RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 GIGYF1O75420 1035 aaPredicted RBP26.93■■□□□ 1.9
SPCS3-203ENST00000507678 CWF19L2Q2TBE0 894 aaKnown RBP26.93■■□□□ 1.9
SPCS3-203ENST00000507678 RHPN1Q8TCX5 695 aa26.93■■□□□ 1.9
SPCS3-203ENST00000507678 C19orf44Q9H6X5 657 aa26.93■■□□□ 1.9
SPCS3-203ENST00000507678 AK9Q5TCS8 1911 aa26.93■■□□□ 1.9
SPCS3-203ENST00000507678 ADAMTSL3P82987 1691 aa26.93■■□□□ 1.9
SPCS3-203ENST00000507678 HOXB7P09629 217 aa26.93■■□□□ 1.9
SPCS3-203ENST00000507678 CHMLP26374 656 aa26.93■■□□□ 1.9
SPCS3-203ENST00000507678 NEK4P51957 841 aa26.93■■□□□ 1.9
SPCS3-203ENST00000507678 PKP1Q13835 747 aa26.93■■□□□ 1.9
SPCS3-203ENST00000507678 C9orf78Q9NZ63 289 aaPredicted RBP26.93■■□□□ 1.9
SPCS3-203ENST00000507678 ADCY9O60503 1353 aa26.92■■□□□ 1.9
SPCS3-203ENST00000507678 PXDNLA1KZ92 1463 aa26.92■■□□□ 1.9
SPCS3-203ENST00000507678 L1TD1Q5T7N2 865 aaKnown RBP26.91■■□□□ 1.9
SPCS3-203ENST00000507678 ATF3P18847 181 aa26.91■■□□□ 1.9
SPCS3-203ENST00000507678 PALD1Q9ULE6 856 aa26.91■■□□□ 1.9
SPCS3-203ENST00000507678 CSB-PGBD3P0DP91 1061 aa26.9■■□□□ 1.9
SPCS3-203ENST00000507678 MED1Q15648 1581 aaPredicted RBP26.9■■□□□ 1.9
SPCS3-203ENST00000507678 CHRNA2Q15822 529 aa26.9■■□□□ 1.9
SPCS3-203ENST00000507678 RAPGEF4Q8WZA2 1011 aa26.9■■□□□ 1.9
SPCS3-203ENST00000507678 C1orf167Q5SNV9 1468 aa26.9■■□□□ 1.9
SPCS3-203ENST00000507678 ERBB3P21860 1342 aa26.9■■□□□ 1.9
SPCS3-203ENST00000507678 IL25Q9H293 177 aa26.89■■□□□ 1.9
SPCS3-203ENST00000507678 POLA2Q14181 598 aa26.89■■□□□ 1.89
SPCS3-203ENST00000507678 FAM43AQ8N2R8 423 aa26.89■■□□□ 1.89
SPCS3-203ENST00000507678 PANK2Q9BZ23 570 aa26.88■■□□□ 1.89
SPCS3-203ENST00000507678 STAP2Q9UGK3 403 aa26.88■■□□□ 1.89
SPCS3-203ENST00000507678 FOXD4L5Q5VV16 416 aaPredicted RBP26.88■■□□□ 1.89
SPCS3-203ENST00000507678 FOXD4L4Q8WXT5 416 aaPredicted RBP26.88■■□□□ 1.89
SPCS3-203ENST00000507678 XRCC6P12956 609 aaKnown RBP eCLIP26.87■■□□□ 1.89
SPCS3-203ENST00000507678 PA2G4Q9UQ80 394 aaKnown RBP26.87■■□□□ 1.89
SPCS3-203ENST00000507678 MYL6BP14649 208 aa26.87■■□□□ 1.89
SPCS3-203ENST00000507678 KDM3BQ7LBC6 1761 aa26.87■■□□□ 1.89
SPCS3-203ENST00000507678 KIF1BPQ96EK5 621 aa26.86■■□□□ 1.89
SPCS3-203ENST00000507678 SLIT3O75094 1523 aa26.86■■□□□ 1.89
SPCS3-203ENST00000507678 RAB11FIP3O75154 756 aa26.86■■□□□ 1.89
SPCS3-203ENST00000507678 CHMP4AQ9BY43 222 aa26.86■■□□□ 1.89
SPCS3-203ENST00000507678 LMO7Q8WWI1 1683 aa26.85■■□□□ 1.89
SPCS3-203ENST00000507678 PIP4K2AP48426 406 aaPredicted RBP26.85■■□□□ 1.89
SPCS3-203ENST00000507678 UPF3BQ9BZI7 483 aaKnown RBP26.85■■□□□ 1.89
SPCS3-203ENST00000507678 MCCP23508 829 aa26.84■■□□□ 1.89
SPCS3-203ENST00000507678 MCTP1Q6DN14 999 aa26.84■■□□□ 1.89
SPCS3-203ENST00000507678 NFATC2IPQ8NCF5 419 aa26.84■■□□□ 1.89
SPCS3-203ENST00000507678 BAG4O95429 457 aaKnown RBP26.84■■□□□ 1.89
SPCS3-203ENST00000507678 KSR2Q6VAB6 950 aa26.84■■□□□ 1.89
SPCS3-203ENST00000507678 RGPD5Q99666 1765 aa26.84■■□□□ 1.89
SPCS3-203ENST00000507678 GOLGA6L22H0YM25 854 aa26.83■■□□□ 1.88
SPCS3-203ENST00000507678 PI4K2BQ8TCG2 481 aa26.83■■□□□ 1.88
SPCS3-203ENST00000507678 TMEM94Q12767 1356 aa26.82■■□□□ 1.88
SPCS3-203ENST00000507678 CHAMP1Q96JM3 812 aa26.82■■□□□ 1.88
SPCS3-203ENST00000507678 FSD2A1L4K1 749 aa26.82■■□□□ 1.88
SPCS3-203ENST00000507678 NCAPD2Q15021 1401 aa26.8■■□□□ 1.88
SPCS3-203ENST00000507678 TATP17735 454 aaPredicted RBP26.8■■□□□ 1.88
SPCS3-203ENST00000507678 ZNF790Q6PG37 636 aa26.8■■□□□ 1.88
SPCS3-203ENST00000507678 PHRF1Q9P1Y6 1649 aaKnown RBP26.8■■□□□ 1.88
SPCS3-203ENST00000507678 NCLP19338 710 aaKnown RBP26.8■■□□□ 1.88
SPCS3-203ENST00000507678 TMX3Q96JJ7 454 aa26.8■■□□□ 1.88
SPCS3-203ENST00000507678 NUCB2P80303 420 aa26.79■■□□□ 1.88
SPCS3-203ENST00000507678 RIC3Q7Z5B4 369 aa26.79■■□□□ 1.88
SPCS3-203ENST00000507678 HYPKQ9NX55 129 aa26.79■■□□□ 1.88
SPCS3-203ENST00000507678 DDX49Q9Y6V7 483 aaKnown RBP26.79■■□□□ 1.88
SPCS3-203ENST00000507678 CWC27Q6UX04 472 aaKnown RBP26.79■■□□□ 1.88
SPCS3-203ENST00000507678 TRPM3Q9HCF6 1732 aaPredicted RBP26.78■■□□□ 1.88
SPCS3-203ENST00000507678 JARID2Q92833 1246 aaPredicted RBP26.78■■□□□ 1.88
SPCS3-203ENST00000507678 NPHP3Q7Z494 1330 aa26.78■■□□□ 1.88
SPCS3-203ENST00000507678 N4BP2Q86UW6 1770 aaPredicted RBP26.77■■□□□ 1.88
SPCS3-203ENST00000507678 HSPA2P54652 639 aa26.77■■□□□ 1.88
SPCS3-203ENST00000507678 SIL1Q9H173 461 aa26.77■■□□□ 1.88
SPCS3-203ENST00000507678 CLASRPQ8N2M8 674 aaKnown RBP26.77■■□□□ 1.88
SPCS3-203ENST00000507678 SUCLG2Q96I99 432 aa26.77■■□□□ 1.88
SPCS3-203ENST00000507678 SLC52A2Q9HAB3 445 aa26.77■■□□□ 1.88
SPCS3-203ENST00000507678 HSP90AB4PQ58FF6 505 aa26.76■■□□□ 1.87
SPCS3-203ENST00000507678 CNTROBQ8N137 903 aa26.76■■□□□ 1.87
SPCS3-203ENST00000507678 DDX21Q9NR30 783 aaKnown RBP eCLIP26.76■■□□□ 1.87
SPCS3-203ENST00000507678 DDX58O95786 925 aaKnown RBP26.76■■□□□ 1.87
SPCS3-203ENST00000507678 PHKG2P15735 406 aa26.76■■□□□ 1.87
SPCS3-203ENST00000507678 SPG7Q9UQ90 795 aa26.76■■□□□ 1.87
SPCS3-203ENST00000507678 AOX1Q06278 1338 aa26.76■■□□□ 1.87
SPCS3-203ENST00000507678 GRM8O00222 908 aa26.75■■□□□ 1.87
SPCS3-203ENST00000507678 ALDH1L1O75891 902 aa26.75■■□□□ 1.87
SPCS3-203ENST00000507678 SKOR2Q2VWA4 1001 aaPredicted RBP26.75■■□□□ 1.87
SPCS3-203ENST00000507678 BICC1Q9H694 974 aaKnown RBP26.75■■□□□ 1.87
SPCS3-203ENST00000507678 PDIA6Q15084 440 aa26.75■■□□□ 1.87
SPCS3-203ENST00000507678 GAS2L3Q86XJ1 694 aa26.75■■□□□ 1.87
SPCS3-203ENST00000507678 ZNF496Q96IT1 587 aaPredicted RBP26.75■■□□□ 1.87
SPCS3-203ENST00000507678 CWC22Q9HCG8 908 aaKnown RBP26.75■■□□□ 1.87
SPCS3-203ENST00000507678 KLHDC4Q8TBB5 520 aa26.74■■□□□ 1.87
SPCS3-203ENST00000507678 GRPEL1Q9HAV7 217 aa26.74■■□□□ 1.87
SPCS3-203ENST00000507678 LINS1Q8NG48 757 aa26.74■■□□□ 1.87
SPCS3-203ENST00000507678 XAGE3Q8WTP9 111 aa26.74■■□□□ 1.87
SPCS3-203ENST00000507678 HEG1Q9ULI3 1381 aa26.74■■□□□ 1.87
SPCS3-203ENST00000507678 IFIT2P09913 472 aaKnown RBP26.73■■□□□ 1.87
SPCS3-203ENST00000507678 LARP6Q9BRS8 491 aaKnown RBP26.73■■□□□ 1.87
SPCS3-203ENST00000507678 COPS6Q7L5N1 327 aa26.73■■□□□ 1.87
SPCS3-203ENST00000507678 AACSQ86V21 672 aa26.73■■□□□ 1.87
SPCS3-203ENST00000507678 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.73■■□□□ 1.87
SPCS3-203ENST00000507678 TUBGCP6Q96RT7 1819 aa26.73■■□□□ 1.87
SPCS3-203ENST00000507678 KDM6AO15550 1401 aaPredicted RBP26.73■■□□□ 1.87
SPCS3-203ENST00000507678 MST1RQ04912 1400 aa26.73■■□□□ 1.87
SPCS3-203ENST00000507678 ZDHHC9Q9Y397 364 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms