RNA–Protein interactions for RNA: ENST00000504524.5

PLXND1-204, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,701 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-204ENST00000504524 MEIS3Q99687 375 aa23.15■■□□□ 1.3
PLXND1-204ENST00000504524 KAT6BQ8WYB5 2073 aa23.14■■□□□ 1.3
PLXND1-204ENST00000504524 ARFGEF2Q9Y6D5 1785 aa23.14■■□□□ 1.3
PLXND1-204ENST00000504524 UNC5CLQ8IV45 518 aa23.14■■□□□ 1.3
PLXND1-204ENST00000504524 DDX21Q9NR30 783 aaKnown RBP eCLIP23.14■■□□□ 1.3
PLXND1-204ENST00000504524 EXOC5O00471 708 aa23.13■■□□□ 1.29
PLXND1-204ENST00000504524 BARGINQ6ZT62 677 aa23.13■■□□□ 1.29
PLXND1-204ENST00000504524 SIRT2Q8IXJ6 389 aa23.13■■□□□ 1.29
PLXND1-204ENST00000504524 SMC5Q8IY18 1101 aa23.13■■□□□ 1.29
PLXND1-204ENST00000504524 HSPA1LP34931 641 aa23.12■■□□□ 1.29
PLXND1-204ENST00000504524 C8orf37Q96NL8 207 aa23.12■■□□□ 1.29
PLXND1-204ENST00000504524 HYPKQ9NX55 129 aa23.12■■□□□ 1.29
PLXND1-204ENST00000504524 PDZRN3Q9UPQ7 1066 aa23.12■■□□□ 1.29
PLXND1-204ENST00000504524 NUP188Q5SRE5 1749 aa23.11■■□□□ 1.29
PLXND1-204ENST00000504524 TMOD3Q9NYL9 352 aa23.11■■□□□ 1.29
PLXND1-204ENST00000504524 USP16Q9Y5T5 823 aa23.11■■□□□ 1.29
PLXND1-204ENST00000504524 THSD7AQ9UPZ6 1657 aa23.11■■□□□ 1.29
PLXND1-204ENST00000504524 BCL9O00512 1426 aa23.11■■□□□ 1.29
PLXND1-204ENST00000504524 LRP10Q7Z4F1 713 aa23.11■■□□□ 1.29
PLXND1-204ENST00000504524 FNBP4Q8N3X1 1017 aaPredicted RBP23.11■■□□□ 1.29
PLXND1-204ENST00000504524 VPS72Q15906 364 aa23.1■■□□□ 1.29
PLXND1-204ENST00000504524 AFDNP55196 1824 aaKnown RBP23.1■■□□□ 1.29
PLXND1-204ENST00000504524 TJP1Q07157 1748 aa23.09■■□□□ 1.29
PLXND1-204ENST00000504524 DNAAF4Q8WXU2 420 aa23.09■■□□□ 1.29
PLXND1-204ENST00000504524 NGLY1Q96IV0 654 aa23.09■■□□□ 1.29
PLXND1-204ENST00000504524 PI4KAP2A4QPH2 592 aa23.08■■□□□ 1.29
PLXND1-204ENST00000504524 ANKRD44Q8N8A2 993 aa23.08■■□□□ 1.29
PLXND1-204ENST00000504524 PI4KAP1Q8N8J0 262 aa23.08■■□□□ 1.29
PLXND1-204ENST00000504524 PIGBQ92521 554 aa23.08■■□□□ 1.29
PLXND1-204ENST00000504524 RGS3P49796 1198 aa23.08■■□□□ 1.28
PLXND1-204ENST00000504524 DDB1Q16531 1140 aa23.08■■□□□ 1.28
PLXND1-204ENST00000504524 CEP85Q6P2H3 762 aa23.08■■□□□ 1.28
PLXND1-204ENST00000504524 BEND3Q5T5X7 828 aa23.07■■□□□ 1.28
PLXND1-204ENST00000504524 KSR2Q6VAB6 950 aa23.06■■□□□ 1.28
PLXND1-204ENST00000504524 CCDC9Q9Y3X0 531 aaKnown RBP23.06■■□□□ 1.28
PLXND1-204ENST00000504524 ERBB4Q15303 1308 aa23.06■■□□□ 1.28
PLXND1-204ENST00000504524 CICQ96RK0 1608 aaPredicted RBP23.05■■□□□ 1.28
PLXND1-204ENST00000504524 RPAP2Q8IXW5 612 aaPredicted RBP23.05■■□□□ 1.28
PLXND1-204ENST00000504524 SRCIN1Q9C0H9 1055 aa23.05■■□□□ 1.28
PLXND1-204ENST00000504524 USP44Q9H0E7 712 aa23.05■■□□□ 1.28
PLXND1-204ENST00000504524 ATG3Q9NT62 314 aa23.05■■□□□ 1.28
PLXND1-204ENST00000504524 ASAP1Q9ULH1 1129 aa23.05■■□□□ 1.28
PLXND1-204ENST00000504524 MAP3K2Q9Y2U5 619 aa23.05■■□□□ 1.28
PLXND1-204ENST00000504524 GNAI3P08754 354 aa23.04■■□□□ 1.28
PLXND1-204ENST00000504524 MARCH10Q8NA82 808 aaPredicted RBP23.04■■□□□ 1.28
PLXND1-204ENST00000504524 RBM19Q9Y4C8 960 aaKnown RBP23.04■■□□□ 1.28
PLXND1-204ENST00000504524 MYL6BP14649 208 aa23.03■■□□□ 1.28
PLXND1-204ENST00000504524 GCC1Q96CN9 775 aa23.03■■□□□ 1.28
PLXND1-204ENST00000504524 PTCD1O75127 700 aaKnown RBP23.02■■□□□ 1.28
PLXND1-204ENST00000504524 XAGE3Q8WTP9 111 aa23.02■■□□□ 1.28
PLXND1-204ENST00000504524 NBPF26B4DH59 902 aa23.02■■□□□ 1.28
PLXND1-204ENST00000504524 DDX58O95786 925 aaKnown RBP23.02■■□□□ 1.28
PLXND1-204ENST00000504524 GNAI2P04899 355 aa23.02■■□□□ 1.28
PLXND1-204ENST00000504524 PIP4K2AP48426 406 aaPredicted RBP23.02■■□□□ 1.28
PLXND1-204ENST00000504524 NUCB1Q02818 461 aa23.02■■□□□ 1.28
PLXND1-204ENST00000504524 NBPF14Q5TI25 921 aa23.02■■□□□ 1.28
PLXND1-204ENST00000504524 NBPF10Q6P3W6 841 aaKnown RBP23.02■■□□□ 1.28
PLXND1-204ENST00000504524 NBPF15Q8N660 670 aa23.02■■□□□ 1.28
PLXND1-204ENST00000504524 PDE4AP27815 886 aa23.01■■□□□ 1.27
PLXND1-204ENST00000504524 USP21Q9UK80 565 aa23.01■■□□□ 1.27
PLXND1-204ENST00000504524 AIMP1Q12904 312 aaKnown RBP23■■□□□ 1.27
PLXND1-204ENST00000504524 IBTKQ9P2D0 1353 aaPredicted RBP23■■□□□ 1.27
PLXND1-204ENST00000504524 ALDH1L1O75891 902 aa22.99■■□□□ 1.27
PLXND1-204ENST00000504524 FAM98CQ17RN3 349 aaKnown RBP22.99■■□□□ 1.27
PLXND1-204ENST00000504524 COPS6Q7L5N1 327 aa22.99■■□□□ 1.27
PLXND1-204ENST00000504524 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
PLXND1-204ENST00000504524 DCTPP1Q9H773 170 aa22.99■■□□□ 1.27
PLXND1-204ENST00000504524 PRIM1P49642 420 aaKnown RBP22.98■■□□□ 1.27
PLXND1-204ENST00000504524 BACH2Q9BYV9 841 aa22.98■■□□□ 1.27
PLXND1-204ENST00000504524 LRRFIP2Q9Y608 721 aaKnown RBP22.98■■□□□ 1.27
PLXND1-204ENST00000504524 RREB1Q92766 1687 aa22.98■■□□□ 1.27
PLXND1-204ENST00000504524 UBTFL1P0CB47 393 aaPredicted RBP22.97■■□□□ 1.27
PLXND1-204ENST00000504524 ATRNO75882 1429 aa22.97■■□□□ 1.27
PLXND1-204ENST00000504524 ZNF831Q5JPB2 1677 aa22.97■■□□□ 1.27
PLXND1-204ENST00000504524 CHD1LQ86WJ1 897 aa22.96■■□□□ 1.27
PLXND1-204ENST00000504524 LINS1Q8NG48 757 aa22.96■■□□□ 1.27
PLXND1-204ENST00000504524 A1BGP04217 495 aa22.96■■□□□ 1.27
PLXND1-204ENST00000504524 DNAJC10Q8IXB1 793 aa22.96■■□□□ 1.27
PLXND1-204ENST00000504524 SLC4A9Q96Q91 983 aa22.96■■□□□ 1.27
PLXND1-204ENST00000504524 NHSQ6T4R5 1651 aa22.96■■□□□ 1.27
PLXND1-204ENST00000504524 SBF2Q86WG5 1849 aa22.95■■□□□ 1.26
PLXND1-204ENST00000504524 NBPF7P0C2Y1 421 aaPredicted RBP22.95■■□□□ 1.26
PLXND1-204ENST00000504524 MEX3CQ5U5Q3 659 aaKnown RBP22.95■■□□□ 1.26
PLXND1-204ENST00000504524 RIC3Q7Z5B4 369 aa22.95■■□□□ 1.26
PLXND1-204ENST00000504524 METTL22Q9BUU2 404 aaPredicted RBP22.95■■□□□ 1.26
PLXND1-204ENST00000504524 COL5A3P25940 1745 aaPredicted RBP22.95■■□□□ 1.26
PLXND1-204ENST00000504524 AFF2P51816 1311 aa22.94■■□□□ 1.26
PLXND1-204ENST00000504524 IGKV5-2P06315 115 aa22.94■■□□□ 1.26
PLXND1-204ENST00000504524 ATP8B2P98198 1209 aa22.94■■□□□ 1.26
PLXND1-204ENST00000504524 CWF19L2Q2TBE0 894 aaKnown RBP22.94■■□□□ 1.26
PLXND1-204ENST00000504524 SYTL4Q96C24 671 aaPredicted RBP22.94■■□□□ 1.26
PLXND1-204ENST00000504524 HMMRO75330 724 aa22.94■■□□□ 1.26
PLXND1-204ENST00000504524 C8orf34Q49A92 452 aa22.94■■□□□ 1.26
PLXND1-204ENST00000504524 ANKRD13DQ6ZTN6 518 aa22.94■■□□□ 1.26
PLXND1-204ENST00000504524 TEX13AQ9BXU3 409 aaPredicted RBP22.94■■□□□ 1.26
PLXND1-204ENST00000504524 LNPKQ9C0E8 428 aa22.94■■□□□ 1.26
PLXND1-204ENST00000504524 BTAF1O14981 1849 aa22.93■■□□□ 1.26
PLXND1-204ENST00000504524 ANKRD36CQ5JPF3 1778 aa22.93■■□□□ 1.26
PLXND1-204ENST00000504524 UTYO14607 1347 aa22.93■■□□□ 1.26
PLXND1-204ENST00000504524 ANKRD45Q5TZF3 282 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms