RNA–Protein interactions for RNA: ENST00000509148.1

RACK1-221, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-221ENST00000509148 FMNL2Q96PY5 1086 aa13.3□□□□□ -0.28
RACK1-221ENST00000509148 NARFQ9UHQ1 456 aa13.3□□□□□ -0.28
RACK1-221ENST00000509148 ZBTB1Q9Y2K1 713 aa13.3□□□□□ -0.28
RACK1-221ENST00000509148 TJP1Q07157 1748 aa13.3□□□□□ -0.28
RACK1-221ENST00000509148 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
RACK1-221ENST00000509148 MYH14Q7Z406 1995 aaKnown RBP13.29□□□□□ -0.28
RACK1-221ENST00000509148 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
RACK1-221ENST00000509148 KCNA4P22459 653 aa13.29□□□□□ -0.28
RACK1-221ENST00000509148 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
RACK1-221ENST00000509148 C1QTNF8P60827 252 aa13.29□□□□□ -0.28
RACK1-221ENST00000509148 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
RACK1-221ENST00000509148 ZNF496Q96IT1 587 aaPredicted RBP13.29□□□□□ -0.28
RACK1-221ENST00000509148 BCS1LQ9Y276 419 aa13.29□□□□□ -0.28
RACK1-221ENST00000509148 COL15A1P39059 1388 aa13.29□□□□□ -0.28
RACK1-221ENST00000509148 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
RACK1-221ENST00000509148 HEG1Q9ULI3 1381 aa13.29□□□□□ -0.28
RACK1-221ENST00000509148 C4AP0C0L4 1744 aa13.28□□□□□ -0.28
RACK1-221ENST00000509148 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
RACK1-221ENST00000509148 DPEP1P16444 411 aa13.28□□□□□ -0.28
RACK1-221ENST00000509148 TM4SF1P30408 202 aa13.28□□□□□ -0.28
RACK1-221ENST00000509148 DDR1Q08345 913 aa13.28□□□□□ -0.28
RACK1-221ENST00000509148 POLRMTO00411 1230 aaKnown RBP13.27□□□□□ -0.29
RACK1-221ENST00000509148 PIM2Q9P1W9 311 aa13.27□□□□□ -0.29
RACK1-221ENST00000509148 EIF5P55010 431 aaKnown RBP13.26□□□□□ -0.29
RACK1-221ENST00000509148 PNNQ9H307 717 aaKnown RBP13.26□□□□□ -0.29
RACK1-221ENST00000509148 GPBP1L1Q9HC44 474 aaPredicted RBP13.26□□□□□ -0.29
RACK1-221ENST00000509148 ATP10DQ9P241 1426 aa13.26□□□□□ -0.29
RACK1-221ENST00000509148 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
RACK1-221ENST00000509148 NFIXQ14938 502 aa13.25□□□□□ -0.29
RACK1-221ENST00000509148 DALRD3Q5D0E6 543 aaKnown RBP13.25□□□□□ -0.29
RACK1-221ENST00000509148 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
RACK1-221ENST00000509148 MCM10Q7L590 875 aa13.25□□□□□ -0.29
RACK1-221ENST00000509148 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
RACK1-221ENST00000509148 ADCY9O60503 1353 aa13.24□□□□□ -0.29
RACK1-221ENST00000509148 KCNA3P22001 575 aa13.24□□□□□ -0.29
RACK1-221ENST00000509148 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
RACK1-221ENST00000509148 UBR2Q8IWV8 1755 aa13.23□□□□□ -0.29
RACK1-221ENST00000509148 SERPINB2P05120 415 aa13.23□□□□□ -0.29
RACK1-221ENST00000509148 SNRPA1P09661 255 aaKnown RBP13.23□□□□□ -0.29
RACK1-221ENST00000509148 RALBP1Q15311 655 aa13.23□□□□□ -0.29
RACK1-221ENST00000509148 BCL2L12Q9HB09 334 aa13.23□□□□□ -0.29
RACK1-221ENST00000509148 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
RACK1-221ENST00000509148 KCNQ3O43525 872 aa13.22□□□□□ -0.29
RACK1-221ENST00000509148 A1BGP04217 495 aa13.22□□□□□ -0.29
RACK1-221ENST00000509148 TAF7Q15545 349 aaPredicted RBP13.22□□□□□ -0.29
RACK1-221ENST00000509148 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
RACK1-221ENST00000509148 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.29
RACK1-221ENST00000509148 CHRNA5P30532 468 aa13.21□□□□□ -0.29
RACK1-221ENST00000509148 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
RACK1-221ENST00000509148 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.29
RACK1-221ENST00000509148 ZNF526Q8TF50 670 aaPredicted RBP13.21□□□□□ -0.29
RACK1-221ENST00000509148 PDZRN3Q9UPQ7 1066 aa13.21□□□□□ -0.29
RACK1-221ENST00000509148 TBC1D2BQ9UPU7 963 aa13.21□□□□□ -0.29
RACK1-221ENST00000509148 MAPK8IP3Q9UPT6 1336 aa13.2□□□□□ -0.3
RACK1-221ENST00000509148 KIAA1551Q9HCM1 1747 aa13.2□□□□□ -0.3
RACK1-221ENST00000509148 SETDB2Q96T68 719 aa13.2□□□□□ -0.3
RACK1-221ENST00000509148 USP16Q9Y5T5 823 aa13.2□□□□□ -0.3
RACK1-221ENST00000509148 N4BP2Q86UW6 1770 aaPredicted RBP13.2□□□□□ -0.3
RACK1-221ENST00000509148 H0YIN7 160 aa13.19□□□□□ -0.3
RACK1-221ENST00000509148 NFE2L2Q16236 605 aa13.19□□□□□ -0.3
RACK1-221ENST00000509148 TBC1D9BQ66K14 1250 aa13.19□□□□□ -0.3
RACK1-221ENST00000509148 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
RACK1-221ENST00000509148 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
RACK1-221ENST00000509148 SIPA1L3O60292 1781 aaPredicted RBP13.19□□□□□ -0.3
RACK1-221ENST00000509148 CARMIL3Q8ND23 1372 aa13.19□□□□□ -0.3
RACK1-221ENST00000509148 NPHP1O15259 732 aa13.18□□□□□ -0.3
RACK1-221ENST00000509148 CAMTA2O94983 1202 aa13.18□□□□□ -0.3
RACK1-221ENST00000509148 PDE6BP35913 854 aa13.18□□□□□ -0.3
RACK1-221ENST00000509148 CLEC4GQ6UXB4 293 aa13.18□□□□□ -0.3
RACK1-221ENST00000509148 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
RACK1-221ENST00000509148 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
RACK1-221ENST00000509148 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
RACK1-221ENST00000509148 ZNF652Q9Y2D9 606 aa13.18□□□□□ -0.3
RACK1-221ENST00000509148 RGL2O15211 777 aa13.17□□□□□ -0.3
RACK1-221ENST00000509148 DDX10Q13206 875 aaKnown RBP13.17□□□□□ -0.3
RACK1-221ENST00000509148 C9orf131Q5VYM1 1079 aa13.17□□□□□ -0.3
RACK1-221ENST00000509148 PRAMEF22A3QJZ6 481 aa13.16□□□□□ -0.3
RACK1-221ENST00000509148 ST5P78524 1137 aa13.16□□□□□ -0.3
RACK1-221ENST00000509148 CNBD1Q8NA66 436 aa13.16□□□□□ -0.3
RACK1-221ENST00000509148 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
RACK1-221ENST00000509148 PRR5LQ6MZQ0 368 aa13.15□□□□□ -0.3
RACK1-221ENST00000509148 RNF181Q9P0P0 153 aa13.15□□□□□ -0.3
RACK1-221ENST00000509148 MYBBP1AQ9BQG0 1328 aaKnown RBP13.14□□□□□ -0.31
RACK1-221ENST00000509148 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
RACK1-221ENST00000509148 KIF3CO14782 793 aa13.14□□□□□ -0.31
RACK1-221ENST00000509148 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
RACK1-221ENST00000509148 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
RACK1-221ENST00000509148 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.31
RACK1-221ENST00000509148 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
RACK1-221ENST00000509148 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
RACK1-221ENST00000509148 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
RACK1-221ENST00000509148 NBPF26B4DH59 902 aa13.13□□□□□ -0.31
RACK1-221ENST00000509148 RIPK4P57078 832 aa13.13□□□□□ -0.31
RACK1-221ENST00000509148 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
RACK1-221ENST00000509148 NBPF10Q6P3W6 841 aaKnown RBP13.13□□□□□ -0.31
RACK1-221ENST00000509148 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
RACK1-221ENST00000509148 NBPF15Q8N660 670 aa13.13□□□□□ -0.31
RACK1-221ENST00000509148 ARFGEF1Q9Y6D6 1849 aa13.13□□□□□ -0.31
RACK1-221ENST00000509148 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
RACK1-221ENST00000509148 LMNB1P20700 586 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms