RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 USP17L19D6RCP7 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L20D6RJB6 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 ATP4AP20648 1035 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 FOXK2Q01167 660 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L24Q0WX57 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 TSEN2Q8NCE0 465 aaKnown RBP7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 ZDHHC1Q8WTX9 485 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 GMCL1Q96IK5 515 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 ARID3CA6NKF2 412 aa7.46□□□□□ -1.22
PDLIM1P4-201ENST00000504327 RFX1P22670 979 aa7.46□□□□□ -1.22
PDLIM1P4-201ENST00000504327 PTK7Q13308 1070 aa7.46□□□□□ -1.22
PDLIM1P4-201ENST00000504327 LARP1Q6PKG0 1096 aaKnown RBP7.46□□□□□ -1.22
PDLIM1P4-201ENST00000504327 ZSCAN1Q8NBB4 408 aa7.46□□□□□ -1.22
PDLIM1P4-201ENST00000504327 AIDAQ96BJ3 306 aa7.46□□□□□ -1.22
PDLIM1P4-201ENST00000504327 TSPAN10Q9H1Z9 355 aaPredicted RBP7.46□□□□□ -1.22
PDLIM1P4-201ENST00000504327 CSB-PGBD3P0DP91 1061 aa7.45□□□□□ -1.22
PDLIM1P4-201ENST00000504327 CDCA8Q53HL2 280 aa7.45□□□□□ -1.22
PDLIM1P4-201ENST00000504327 SH3PXD2AQ5TCZ1 1133 aa7.45□□□□□ -1.22
PDLIM1P4-201ENST00000504327 PGBD3Q8N328 593 aa7.45□□□□□ -1.22
PDLIM1P4-201ENST00000504327 VRTNQ9H8Y1 702 aa7.45□□□□□ -1.22
PDLIM1P4-201ENST00000504327 RBM19Q9Y4C8 960 aaKnown RBP7.45□□□□□ -1.22
PDLIM1P4-201ENST00000504327 FAM196BA6NMK8 535 aa7.44□□□□□ -1.22
PDLIM1P4-201ENST00000504327 LGR5O75473 907 aa7.44□□□□□ -1.22
PDLIM1P4-201ENST00000504327 TXLNAP40222 546 aa7.44□□□□□ -1.22
PDLIM1P4-201ENST00000504327 DPYDQ12882 1025 aa7.44□□□□□ -1.22
PDLIM1P4-201ENST00000504327 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
PDLIM1P4-201ENST00000504327 M0R2N6 131 aa7.43□□□□□ -1.22
PDLIM1P4-201ENST00000504327 SEC13P55735 322 aa7.43□□□□□ -1.22
PDLIM1P4-201ENST00000504327 UBAP2LQ14157 1087 aaKnown RBP7.43□□□□□ -1.22
PDLIM1P4-201ENST00000504327 FOXR1Q6PIV2 292 aa7.43□□□□□ -1.22
PDLIM1P4-201ENST00000504327 TRERF1Q96PN7 1200 aa7.43□□□□□ -1.22
PDLIM1P4-201ENST00000504327 CRISPLD1Q9H336 500 aa7.43□□□□□ -1.22
PDLIM1P4-201ENST00000504327 ZNF232Q9UNY5 417 aa7.43□□□□□ -1.22
PDLIM1P4-201ENST00000504327 TATP17735 454 aaPredicted RBP7.42□□□□□ -1.22
PDLIM1P4-201ENST00000504327 TEAD4Q15561 434 aa7.42□□□□□ -1.22
PDLIM1P4-201ENST00000504327 EFHC2Q5JST6 749 aa7.42□□□□□ -1.22
PDLIM1P4-201ENST00000504327 ANKMY2Q8IV38 441 aa7.42□□□□□ -1.22
PDLIM1P4-201ENST00000504327 C1orf216Q8TAB5 229 aa7.42□□□□□ -1.22
PDLIM1P4-201ENST00000504327 L3MBTL2Q969R5 705 aa7.42□□□□□ -1.22
PDLIM1P4-201ENST00000504327 ZDHHC3Q9NYG2 299 aa7.42□□□□□ -1.22
PDLIM1P4-201ENST00000504327 STK17AQ9UEE5 414 aa7.42□□□□□ -1.22
PDLIM1P4-201ENST00000504327 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.41□□□□□ -1.22
PDLIM1P4-201ENST00000504327 SERTM1A2A2V5 107 aa7.41□□□□□ -1.22
PDLIM1P4-201ENST00000504327 ADAMTS2O95450 1211 aa7.41□□□□□ -1.22
PDLIM1P4-201ENST00000504327 NOS2P35228 1153 aa7.41□□□□□ -1.22
PDLIM1P4-201ENST00000504327 PSMA6P60900 246 aaKnown RBP7.41□□□□□ -1.22
PDLIM1P4-201ENST00000504327 LBRQ14739 615 aaKnown RBP7.41□□□□□ -1.22
PDLIM1P4-201ENST00000504327 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
PDLIM1P4-201ENST00000504327 MBIPQ9NS73 344 aa7.41□□□□□ -1.22
PDLIM1P4-201ENST00000504327 A0A1W2PNR3 127 aa7.4□□□□□ -1.22
PDLIM1P4-201ENST00000504327 EML1O00423 815 aa7.4□□□□□ -1.22
PDLIM1P4-201ENST00000504327 C21orf2O43822 256 aa7.4□□□□□ -1.22
PDLIM1P4-201ENST00000504327 SLURP2P0DP57 97 aa7.4□□□□□ -1.22
PDLIM1P4-201ENST00000504327 WHAMMQ8TF30 809 aa7.4□□□□□ -1.22
PDLIM1P4-201ENST00000504327 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
PDLIM1P4-201ENST00000504327 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.22
PDLIM1P4-201ENST00000504327 PODXL2Q9NZ53 605 aa7.4□□□□□ -1.22
PDLIM1P4-201ENST00000504327 IGF1RP08069 1367 aa7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 MX2P20592 715 aa7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 SRSF11Q05519 484 aaKnown RBP7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 ZNF385CQ66K41 422 aaPredicted RBP7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 BICDL1Q6ZP65 573 aa7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 GAS2L2Q8NHY3 880 aa7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 SCG3Q8WXD2 468 aaKnown RBP7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 KLRG1Q96E93 195 aa7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 ZIC5Q96T25 663 aa7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 HINFPQ9BQA5 517 aa7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 NDFIP2Q9NV92 336 aa7.39□□□□□ -1.23
PDLIM1P4-201ENST00000504327 BNIP3LO60238 219 aa7.38□□□□□ -1.23
PDLIM1P4-201ENST00000504327 NLRP8Q86W28 1048 aa7.38□□□□□ -1.23
PDLIM1P4-201ENST00000504327 SVOPQ8N4V2 548 aa7.38□□□□□ -1.23
PDLIM1P4-201ENST00000504327 CHMP7Q8WUX9 453 aaPredicted RBP7.38□□□□□ -1.23
PDLIM1P4-201ENST00000504327 ZCCHC2Q9C0B9 1178 aaKnown RBP7.38□□□□□ -1.23
PDLIM1P4-201ENST00000504327 NOVA2Q9UNW9 492 aaKnown RBP7.38□□□□□ -1.23
PDLIM1P4-201ENST00000504327 CHMP3Q9Y3E7 222 aa7.38□□□□□ -1.23
PDLIM1P4-201ENST00000504327 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
PDLIM1P4-201ENST00000504327 ATAD2Q6PL18 1390 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 DCDC2BA2VCK2 349 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 POTEAQ6S8J7 498 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 CCDC82Q8N4S0 544 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 CFHR5Q9BXR6 569 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 PHACTR1Q9C0D0 580 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 C1orf115Q9H7X2 142 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 ZMIZ1Q9ULJ6 1067 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 ATXN7L1Q9ULK2 861 aaPredicted RBP7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 PHF24Q9UPV7 400 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 GJA3Q9Y6H8 435 aa7.37□□□□□ -1.23
PDLIM1P4-201ENST00000504327 FAM181BA6NEQ2 426 aa7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 ATXN7O15265 892 aaPredicted RBP7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 FGFR3P22607 806 aa7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 HIRAP54198 1017 aaPredicted RBP7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 SRPK2P78362 688 aaKnown RBP7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 FIGNL1Q6PIW4 674 aa7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 LYPD4Q6UWN0 246 aa7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 FAM200AQ8TCP9 573 aa7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 RHPN1Q8TCX5 695 aa7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 STK32AQ8WU08 396 aa7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 C2orf49Q9BVC5 232 aaPredicted RBP7.36□□□□□ -1.23
PDLIM1P4-201ENST00000504327 SERPINA10Q9UK55 444 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms