RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 ZNF468Q5VIY5 522 aaPredicted RBP7.65□□□□□ -1.18
RFC1-208ENST00000504849 XAGE2Q96GT9 111 aa7.65□□□□□ -1.18
RFC1-208ENST00000504849 GTF3C3Q9Y5Q9 886 aa7.65□□□□□ -1.18
RFC1-208ENST00000504849 MAPTP10636 758 aaKnown RBP7.64□□□□□ -1.19
RFC1-208ENST00000504849 GNASQ5JWF2 1037 aa7.64□□□□□ -1.19
RFC1-208ENST00000504849 FIGNL1Q6PIW4 674 aa7.64□□□□□ -1.19
RFC1-208ENST00000504849 PCDHB9Q9Y5E1 797 aa7.64□□□□□ -1.19
RFC1-208ENST00000504849 ATP4AP20648 1035 aa7.63□□□□□ -1.19
RFC1-208ENST00000504849 FZD5Q13467 585 aa7.63□□□□□ -1.19
RFC1-208ENST00000504849 ADGRE1Q14246 886 aa7.63□□□□□ -1.19
RFC1-208ENST00000504849 NACC1Q96RE7 527 aa7.63□□□□□ -1.19
RFC1-208ENST00000504849 DCDC2BA2VCK2 349 aa7.62□□□□□ -1.19
RFC1-208ENST00000504849 ATXN7O15265 892 aaPredicted RBP7.62□□□□□ -1.19
RFC1-208ENST00000504849 ELNP15502 786 aa7.62□□□□□ -1.19
RFC1-208ENST00000504849 MBTPS1Q14703 1052 aa7.62□□□□□ -1.19
RFC1-208ENST00000504849 PNMA1Q8ND90 353 aa7.62□□□□□ -1.19
RFC1-208ENST00000504849 ELOA3CA0A087WX78 387 aaPredicted RBP7.61□□□□□ -1.19
RFC1-208ENST00000504849 ELOA3DA6NLF2 546 aaPredicted RBP7.61□□□□□ -1.19
RFC1-208ENST00000504849 ELOA3BQ3SY89 546 aa7.61□□□□□ -1.19
RFC1-208ENST00000504849 TMEM214Q6NUQ4 689 aaKnown RBP7.61□□□□□ -1.19
RFC1-208ENST00000504849 NLRP8Q86W28 1048 aa7.61□□□□□ -1.19
RFC1-208ENST00000504849 ELOA3Q8NG57 546 aa7.61□□□□□ -1.19
RFC1-208ENST00000504849 PCDHB11Q9Y5F2 797 aa7.61□□□□□ -1.19
RFC1-208ENST00000504849 RSPH6AQ9H0K4 717 aa7.6□□□□□ -1.19
RFC1-208ENST00000504849 PRDM6Q9NQX0 595 aa7.6□□□□□ -1.19
RFC1-208ENST00000504849 RNF112Q9ULX5 631 aa7.6□□□□□ -1.19
RFC1-208ENST00000504849 STARD13Q9Y3M8 1113 aa7.6□□□□□ -1.19
RFC1-208ENST00000504849 AP1G2O75843 785 aa7.59□□□□□ -1.19
RFC1-208ENST00000504849 SELPP16109 830 aa7.59□□□□□ -1.19
RFC1-208ENST00000504849 RNF20Q5VTR2 975 aa7.59□□□□□ -1.19
RFC1-208ENST00000504849 C8orf86Q6ZUL3 223 aa7.59□□□□□ -1.19
RFC1-208ENST00000504849 RHBDD1Q8TEB9 315 aa7.59□□□□□ -1.19
RFC1-208ENST00000504849 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.59□□□□□ -1.19
RFC1-208ENST00000504849 SSBP4Q9BWG4 385 aaPredicted RBP7.59□□□□□ -1.19
RFC1-208ENST00000504849 TRIM34Q9BYJ4 488 aa7.59□□□□□ -1.19
RFC1-208ENST00000504849 ZBBXA8MT70 800 aa7.58□□□□□ -1.2
RFC1-208ENST00000504849 M0R082 166 aa7.58□□□□□ -1.2
RFC1-208ENST00000504849 FBXO45P0C2W1 286 aa7.58□□□□□ -1.2
RFC1-208ENST00000504849 NID1P14543 1247 aa7.58□□□□□ -1.2
RFC1-208ENST00000504849 PDE4DQ08499 809 aa7.58□□□□□ -1.2
RFC1-208ENST00000504849 TRIM28Q13263 835 aaKnown RBP7.58□□□□□ -1.2
RFC1-208ENST00000504849 PPARGC1BQ86YN6 1023 aaKnown RBP7.58□□□□□ -1.2
RFC1-208ENST00000504849 ZNF417Q8TAU3 575 aa7.58□□□□□ -1.2
RFC1-208ENST00000504849 ZNF587Q96SQ5 575 aaPredicted RBP7.58□□□□□ -1.2
RFC1-208ENST00000504849 STRN4Q9NRL3 753 aa7.58□□□□□ -1.2
RFC1-208ENST00000504849 USP17L8P0C7I0 530 aa7.57□□□□□ -1.2
RFC1-208ENST00000504849 TXNRD3Q86VQ6 643 aa7.57□□□□□ -1.2
RFC1-208ENST00000504849 AK7Q96M32 723 aa7.57□□□□□ -1.2
RFC1-208ENST00000504849 C9orf172C9J069 976 aa7.56□□□□□ -1.2
RFC1-208ENST00000504849 KHNYNO15037 678 aaKnown RBP7.56□□□□□ -1.2
RFC1-208ENST00000504849 TMEM132AQ24JP5 1023 aa7.56□□□□□ -1.2
RFC1-208ENST00000504849 TBC1D9Q6ZT07 1266 aa7.56□□□□□ -1.2
RFC1-208ENST00000504849 PROCA1Q8NCQ7 364 aaPredicted RBP7.56□□□□□ -1.2
RFC1-208ENST00000504849 ALBP02768 609 aa7.55□□□□□ -1.2
RFC1-208ENST00000504849 PLA2G4AP47712 749 aa7.55□□□□□ -1.2
RFC1-208ENST00000504849 TP53INP1Q96A56 240 aa7.55□□□□□ -1.2
RFC1-208ENST00000504849 STAU1O95793 577 aaKnown RBP7.54□□□□□ -1.2
RFC1-208ENST00000504849 FAM157BP0CG42 384 aa7.54□□□□□ -1.2
RFC1-208ENST00000504849 GTF2E1P29083 439 aaPredicted RBP7.54□□□□□ -1.2
RFC1-208ENST00000504849 MICALL1Q8N3F8 863 aa7.54□□□□□ -1.2
RFC1-208ENST00000504849 KRTAP4-11Q9BYQ6 195 aa7.54□□□□□ -1.2
RFC1-208ENST00000504849 PRR12Q9ULL5 1215 aa7.54□□□□□ -1.2
RFC1-208ENST00000504849 A0A1W2PNR3 127 aa7.53□□□□□ -1.2
RFC1-208ENST00000504849 ADARB2-AS1A8MUL3 147 aa7.53□□□□□ -1.2
RFC1-208ENST00000504849 EFSO43281 561 aa7.53□□□□□ -1.2
RFC1-208ENST00000504849 SYT9Q86SS6 491 aa7.53□□□□□ -1.2
RFC1-208ENST00000504849 C1orf216Q8TAB5 229 aa7.53□□□□□ -1.2
RFC1-208ENST00000504849 ALAS2P22557 587 aa7.52□□□□□ -1.21
RFC1-208ENST00000504849 NRG1Q02297 640 aaPredicted RBP7.52□□□□□ -1.21
RFC1-208ENST00000504849 HOMEZQ8IX15 550 aa7.52□□□□□ -1.21
RFC1-208ENST00000504849 LENG1Q96BZ8 264 aaPredicted RBP7.52□□□□□ -1.21
RFC1-208ENST00000504849 CDCA7Q9BWT1 371 aaPredicted RBP7.52□□□□□ -1.21
RFC1-208ENST00000504849 KRTAP17-1Q9BYP8 105 aa7.52□□□□□ -1.21
RFC1-208ENST00000504849 SKIV2LQ15477 1246 aaKnown RBP7.51□□□□□ -1.21
RFC1-208ENST00000504849 SHISA2Q6UWI4 295 aa7.51□□□□□ -1.21
RFC1-208ENST00000504849 ETNK1Q9HBU6 452 aa7.51□□□□□ -1.21
RFC1-208ENST00000504849 LAMC2Q13753 1193 aa7.5□□□□□ -1.21
RFC1-208ENST00000504849 C20orf204Q6ZNR8 217 aa7.5□□□□□ -1.21
RFC1-208ENST00000504849 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
RFC1-208ENST00000504849 ESF1Q9H501 851 aaKnown RBP7.5□□□□□ -1.21
RFC1-208ENST00000504849 MARK1Q9P0L2 795 aa7.5□□□□□ -1.21
RFC1-208ENST00000504849 SIN3BO75182 1162 aa7.49□□□□□ -1.21
RFC1-208ENST00000504849 TAL1P17542 331 aaPredicted RBP7.49□□□□□ -1.21
RFC1-208ENST00000504849 TLR1Q15399 786 aa7.49□□□□□ -1.21
RFC1-208ENST00000504849 CCDC85AQ96PX6 553 aaPredicted RBP7.49□□□□□ -1.21
RFC1-208ENST00000504849 PCMTD2Q9NV79 361 aa7.49□□□□□ -1.21
RFC1-208ENST00000504849 NISCHQ9Y2I1 1504 aa7.48□□□□□ -1.21
RFC1-208ENST00000504849 A0A0A0MRY4 1105 aa7.48□□□□□ -1.21
RFC1-208ENST00000504849 ESCO1Q5FWF5 840 aa7.48□□□□□ -1.21
RFC1-208ENST00000504849 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
RFC1-208ENST00000504849 SAMD5Q5TGI4 173 aa7.48□□□□□ -1.21
RFC1-208ENST00000504849 TNFRSF25Q93038 417 aa7.48□□□□□ -1.21
RFC1-208ENST00000504849 ZIC5Q96T25 663 aa7.48□□□□□ -1.21
RFC1-208ENST00000504849 IRAK1P51617 712 aa7.47□□□□□ -1.21
RFC1-208ENST00000504849 SH3D19Q5HYK7 790 aa7.47□□□□□ -1.21
RFC1-208ENST00000504849 RNF114Q9Y508 228 aa7.47□□□□□ -1.21
RFC1-208ENST00000504849 MCCD1P59942 119 aaPredicted RBP7.46□□□□□ -1.22
RFC1-208ENST00000504849 JAG1P78504 1218 aa7.46□□□□□ -1.22
RFC1-208ENST00000504849 OAS3Q9Y6K5 1087 aaKnown RBP7.46□□□□□ -1.22
RFC1-208ENST00000504849 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms