RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 KCNQ3O43525 872 aa23.29■■□□□ 1.32
TRIM41-203ENST00000503114 ADCY9O60503 1353 aa23.28■■□□□ 1.32
TRIM41-203ENST00000503114 BTBD11A6QL63 1104 aa23.28■■□□□ 1.32
TRIM41-203ENST00000503114 TRIM6-TRIM34B2RNG4 842 aa23.28■■□□□ 1.32
TRIM41-203ENST00000503114 MCCP23508 829 aa23.28■■□□□ 1.32
TRIM41-203ENST00000503114 TEFQ10587 303 aa23.28■■□□□ 1.32
TRIM41-203ENST00000503114 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
TRIM41-203ENST00000503114 GCP02774 474 aa23.27■■□□□ 1.32
TRIM41-203ENST00000503114 MCM2P49736 904 aa23.27■■□□□ 1.32
TRIM41-203ENST00000503114 ZGPATQ8N5A5 531 aaKnown RBP23.27■■□□□ 1.32
TRIM41-203ENST00000503114 RILPL2Q969X0 211 aa23.27■■□□□ 1.32
TRIM41-203ENST00000503114 HEG1Q9ULI3 1381 aa23.27■■□□□ 1.32
TRIM41-203ENST00000503114 RNMTO43148 476 aaKnown RBP23.27■■□□□ 1.32
TRIM41-203ENST00000503114 GAS2L3Q86XJ1 694 aa23.27■■□□□ 1.32
TRIM41-203ENST00000503114 UNC5CLQ8IV45 518 aa23.27■■□□□ 1.32
TRIM41-203ENST00000503114 RGPD5Q99666 1765 aa23.26■■□□□ 1.31
TRIM41-203ENST00000503114 PI4KAP2A4QPH2 592 aa23.25■■□□□ 1.31
TRIM41-203ENST00000503114 NBPF7P0C2Y1 421 aaPredicted RBP23.25■■□□□ 1.31
TRIM41-203ENST00000503114 PKP1Q13835 747 aa23.25■■□□□ 1.31
TRIM41-203ENST00000503114 PI4KAP1Q8N8J0 262 aa23.25■■□□□ 1.31
TRIM41-203ENST00000503114 RHPN1Q8TCX5 695 aa23.25■■□□□ 1.31
TRIM41-203ENST00000503114 IL1RAPL2Q9NP60 686 aa23.25■■□□□ 1.31
TRIM41-203ENST00000503114 ZBTB7CA1YPR0 619 aa23.25■■□□□ 1.31
TRIM41-203ENST00000503114 SURF6O75683 361 aaKnown RBP23.25■■□□□ 1.31
TRIM41-203ENST00000503114 NEK4P51957 841 aa23.25■■□□□ 1.31
TRIM41-203ENST00000503114 MPRIPQ6WCQ1 1025 aa23.25■■□□□ 1.31
TRIM41-203ENST00000503114 KIF1BPQ96EK5 621 aa23.25■■□□□ 1.31
TRIM41-203ENST00000503114 MST1RQ04912 1400 aa23.24■■□□□ 1.31
TRIM41-203ENST00000503114 SRGAP3O43295 1099 aa23.24■■□□□ 1.31
TRIM41-203ENST00000503114 PI4K2BQ8TCG2 481 aa23.24■■□□□ 1.31
TRIM41-203ENST00000503114 ORAI2Q96SN7 254 aa23.24■■□□□ 1.31
TRIM41-203ENST00000503114 PALD1Q9ULE6 856 aa23.24■■□□□ 1.31
TRIM41-203ENST00000503114 ANO2Q9NQ90 1003 aa23.23■■□□□ 1.31
TRIM41-203ENST00000503114 ZDHHC9Q9Y397 364 aa23.23■■□□□ 1.31
TRIM41-203ENST00000503114 CUL4AQ13619 759 aa23.23■■□□□ 1.31
TRIM41-203ENST00000503114 C1orf141Q5JVX7 400 aa23.23■■□□□ 1.31
TRIM41-203ENST00000503114 TMX3Q96JJ7 454 aa23.23■■□□□ 1.31
TRIM41-203ENST00000503114 RRAGDQ9NQL2 400 aaPredicted RBP23.23■■□□□ 1.31
TRIM41-203ENST00000503114 DBF4Q9UBU7 674 aaPredicted RBP23.23■■□□□ 1.31
TRIM41-203ENST00000503114 DDX49Q9Y6V7 483 aaKnown RBP23.23■■□□□ 1.31
TRIM41-203ENST00000503114 ALS2Q96Q42 1657 aa23.22■■□□□ 1.31
TRIM41-203ENST00000503114 MTX1Q13505 466 aa23.22■■□□□ 1.31
TRIM41-203ENST00000503114 MCTP1Q6DN14 999 aa23.22■■□□□ 1.31
TRIM41-203ENST00000503114 NUTM1Q86Y26 1132 aa23.22■■□□□ 1.31
TRIM41-203ENST00000503114 ANKRD24Q8TF21 1146 aa23.22■■□□□ 1.31
TRIM41-203ENST00000503114 LMBRD1Q9NUN5 540 aa23.22■■□□□ 1.31
TRIM41-203ENST00000503114 USP42Q9H9J4 1324 aaKnown RBP23.22■■□□□ 1.31
TRIM41-203ENST00000503114 HSP90AB4PQ58FF6 505 aa23.21■■□□□ 1.31
TRIM41-203ENST00000503114 GIGYF1O75420 1035 aaPredicted RBP23.2■■□□□ 1.3
TRIM41-203ENST00000503114 ALDH1L1O75891 902 aa23.2■■□□□ 1.3
TRIM41-203ENST00000503114 ANXA1P04083 346 aa23.2■■□□□ 1.3
TRIM41-203ENST00000503114 IL25Q9H293 177 aa23.2■■□□□ 1.3
TRIM41-203ENST00000503114 SCN11AQ9UI33 1791 aa23.19■■□□□ 1.3
TRIM41-203ENST00000503114 INTS4Q96HW7 963 aaKnown RBP23.19■■□□□ 1.3
TRIM41-203ENST00000503114 HSPA4P34932 840 aa23.18■■□□□ 1.3
TRIM41-203ENST00000503114 XPCQ01831 940 aaPredicted RBP23.18■■□□□ 1.3
TRIM41-203ENST00000503114 TTC41PQ6P2S7 1318 aa23.17■■□□□ 1.3
TRIM41-203ENST00000503114 C1orf167Q5SNV9 1468 aa23.16■■□□□ 1.3
TRIM41-203ENST00000503114 SGSM2O43147 1006 aa23.16■■□□□ 1.3
TRIM41-203ENST00000503114 ZNF445P59923 1031 aa23.16■■□□□ 1.3
TRIM41-203ENST00000503114 KSR2Q6VAB6 950 aa23.16■■□□□ 1.3
TRIM41-203ENST00000503114 AXIN2Q9Y2T1 843 aa23.16■■□□□ 1.3
TRIM41-203ENST00000503114 CNTROBQ8N137 903 aa23.16■■□□□ 1.3
TRIM41-203ENST00000503114 MAP3K2Q9Y2U5 619 aa23.16■■□□□ 1.3
TRIM41-203ENST00000503114 RAD50Q92878 1312 aa23.15■■□□□ 1.3
TRIM41-203ENST00000503114 C5P01031 1676 aa23.15■■□□□ 1.3
TRIM41-203ENST00000503114 PROSER3Q2NL68 480 aa23.15■■□□□ 1.3
TRIM41-203ENST00000503114 KRT28Q7Z3Y7 464 aa23.14■■□□□ 1.3
TRIM41-203ENST00000503114 ABCC6O95255 1503 aa23.14■■□□□ 1.29
TRIM41-203ENST00000503114 BRD1O95696 1058 aa23.14■■□□□ 1.29
TRIM41-203ENST00000503114 HYPKQ9NX55 129 aa23.14■■□□□ 1.29
TRIM41-203ENST00000503114 HDAC5Q9UQL6 1122 aa23.14■■□□□ 1.29
TRIM41-203ENST00000503114 ERBB3P21860 1342 aa23.13■■□□□ 1.29
TRIM41-203ENST00000503114 UTYO14607 1347 aa23.12■■□□□ 1.29
TRIM41-203ENST00000503114 MAP4K4O95819 1239 aaPredicted RBP23.12■■□□□ 1.29
TRIM41-203ENST00000503114 LSG1Q9H089 658 aaKnown RBP23.12■■□□□ 1.29
TRIM41-203ENST00000503114 GLRX3O76003 335 aaKnown RBP23.12■■□□□ 1.29
TRIM41-203ENST00000503114 COL18A1P39060 1754 aa23.11■■□□□ 1.29
TRIM41-203ENST00000503114 LMOD2Q6P5Q4 547 aa23.11■■□□□ 1.29
TRIM41-203ENST00000503114 C9orf78Q9NZ63 289 aaPredicted RBP23.11■■□□□ 1.29
TRIM41-203ENST00000503114 PRAMEF22A3QJZ6 481 aa23.1■■□□□ 1.29
TRIM41-203ENST00000503114 PLEKHG5O94827 1062 aa23.1■■□□□ 1.29
TRIM41-203ENST00000503114 ZSCAN23Q3MJ62 389 aa23.1■■□□□ 1.29
TRIM41-203ENST00000503114 UPF3BQ9BZI7 483 aaKnown RBP23.1■■□□□ 1.29
TRIM41-203ENST00000503114 DDX21Q9NR30 783 aaKnown RBP eCLIP23.1■■□□□ 1.29
TRIM41-203ENST00000503114 PRPF40AO75400 957 aaKnown RBP23.1■■□□□ 1.29
TRIM41-203ENST00000503114 CAVIN1Q6NZI2 390 aaKnown RBP23.1■■□□□ 1.29
TRIM41-203ENST00000503114 ERC1Q8IUD2 1116 aa23.1■■□□□ 1.29
TRIM41-203ENST00000503114 LINS1Q8NG48 757 aa23.1■■□□□ 1.29
TRIM41-203ENST00000503114 GPT2Q8TD30 523 aa23.1■■□□□ 1.29
TRIM41-203ENST00000503114 CLCN1P35523 988 aa23.09■■□□□ 1.29
TRIM41-203ENST00000503114 OS9Q13438 667 aaPredicted RBP23.09■■□□□ 1.29
TRIM41-203ENST00000503114 CLASRPQ8N2M8 674 aaKnown RBP23.09■■□□□ 1.29
TRIM41-203ENST00000503114 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.29
TRIM41-203ENST00000503114 SNX14Q9Y5W7 946 aa23.08■■□□□ 1.29
TRIM41-203ENST00000503114 PDIA6Q15084 440 aa23.08■■□□□ 1.28
TRIM41-203ENST00000503114 CWF19L2Q2TBE0 894 aaKnown RBP23.08■■□□□ 1.28
TRIM41-203ENST00000503114 PROSER2Q86WR7 435 aaPredicted RBP23.08■■□□□ 1.28
TRIM41-203ENST00000503114 DDX58O95786 925 aaKnown RBP23.07■■□□□ 1.28
TRIM41-203ENST00000503114 NASPP49321 788 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms