RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 PGBD3Q8N328 593 aa9.84□□□□□ -0.83
UBE2D3-225ENST00000508476 TSPAN10Q9H1Z9 355 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-225ENST00000508476 LGR5O75473 907 aa9.83□□□□□ -0.84
UBE2D3-225ENST00000508476 ZNF385CQ66K41 422 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-225ENST00000508476 TRERF1Q96PN7 1200 aa9.83□□□□□ -0.84
UBE2D3-225ENST00000508476 CRISPLD1Q9H336 500 aa9.83□□□□□ -0.84
UBE2D3-225ENST00000508476 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
UBE2D3-225ENST00000508476 SRSF11Q05519 484 aaKnown RBP9.82□□□□□ -0.84
UBE2D3-225ENST00000508476 PTK7Q13308 1070 aa9.82□□□□□ -0.84
UBE2D3-225ENST00000508476 CDCA8Q53HL2 280 aa9.82□□□□□ -0.84
UBE2D3-225ENST00000508476 L3MBTL2Q969R5 705 aa9.82□□□□□ -0.84
UBE2D3-225ENST00000508476 IGF1RP08069 1367 aa9.81□□□□□ -0.84
UBE2D3-225ENST00000508476 RFX1P22670 979 aa9.81□□□□□ -0.84
UBE2D3-225ENST00000508476 NBPF1Q3BBV0 1214 aa9.81□□□□□ -0.84
UBE2D3-225ENST00000508476 EFHC2Q5JST6 749 aa9.81□□□□□ -0.84
UBE2D3-225ENST00000508476 LARP1Q6PKG0 1096 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-225ENST00000508476 LYPD4Q6UWN0 246 aa9.81□□□□□ -0.84
UBE2D3-225ENST00000508476 KLRG1Q96E93 195 aa9.81□□□□□ -0.84
UBE2D3-225ENST00000508476 VRTNQ9H8Y1 702 aa9.81□□□□□ -0.84
UBE2D3-225ENST00000508476 A0A1W2PNR3 127 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L15C9J2P7 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L10C9JJH3 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L13C9JLJ4 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L12C9JPN9 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L11C9JVI0 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L21D6R901 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L18D6R9N7 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L22D6RA61 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L17D6RBQ6 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L19D6RCP7 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L20D6RJB6 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 BNIP3LO60238 219 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 NOS2P35228 1153 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 USP17L24Q0WX57 530 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 DPYDQ12882 1025 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 TEAD4Q15561 434 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 ARSJQ5FYB0 599 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 SVOPQ8N4V2 548 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 C1orf216Q8TAB5 229 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 ABHD17AQ96GS6 310 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 ZNF232Q9UNY5 417 aa9.8□□□□□ -0.84
UBE2D3-225ENST00000508476 FAM181BA6NEQ2 426 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 M0R2N6 131 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 C21orf2O43822 256 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 MX2P20592 715 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 SEC13P55735 322 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 LBRQ14739 615 aaKnown RBP9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 ZIC5Q96T25 663 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 NDFIP2Q9NV92 336 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 ZDHHC3Q9NYG2 299 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 HCN2Q9UL51 889 aa9.79□□□□□ -0.84
UBE2D3-225ENST00000508476 EML1O00423 815 aa9.78□□□□□ -0.84
UBE2D3-225ENST00000508476 TATP17735 454 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-225ENST00000508476 CFHR5Q9BXR6 569 aa9.78□□□□□ -0.84
UBE2D3-225ENST00000508476 ZCCHC2Q9C0B9 1178 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-225ENST00000508476 RBM19Q9Y4C8 960 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-225ENST00000508476 SERTM1A2A2V5 107 aa9.77□□□□□ -0.85
UBE2D3-225ENST00000508476 ARID3CA6NKF2 412 aa9.77□□□□□ -0.85
UBE2D3-225ENST00000508476 FAM196BA6NMK8 535 aa9.77□□□□□ -0.85
UBE2D3-225ENST00000508476 ANKMY2Q8IV38 441 aa9.77□□□□□ -0.85
UBE2D3-225ENST00000508476 ARXQ96QS3 562 aa9.77□□□□□ -0.85
UBE2D3-225ENST00000508476 CELA2BP08218 269 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-225ENST00000508476 BICDL1Q6ZP65 573 aa9.76□□□□□ -0.85
UBE2D3-225ENST00000508476 ACDQ96AP0 544 aa9.76□□□□□ -0.85
UBE2D3-225ENST00000508476 DCDC2BA2VCK2 349 aa9.75□□□□□ -0.85
UBE2D3-225ENST00000508476 ARHGEF15O94989 841 aa9.75□□□□□ -0.85
UBE2D3-225ENST00000508476 PSMA6P60900 246 aaKnown RBP9.75□□□□□ -0.85
UBE2D3-225ENST00000508476 CTBSQ01459 385 aa9.75□□□□□ -0.85
UBE2D3-225ENST00000508476 NLRP8Q86W28 1048 aa9.75□□□□□ -0.85
UBE2D3-225ENST00000508476 C7orf43Q8WVR3 580 aa9.75□□□□□ -0.85
UBE2D3-225ENST00000508476 SCG3Q8WXD2 468 aaKnown RBP9.75□□□□□ -0.85
UBE2D3-225ENST00000508476 ATXN7L1Q9ULK2 861 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-225ENST00000508476 HCN4Q9Y3Q4 1203 aa9.75□□□□□ -0.85
UBE2D3-225ENST00000508476 C2CD2LO14523 706 aa9.74□□□□□ -0.85
UBE2D3-225ENST00000508476 ATXN7O15265 892 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-225ENST00000508476 PPP1R12BO60237 982 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-225ENST00000508476 HINFPQ9BQA5 517 aa9.74□□□□□ -0.85
UBE2D3-225ENST00000508476 ADAMTS8Q9UP79 889 aa9.74□□□□□ -0.85
UBE2D3-225ENST00000508476 PHF24Q9UPV7 400 aa9.74□□□□□ -0.85
UBE2D3-225ENST00000508476 PCDHGC4Q9Y5F7 938 aa9.74□□□□□ -0.85
UBE2D3-225ENST00000508476 ATAD2Q6PL18 1390 aa9.74□□□□□ -0.85
UBE2D3-225ENST00000508476 FGFR3P22607 806 aa9.73□□□□□ -0.85
UBE2D3-225ENST00000508476 FIGNL1Q6PIW4 674 aa9.73□□□□□ -0.85
UBE2D3-225ENST00000508476 POTEAQ6S8J7 498 aa9.73□□□□□ -0.85
UBE2D3-225ENST00000508476 LRRC69Q6ZNQ3 347 aa9.73□□□□□ -0.85
UBE2D3-225ENST00000508476 CHMP7Q8WUX9 453 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-225ENST00000508476 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-225ENST00000508476 PHACTR1Q9C0D0 580 aa9.72□□□□□ -0.85
UBE2D3-225ENST00000508476 KHNYNO15037 678 aaKnown RBP9.71□□□□□ -0.86
UBE2D3-225ENST00000508476 MAPTP10636 758 aaKnown RBP9.71□□□□□ -0.86
UBE2D3-225ENST00000508476 HIRAP54198 1017 aaPredicted RBP9.71□□□□□ -0.86
UBE2D3-225ENST00000508476 SRPK2P78362 688 aaKnown RBP9.71□□□□□ -0.86
UBE2D3-225ENST00000508476 TNP2Q05952 138 aa9.71□□□□□ -0.86
UBE2D3-225ENST00000508476 GJA3Q9Y6H8 435 aa9.71□□□□□ -0.86
UBE2D3-225ENST00000508476 BMP4P12644 408 aa9.7□□□□□ -0.86
UBE2D3-225ENST00000508476 CD33P20138 364 aa9.7□□□□□ -0.86
UBE2D3-225ENST00000508476 MAP2K3P46734 347 aa9.7□□□□□ -0.86
UBE2D3-225ENST00000508476 RHPN1Q8TCX5 695 aa9.7□□□□□ -0.86
UBE2D3-225ENST00000508476 C2orf49Q9BVC5 232 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms