RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 PRKCSHP14314 528 aaPredicted RBP15.73■□□□□ 0.11
SPCS3-201ENST00000503362 MAP3K11Q16584 847 aa15.73■□□□□ 0.11
SPCS3-201ENST00000503362 SYTL4Q96C24 671 aaPredicted RBP15.73■□□□□ 0.11
SPCS3-201ENST00000503362 CABP4P57796 275 aa15.73■□□□□ 0.11
SPCS3-201ENST00000503362 MADDQ8WXG6 1647 aa15.73■□□□□ 0.11
SPCS3-201ENST00000503362 ME1P48163 572 aa15.73■□□□□ 0.11
SPCS3-201ENST00000503362 TET3O43151 1660 aa15.73■□□□□ 0.11
SPCS3-201ENST00000503362 CHD1O14646 1710 aa15.73■□□□□ 0.11
SPCS3-201ENST00000503362 HCLS1P14317 486 aaPredicted RBP15.72■□□□□ 0.11
SPCS3-201ENST00000503362 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
SPCS3-201ENST00000503362 LARP1Q6PKG0 1096 aaKnown RBP15.72■□□□□ 0.11
SPCS3-201ENST00000503362 PHAXQ9H814 394 aaKnown RBP15.72■□□□□ 0.11
SPCS3-201ENST00000503362 AMOTQ4VCS5 1084 aa15.72■□□□□ 0.11
SPCS3-201ENST00000503362 USP48Q86UV5 1035 aa15.72■□□□□ 0.11
SPCS3-201ENST00000503362 MYD88Q99836 296 aa15.72■□□□□ 0.11
SPCS3-201ENST00000503362 CD2BP2O95400 341 aaKnown RBP15.72■□□□□ 0.11
SPCS3-201ENST00000503362 KRT32Q14532 448 aa15.72■□□□□ 0.11
SPCS3-201ENST00000503362 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
SPCS3-201ENST00000503362 CNPY2Q9Y2B0 182 aa15.72■□□□□ 0.11
SPCS3-201ENST00000503362 MAP3K4Q9Y6R4 1608 aa15.71■□□□□ 0.11
SPCS3-201ENST00000503362 EVI5LQ96CN4 794 aa15.71■□□□□ 0.11
SPCS3-201ENST00000503362 TCEANC2Q96MN5 208 aa15.71■□□□□ 0.11
SPCS3-201ENST00000503362 NAT10Q9H0A0 1025 aaKnown RBP15.71■□□□□ 0.11
SPCS3-201ENST00000503362 STK38Q15208 465 aa15.71■□□□□ 0.11
SPCS3-201ENST00000503362 NECAB1Q8N987 351 aa15.71■□□□□ 0.11
SPCS3-201ENST00000503362 RASSF8Q8NHQ8 419 aa15.71■□□□□ 0.11
SPCS3-201ENST00000503362 AKAP17AQ02040 695 aaKnown RBP15.71■□□□□ 0.1
SPCS3-201ENST00000503362 ZSCAN22P10073 491 aaPredicted RBP15.7■□□□□ 0.1
SPCS3-201ENST00000503362 FKBP4Q02790 459 aaKnown RBP eCLIP15.7■□□□□ 0.1
SPCS3-201ENST00000503362 CKAP2LQ8IYA6 745 aa15.7■□□□□ 0.1
SPCS3-201ENST00000503362 ZNF396Q96N95 335 aaPredicted RBP15.7■□□□□ 0.1
SPCS3-201ENST00000503362 SHROOM2Q13796 1616 aa15.7■□□□□ 0.1
SPCS3-201ENST00000503362 PNMA6EA0A0J9YXQ4 647 aa15.7■□□□□ 0.1
SPCS3-201ENST00000503362 GTF2E1P29083 439 aaPredicted RBP15.7■□□□□ 0.1
SPCS3-201ENST00000503362 ADCY5O95622 1261 aa15.7■□□□□ 0.1
SPCS3-201ENST00000503362 CCAR2Q8N163 923 aaKnown RBP15.7■□□□□ 0.1
SPCS3-201ENST00000503362 HYPKQ9NX55 129 aa15.7■□□□□ 0.1
SPCS3-201ENST00000503362 UBE2HP62256 183 aa15.69■□□□□ 0.1
SPCS3-201ENST00000503362 GIMAP6Q6P9H5 292 aa15.69■□□□□ 0.1
SPCS3-201ENST00000503362 PA2G4Q9UQ80 394 aaKnown RBP15.69■□□□□ 0.1
SPCS3-201ENST00000503362 SOS1Q07889 1333 aaPredicted RBP15.69■□□□□ 0.1
SPCS3-201ENST00000503362 JARID2Q92833 1246 aaPredicted RBP15.69■□□□□ 0.1
SPCS3-201ENST00000503362 RBSNQ9H1K0 784 aa15.69■□□□□ 0.1
SPCS3-201ENST00000503362 CFAP45Q9UL16 551 aa15.69■□□□□ 0.1
SPCS3-201ENST00000503362 YEATS2Q9ULM3 1422 aa15.69■□□□□ 0.1
SPCS3-201ENST00000503362 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
SPCS3-201ENST00000503362 SCAND2PQ9GZW5 306 aaPredicted RBP15.69■□□□□ 0.1
SPCS3-201ENST00000503362 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
SPCS3-201ENST00000503362 TULP1O00294 542 aaPredicted RBP15.68■□□□□ 0.1
SPCS3-201ENST00000503362 GAS2L3Q86XJ1 694 aa15.68■□□□□ 0.1
SPCS3-201ENST00000503362 SMC2O95347 1197 aa15.68■□□□□ 0.1
SPCS3-201ENST00000503362 PKP1Q13835 747 aa15.68■□□□□ 0.1
SPCS3-201ENST00000503362 CCDC158Q5M9N0 1113 aa15.68■□□□□ 0.1
SPCS3-201ENST00000503362 ZNF830Q96NB3 372 aaPredicted RBP15.68■□□□□ 0.1
SPCS3-201ENST00000503362 PDIA4P13667 645 aaKnown RBP15.67■□□□□ 0.1
SPCS3-201ENST00000503362 FILIP1Q7Z7B0 1213 aa15.67■□□□□ 0.1
SPCS3-201ENST00000503362 SPHKAPQ2M3C7 1700 aa15.67■□□□□ 0.1
SPCS3-201ENST00000503362 AK2P54819 239 aa15.67■□□□□ 0.1
SPCS3-201ENST00000503362 TTC39AQ5SRH9 613 aa15.67■□□□□ 0.1
SPCS3-201ENST00000503362 E9PCH4 1651 aa15.67■□□□□ 0.1
SPCS3-201ENST00000503362 RTL1A6NKG5 1358 aa15.67■□□□□ 0.1
SPCS3-201ENST00000503362 CPA1P15085 419 aa15.67■□□□□ 0.1
SPCS3-201ENST00000503362 EFCAB6Q5THR3 1501 aa15.67■□□□□ 0.1
SPCS3-201ENST00000503362 DHX16O60231 1041 aaKnown RBP15.67■□□□□ 0.1
SPCS3-201ENST00000503362 INTS4Q96HW7 963 aaKnown RBP15.67■□□□□ 0.1
SPCS3-201ENST00000503362 LMBRD1Q9NUN5 540 aa15.67■□□□□ 0.1
SPCS3-201ENST00000503362 LRRC59Q96AG4 307 aaKnown RBP15.66■□□□□ 0.1
SPCS3-201ENST00000503362 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
SPCS3-201ENST00000503362 ATP2B1P20020 1258 aa15.66■□□□□ 0.1
SPCS3-201ENST00000503362 MCM5P33992 734 aa15.66■□□□□ 0.1
SPCS3-201ENST00000503362 BRPF1P55201 1214 aaPredicted RBP15.66■□□□□ 0.1
SPCS3-201ENST00000503362 ZKSCAN5Q9Y2L8 839 aa15.66■□□□□ 0.1
SPCS3-201ENST00000503362 PES1O00541 588 aaKnown RBP15.66■□□□□ 0.1
SPCS3-201ENST00000503362 SAFBQ15424 915 aaKnown RBP eCLIP15.66■□□□□ 0.1
SPCS3-201ENST00000503362 ZNF771Q7L3S4 317 aaPredicted RBP15.66■□□□□ 0.1
SPCS3-201ENST00000503362 RBM8AQ9Y5S9 174 aaKnown RBP15.66■□□□□ 0.1
SPCS3-201ENST00000503362 DNM1Q05193 864 aaKnown RBP15.65■□□□□ 0.1
SPCS3-201ENST00000503362 HOXC9P31274 260 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 A0A087WZG4 1122 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 FSD2A1L4K1 749 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 PPFIA3O75145 1194 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 CCDC57Q2TAC2 916 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 CWF19L2Q2TBE0 894 aaKnown RBP15.65■□□□□ 0.1
SPCS3-201ENST00000503362 LAMC1P11047 1609 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 MAP3K5Q99683 1374 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 ATP5J2-PTCD1G3V325 749 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 DTNBO60941 627 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 PTCD1O75127 700 aaKnown RBP15.65■□□□□ 0.1
SPCS3-201ENST00000503362 UBE3BQ7Z3V4 1068 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 CHAMP1Q96JM3 812 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 STRN4Q9NRL3 753 aa15.65■□□□□ 0.1
SPCS3-201ENST00000503362 FAM177BA6PVY3 158 aa15.64■□□□□ 0.09
SPCS3-201ENST00000503362 GUCY1B3Q02153 619 aa15.64■□□□□ 0.09
SPCS3-201ENST00000503362 TOM1L2Q6ZVM7 507 aa15.64■□□□□ 0.09
SPCS3-201ENST00000503362 F13A1P00488 732 aa15.64■□□□□ 0.09
SPCS3-201ENST00000503362 MLH3Q9UHC1 1453 aa15.64■□□□□ 0.09
SPCS3-201ENST00000503362 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
SPCS3-201ENST00000503362 ZNF853P0CG23 659 aa15.63■□□□□ 0.09
SPCS3-201ENST00000503362 KIAA0232Q92628 1395 aa15.63■□□□□ 0.09
SPCS3-201ENST00000503362 ERICH2A1L162 156 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms