RNA–Protein interactions for RNA: ENST00000502714.1

YIPF3-210, Transcript of Yip1 domain family member 3, humanhuman

TSL 4

Gene YIPF3, Length 795 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-210ENST00000502714 CCDC87Q9NVE4 849 aa15.49■□□□□ 0.07
YIPF3-210ENST00000502714 TAF1LQ8IZX4 1826 aa15.48■□□□□ 0.07
YIPF3-210ENST00000502714 ZNF827Q17R98 1081 aa15.48■□□□□ 0.07
YIPF3-210ENST00000502714 FLAD1Q8NFF5 587 aa15.48■□□□□ 0.07
YIPF3-210ENST00000502714 RTCBQ9Y3I0 505 aaKnown RBP15.48■□□□□ 0.07
YIPF3-210ENST00000502714 COL5A3P25940 1745 aaPredicted RBP15.48■□□□□ 0.07
YIPF3-210ENST00000502714 SLFN5Q08AF3 891 aa15.47■□□□□ 0.07
YIPF3-210ENST00000502714 DUSP27Q5VZP5 1158 aa15.47■□□□□ 0.07
YIPF3-210ENST00000502714 NPM2Q86SE8 214 aaKnown RBP15.47■□□□□ 0.07
YIPF3-210ENST00000502714 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
YIPF3-210ENST00000502714 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
YIPF3-210ENST00000502714 ERBB4Q15303 1308 aa15.46■□□□□ 0.07
YIPF3-210ENST00000502714 PRAMEF22A3QJZ6 481 aa15.46■□□□□ 0.07
YIPF3-210ENST00000502714 ADRA2BP18089 450 aa15.46■□□□□ 0.07
YIPF3-210ENST00000502714 SSFA2P28290 1259 aa15.46■□□□□ 0.07
YIPF3-210ENST00000502714 KRT24Q2M2I5 525 aa15.46■□□□□ 0.07
YIPF3-210ENST00000502714 INTS5Q6P9B9 1019 aaKnown RBP15.46■□□□□ 0.07
YIPF3-210ENST00000502714 LAMB4A4D0S4 1761 aa15.46■□□□□ 0.07
YIPF3-210ENST00000502714 RPS6KA4O75676 772 aa15.45■□□□□ 0.06
YIPF3-210ENST00000502714 CANXP27824 592 aaKnown RBP15.45■□□□□ 0.06
YIPF3-210ENST00000502714 R3HDM1Q15032 1099 aaKnown RBP15.45■□□□□ 0.06
YIPF3-210ENST00000502714 HDGFL1Q5TGJ6 251 aa15.45■□□□□ 0.06
YIPF3-210ENST00000502714 ZBTB1Q9Y2K1 713 aa15.45■□□□□ 0.06
YIPF3-210ENST00000502714 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.44■□□□□ 0.06
YIPF3-210ENST00000502714 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
YIPF3-210ENST00000502714 IL6STP40189 918 aaPredicted RBP15.44■□□□□ 0.06
YIPF3-210ENST00000502714 TWISTNBQ3B726 338 aaPredicted RBP15.44■□□□□ 0.06
YIPF3-210ENST00000502714 C8orf58Q8NAV2 365 aa15.44■□□□□ 0.06
YIPF3-210ENST00000502714 ELL2O00472 640 aaPredicted RBP15.43■□□□□ 0.06
YIPF3-210ENST00000502714 PHF14O94880 888 aa15.43■□□□□ 0.06
YIPF3-210ENST00000502714 A1BGP04217 495 aa15.43■□□□□ 0.06
YIPF3-210ENST00000502714 EXOSC9Q06265 439 aaKnown RBP15.43■□□□□ 0.06
YIPF3-210ENST00000502714 TRAPPC3LQ5T215 181 aa15.43■□□□□ 0.06
YIPF3-210ENST00000502714 CDCA7LQ96GN5 454 aa15.43■□□□□ 0.06
YIPF3-210ENST00000502714 PNPLA7Q6ZV29 1317 aa15.43■□□□□ 0.06
YIPF3-210ENST00000502714 A0A087WZG4 1122 aa15.42■□□□□ 0.06
YIPF3-210ENST00000502714 PSDA5PKW4 1024 aaPredicted RBP15.42■□□□□ 0.06
YIPF3-210ENST00000502714 MSH5O43196 834 aa15.42■□□□□ 0.06
YIPF3-210ENST00000502714 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
YIPF3-210ENST00000502714 TRMT2AQ8IZ69 625 aaKnown RBP15.42■□□□□ 0.06
YIPF3-210ENST00000502714 ZNF330Q9Y3S2 320 aaPredicted RBP15.42■□□□□ 0.06
YIPF3-210ENST00000502714 COL15A1P39059 1388 aa15.41■□□□□ 0.06
YIPF3-210ENST00000502714 QSER1Q2KHR3 1735 aa15.41■□□□□ 0.06
YIPF3-210ENST00000502714 RFC4P35249 363 aa15.41■□□□□ 0.06
YIPF3-210ENST00000502714 EIF5P55010 431 aaKnown RBP15.41■□□□□ 0.06
YIPF3-210ENST00000502714 TSPYL6Q8N831 410 aa15.41■□□□□ 0.06
YIPF3-210ENST00000502714 YTHDC1Q96MU7 727 aaKnown RBP15.41■□□□□ 0.06
YIPF3-210ENST00000502714 STK31Q9BXU1 1019 aa15.41■□□□□ 0.06
YIPF3-210ENST00000502714 DBF4Q9UBU7 674 aaPredicted RBP15.41■□□□□ 0.06
YIPF3-210ENST00000502714 UBR3Q6ZT12 1888 aa15.4■□□□□ 0.06
YIPF3-210ENST00000502714 CT47B1P0C2W7 299 aaPredicted RBP15.4■□□□□ 0.06
YIPF3-210ENST00000502714 SLC16A10Q8TF71 515 aa15.4■□□□□ 0.06
YIPF3-210ENST00000502714 NECTIN2Q92692 538 aa15.4■□□□□ 0.06
YIPF3-210ENST00000502714 DDX21Q9NR30 783 aaKnown RBP eCLIP15.4■□□□□ 0.06
YIPF3-210ENST00000502714 NBPF26B4DH59 902 aa15.39■□□□□ 0.05
YIPF3-210ENST00000502714 ZPR1O75312 459 aa15.39■□□□□ 0.05
YIPF3-210ENST00000502714 MYL6BP14649 208 aa15.39■□□□□ 0.05
YIPF3-210ENST00000502714 NBPF10Q6P3W6 841 aaKnown RBP15.39■□□□□ 0.05
YIPF3-210ENST00000502714 COL23A1Q86Y22 540 aaPredicted RBP15.39■□□□□ 0.05
YIPF3-210ENST00000502714 NBPF15Q8N660 670 aa15.39■□□□□ 0.05
YIPF3-210ENST00000502714 ARHGEF1Q92888 912 aaKnown RBP15.39■□□□□ 0.05
YIPF3-210ENST00000502714 ZNF428Q96B54 188 aa15.39■□□□□ 0.05
YIPF3-210ENST00000502714 HYPKQ9NX55 129 aa15.39■□□□□ 0.05
YIPF3-210ENST00000502714 CHPF2Q9P2E5 772 aa15.39■□□□□ 0.05
YIPF3-210ENST00000502714 MYH14Q7Z406 1995 aaKnown RBP15.38■□□□□ 0.05
YIPF3-210ENST00000502714 VAMP4O75379 141 aa15.38■□□□□ 0.05
YIPF3-210ENST00000502714 PIP4K2AP48426 406 aaPredicted RBP15.38■□□□□ 0.05
YIPF3-210ENST00000502714 AMIGO3Q86WK7 504 aa15.38■□□□□ 0.05
YIPF3-210ENST00000502714 ARXQ96QS3 562 aa15.38■□□□□ 0.05
YIPF3-210ENST00000502714 PDIA6Q15084 440 aa15.37■□□□□ 0.05
YIPF3-210ENST00000502714 KIF6Q6ZMV9 814 aa15.37■□□□□ 0.05
YIPF3-210ENST00000502714 NARFQ9UHQ1 456 aa15.37■□□□□ 0.05
YIPF3-210ENST00000502714 TUBGCP6Q96RT7 1819 aa15.37■□□□□ 0.05
YIPF3-210ENST00000502714 SMIM5Q71RC9 77 aa15.36■□□□□ 0.05
YIPF3-210ENST00000502714 DZIP3Q86Y13 1208 aaKnown RBP15.36■□□□□ 0.05
YIPF3-210ENST00000502714 USP42Q9H9J4 1324 aaKnown RBP15.36■□□□□ 0.05
YIPF3-210ENST00000502714 PROSER3Q2NL68 480 aa15.35■□□□□ 0.05
YIPF3-210ENST00000502714 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
YIPF3-210ENST00000502714 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
YIPF3-210ENST00000502714 CASZ1Q86V15 1759 aa15.34■□□□□ 0.05
YIPF3-210ENST00000502714 RGL2O15211 777 aa15.34■□□□□ 0.05
YIPF3-210ENST00000502714 ANXA1P04083 346 aa15.34■□□□□ 0.05
YIPF3-210ENST00000502714 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
YIPF3-210ENST00000502714 PDGFDQ9GZP0 370 aaPredicted RBP15.34■□□□□ 0.05
YIPF3-210ENST00000502714 TBC1D2BQ9UPU7 963 aa15.34■□□□□ 0.05
YIPF3-210ENST00000502714 ERVV-1B6SEH8 477 aa15.33■□□□□ 0.04
YIPF3-210ENST00000502714 ZBTB7AO95365 584 aa15.33■□□□□ 0.04
YIPF3-210ENST00000502714 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
YIPF3-210ENST00000502714 USPL1Q5W0Q7 1092 aa15.33■□□□□ 0.04
YIPF3-210ENST00000502714 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
YIPF3-210ENST00000502714 LRP10Q7Z4F1 713 aa15.33■□□□□ 0.04
YIPF3-210ENST00000502714 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
YIPF3-210ENST00000502714 SRP68Q9UHB9 627 aaKnown RBP15.33■□□□□ 0.04
YIPF3-210ENST00000502714 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
YIPF3-210ENST00000502714 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
YIPF3-210ENST00000502714 DDX58O95786 925 aaKnown RBP15.32■□□□□ 0.04
YIPF3-210ENST00000502714 GYS1P13807 737 aa15.32■□□□□ 0.04
YIPF3-210ENST00000502714 AIMP1Q12904 312 aaKnown RBP15.32■□□□□ 0.04
YIPF3-210ENST00000502714 ALDH1L2Q3SY69 923 aa15.32■□□□□ 0.04
YIPF3-210ENST00000502714 CLEC4GQ6UXB4 293 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms