RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 PRRT3Q5FWE3 981 aa3.48□□□□□ -1.85
CAST-226ENST00000509529 CCDC125Q86Z20 511 aa3.48□□□□□ -1.85
CAST-226ENST00000509529 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.48□□□□□ -1.85
CAST-226ENST00000509529 ZBBXA8MT70 800 aa3.47□□□□□ -1.85
CAST-226ENST00000509529 TRIM26Q12899 539 aaPredicted RBP3.47□□□□□ -1.85
CAST-226ENST00000509529 RNF20Q5VTR2 975 aa3.47□□□□□ -1.85
CAST-226ENST00000509529 FIGNL1Q6PIW4 674 aa3.47□□□□□ -1.85
CAST-226ENST00000509529 MAPTP10636 758 aaKnown RBP3.47□□□□□ -1.85
CAST-226ENST00000509529 TRIM34Q9BYJ4 488 aa3.47□□□□□ -1.85
CAST-226ENST00000509529 AVENQ9NQS1 362 aaPredicted RBP3.47□□□□□ -1.85
CAST-226ENST00000509529 SPDYE3A6NKU9 549 aa3.47□□□□□ -1.85
CAST-226ENST00000509529 ATP4AP20648 1035 aa3.47□□□□□ -1.85
CAST-226ENST00000509529 GRIK4Q16099 956 aa3.47□□□□□ -1.85
CAST-226ENST00000509529 FAM182BQ5T319 152 aa3.47□□□□□ -1.85
CAST-226ENST00000509529 ZNF468Q5VIY5 522 aaPredicted RBP3.47□□□□□ -1.85
CAST-226ENST00000509529 ATXN7O15265 892 aaPredicted RBP3.46□□□□□ -1.86
CAST-226ENST00000509529 H2AFB1P0C5Y9 115 aa3.46□□□□□ -1.86
CAST-226ENST00000509529 H2AFB2P0C5Z0 115 aa3.46□□□□□ -1.86
CAST-226ENST00000509529 GTF2E1P29083 439 aaPredicted RBP3.46□□□□□ -1.86
CAST-226ENST00000509529 RHBDD1Q8TEB9 315 aa3.46□□□□□ -1.86
CAST-226ENST00000509529 XAGE2Q96GT9 111 aa3.46□□□□□ -1.86
CAST-226ENST00000509529 ESF1Q9H501 851 aaKnown RBP3.46□□□□□ -1.86
CAST-226ENST00000509529 TNP2Q05952 138 aa3.46□□□□□ -1.86
CAST-226ENST00000509529 COL9A3Q14050 684 aaPredicted RBP3.46□□□□□ -1.86
CAST-226ENST00000509529 CENPBP07199 599 aaPredicted RBP3.45□□□□□ -1.86
CAST-226ENST00000509529 PLA2G4AP47712 749 aa3.45□□□□□ -1.86
CAST-226ENST00000509529 SKIV2LQ15477 1246 aaKnown RBP3.45□□□□□ -1.86
CAST-226ENST00000509529 ELOA3CA0A087WX78 387 aaPredicted RBP3.45□□□□□ -1.86
CAST-226ENST00000509529 ELOA3DA6NLF2 546 aaPredicted RBP3.45□□□□□ -1.86
CAST-226ENST00000509529 KHNYNO15037 678 aaKnown RBP3.45□□□□□ -1.86
CAST-226ENST00000509529 STAU1O95793 577 aaKnown RBP3.45□□□□□ -1.86
CAST-226ENST00000509529 ELOA3BQ3SY89 546 aa3.45□□□□□ -1.86
CAST-226ENST00000509529 TBC1D9Q6ZT07 1266 aa3.45□□□□□ -1.86
CAST-226ENST00000509529 NLRP8Q86W28 1048 aa3.45□□□□□ -1.86
CAST-226ENST00000509529 PPARGC1BQ86YN6 1023 aaKnown RBP3.45□□□□□ -1.86
CAST-226ENST00000509529 ELOA3Q8NG57 546 aa3.45□□□□□ -1.86
CAST-226ENST00000509529 NACC1Q96RE7 527 aa3.45□□□□□ -1.86
CAST-226ENST00000509529 MDFIQ99750 246 aa3.45□□□□□ -1.86
CAST-226ENST00000509529 PRR12Q9ULL5 1215 aa3.44□□□□□ -1.86
CAST-226ENST00000509529 M0R082 166 aa3.44□□□□□ -1.86
CAST-226ENST00000509529 YBX3P16989 372 aaKnown RBP eCLIP3.44□□□□□ -1.86
CAST-226ENST00000509529 MBTPS1Q14703 1052 aa3.44□□□□□ -1.86
CAST-226ENST00000509529 C8orf86Q6ZUL3 223 aa3.44□□□□□ -1.86
CAST-226ENST00000509529 ZNF417Q8TAU3 575 aa3.44□□□□□ -1.86
CAST-226ENST00000509529 ZNF587Q96SQ5 575 aaPredicted RBP3.44□□□□□ -1.86
CAST-226ENST00000509529 CDCA7Q9BWT1 371 aaPredicted RBP3.44□□□□□ -1.86
CAST-226ENST00000509529 ATP1B4Q9UN42 357 aaPredicted RBP3.44□□□□□ -1.86
CAST-226ENST00000509529 TRIM28Q13263 835 aaKnown RBP3.43□□□□□ -1.86
CAST-226ENST00000509529 TLR1Q15399 786 aa3.43□□□□□ -1.86
CAST-226ENST00000509529 SH3D19Q5HYK7 790 aa3.43□□□□□ -1.86
CAST-226ENST00000509529 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
CAST-226ENST00000509529 STRN4Q9NRL3 753 aa3.43□□□□□ -1.86
CAST-226ENST00000509529 COL17A1Q9UMD9 1497 aaPredicted RBP3.43□□□□□ -1.86
CAST-226ENST00000509529 PAX4O43316 350 aa3.43□□□□□ -1.86
CAST-226ENST00000509529 ADGRE1Q14246 886 aa3.43□□□□□ -1.86
CAST-226ENST00000509529 ETNK1Q9HBU6 452 aa3.43□□□□□ -1.86
CAST-226ENST00000509529 A0A1W2PNR3 127 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 ALBP02768 609 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 ELNP15502 786 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 SELPP16109 830 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 FMNL2Q96PY5 1086 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 FAM157BP0CG42 384 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 NID1P14543 1247 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 ALAS2P22557 587 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 TXKP42681 527 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 ESCO1Q5FWF5 840 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 SYT9Q86SS6 491 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 TXNRD3Q86VQ6 643 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 C1orf216Q8TAB5 229 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 AIDAQ96BJ3 306 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 STARD13Q9Y3M8 1113 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 ERCC6L2Q5T890 1561 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 MYCP01106 439 aaPredicted RBP3.42□□□□□ -1.86
CAST-226ENST00000509529 ARSJQ5FYB0 599 aaPredicted RBP3.42□□□□□ -1.86
CAST-226ENST00000509529 TP53INP1Q96A56 240 aa3.42□□□□□ -1.86
CAST-226ENST00000509529 CCDC85AQ96PX6 553 aaPredicted RBP3.42□□□□□ -1.86
CAST-226ENST00000509529 C9orf172C9J069 976 aa3.41□□□□□ -1.86
CAST-226ENST00000509529 PRDM6Q9NQX0 595 aa3.41□□□□□ -1.86
CAST-226ENST00000509529 MARK1Q9P0L2 795 aa3.41□□□□□ -1.86
CAST-226ENST00000509529 PRKCSHP14314 528 aaPredicted RBP3.41□□□□□ -1.86
CAST-226ENST00000509529 RFC5P40937 340 aa3.41□□□□□ -1.86
CAST-226ENST00000509529 MICALL1Q8N3F8 863 aa3.41□□□□□ -1.86
CAST-226ENST00000509529 GJD4Q96KN9 370 aaPredicted RBP3.41□□□□□ -1.86
CAST-226ENST00000509529 BCL11AQ9H165 835 aa3.41□□□□□ -1.86
CAST-226ENST00000509529 RNF112Q9ULX5 631 aa3.41□□□□□ -1.86
CAST-226ENST00000509529 EFSO43281 561 aa3.4□□□□□ -1.86
CAST-226ENST00000509529 NR1H3Q13133 447 aa3.4□□□□□ -1.86
CAST-226ENST00000509529 SHISA2Q6UWI4 295 aa3.4□□□□□ -1.86
CAST-226ENST00000509529 WRNQ14191 1432 aaPredicted RBP eCLIP3.4□□□□□ -1.86
CAST-226ENST00000509529 MCCD1P59942 119 aaPredicted RBP3.4□□□□□ -1.87
CAST-226ENST00000509529 SSBP4Q9BWG4 385 aaPredicted RBP3.4□□□□□ -1.87
CAST-226ENST00000509529 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
CAST-226ENST00000509529 SLC24A3Q9HC58 644 aa3.4□□□□□ -1.87
CAST-226ENST00000509529 ADARB2-AS1A8MUL3 147 aa3.4□□□□□ -1.87
CAST-226ENST00000509529 SIN3BO75182 1162 aa3.4□□□□□ -1.87
CAST-226ENST00000509529 NRG1Q02297 640 aaPredicted RBP3.4□□□□□ -1.87
CAST-226ENST00000509529 VSIG10Q8N0Z9 540 aa3.4□□□□□ -1.87
CAST-226ENST00000509529 LMTK3Q96Q04 1460 aa3.39□□□□□ -1.87
CAST-226ENST00000509529 ZNF295-AS1Q8N0V1 137 aa3.39□□□□□ -1.87
CAST-226ENST00000509529 ZIC5Q96T25 663 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms