa27.91■■■□□ 2.06
LIN54-208ENST00000509748 TRIM35Q9UPQ4 493 aa27.91■■■□□ 2.06
LIN54-208ENST00000509748 HLFQ16534 295 aa27.9■■■□□ 2.06
LIN54-208ENST00000509748 TTLL6Q8N841 843 aa27.9■■■□□ 2.06
LIN54-208ENST00000509748 SBF1O95248 1867 aa27.89■■■□□ 2.06
LIN54-208ENST00000509748 PDE6BP35913 854 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms