RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 NFIXQ14938 502 aa17.43■□□□□ 0.38
LMNA-218ENST00000502357 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
LMNA-218ENST00000502357 POTECB2RU33 542 aa17.42■□□□□ 0.38
LMNA-218ENST00000502357 SLC52A2Q9HAB3 445 aa17.42■□□□□ 0.38
LMNA-218ENST00000502357 CCDC88AQ3V6T2 1871 aa17.41■□□□□ 0.38
LMNA-218ENST00000502357 C1orf141Q5JVX7 400 aa17.41■□□□□ 0.38
LMNA-218ENST00000502357 NARFQ9UHQ1 456 aa17.41■□□□□ 0.38
LMNA-218ENST00000502357 ZC3H4Q9UPT8 1303 aaKnown RBP17.41■□□□□ 0.38
LMNA-218ENST00000502357 AKAP4Q5JQC9 854 aa17.4■□□□□ 0.38
LMNA-218ENST00000502357 C16orf71Q8IYS4 520 aaPredicted RBP17.4■□□□□ 0.38
LMNA-218ENST00000502357 UBR2Q8IWV8 1755 aa17.4■□□□□ 0.38
LMNA-218ENST00000502357 CARMIL3Q8ND23 1372 aa17.4■□□□□ 0.38
LMNA-218ENST00000502357 GLTPD2A6NH11 291 aa17.39■□□□□ 0.37
LMNA-218ENST00000502357 NFKBIEO00221 500 aa17.39■□□□□ 0.37
LMNA-218ENST00000502357 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
LMNA-218ENST00000502357 SMC1BQ8NDV3 1235 aa17.39■□□□□ 0.37
LMNA-218ENST00000502357 ZBTB1Q9Y2K1 713 aa17.39■□□□□ 0.37
LMNA-218ENST00000502357 ANKRD31Q8N7Z5 1873 aa17.39■□□□□ 0.37
LMNA-218ENST00000502357 RNMTO43148 476 aaKnown RBP17.38■□□□□ 0.37
LMNA-218ENST00000502357 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
LMNA-218ENST00000502357 COL15A1P39059 1388 aa17.38■□□□□ 0.37
LMNA-218ENST00000502357 TIAM2Q8IVF5 1701 aa17.38■□□□□ 0.37
LMNA-218ENST00000502357 ZPR1O75312 459 aa17.37■□□□□ 0.37
LMNA-218ENST00000502357 SERPINB2P05120 415 aa17.37■□□□□ 0.37
LMNA-218ENST00000502357 LMNB1P20700 586 aa17.37■□□□□ 0.37
LMNA-218ENST00000502357 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
LMNA-218ENST00000502357 MORC1Q86VD1 984 aa17.36■□□□□ 0.37
LMNA-218ENST00000502357 POLR3GLQ9BT43 218 aa17.36■□□□□ 0.37
LMNA-218ENST00000502357 VSIG10Q8N0Z9 540 aa17.35■□□□□ 0.37
LMNA-218ENST00000502357 FER1L6Q2WGJ9 1857 aa17.35■□□□□ 0.37
LMNA-218ENST00000502357 DICER1Q9UPY3 1922 aaKnown RBP17.35■□□□□ 0.37
LMNA-218ENST00000502357 VEGFAP15692 232 aaPredicted RBP17.34■□□□□ 0.37
LMNA-218ENST00000502357 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
LMNA-218ENST00000502357 TTLL6Q8N841 843 aa17.34■□□□□ 0.37
LMNA-218ENST00000502357 COL11A2P13942 1736 aaPredicted RBP17.33■□□□□ 0.37
LMNA-218ENST00000502357 MTHFSDQ2M296 383 aaKnown RBP17.33■□□□□ 0.36
LMNA-218ENST00000502357 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.36
LMNA-218ENST00000502357 TRIM26Q12899 539 aaPredicted RBP17.32■□□□□ 0.36
LMNA-218ENST00000502357 C2CD5Q86YS7 1000 aa17.32■□□□□ 0.36
LMNA-218ENST00000502357 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
LMNA-218ENST00000502357 SIPA1L3O60292 1781 aaPredicted RBP17.3■□□□□ 0.36
LMNA-218ENST00000502357 SCN7AQ01118 1682 aa17.3■□□□□ 0.36
LMNA-218ENST00000502357 HMOX1P09601 288 aa17.3■□□□□ 0.36
LMNA-218ENST00000502357 HSPA1AP0DMV8 641 aaKnown RBP17.3■□□□□ 0.36
LMNA-218ENST00000502357 HSPA1BP0DMV9 641 aaKnown RBP17.3■□□□□ 0.36
LMNA-218ENST00000502357 TBC1D9BQ66K14 1250 aa17.3■□□□□ 0.36
LMNA-218ENST00000502357 TNS4Q8IZW8 715 aa17.3■□□□□ 0.36
LMNA-218ENST00000502357 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
LMNA-218ENST00000502357 H0YIN7 160 aa17.28■□□□□ 0.36
LMNA-218ENST00000502357 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
LMNA-218ENST00000502357 CANXP27824 592 aaKnown RBP17.28■□□□□ 0.36
LMNA-218ENST00000502357 LTBP3Q9NS15 1303 aa17.27■□□□□ 0.36
LMNA-218ENST00000502357 POTEIP0CG38 1075 aa17.27■□□□□ 0.36
LMNA-218ENST00000502357 POTEJP0CG39 1038 aa17.27■□□□□ 0.36
LMNA-218ENST00000502357 PRR5LQ6MZQ0 368 aa17.27■□□□□ 0.36
LMNA-218ENST00000502357 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
LMNA-218ENST00000502357 ZNF496Q96IT1 587 aaPredicted RBP17.27■□□□□ 0.36
LMNA-218ENST00000502357 BRIP1Q9BX63 1249 aa17.27■□□□□ 0.36
LMNA-218ENST00000502357 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
LMNA-218ENST00000502357 CAPN15O75808 1086 aa17.26■□□□□ 0.35
LMNA-218ENST00000502357 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
LMNA-218ENST00000502357 KNSTRNQ9Y448 316 aa17.26■□□□□ 0.35
LMNA-218ENST00000502357 C21orf2O43822 256 aa17.25■□□□□ 0.35
LMNA-218ENST00000502357 CCDC24Q8N4L8 307 aa17.25■□□□□ 0.35
LMNA-218ENST00000502357 HEG1Q9ULI3 1381 aa17.25■□□□□ 0.35
LMNA-218ENST00000502357 ARFGEF2Q9Y6D5 1785 aa17.25■□□□□ 0.35
LMNA-218ENST00000502357 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
LMNA-218ENST00000502357 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
LMNA-218ENST00000502357 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
LMNA-218ENST00000502357 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
LMNA-218ENST00000502357 BCORQ6W2J9 1755 aa17.23■□□□□ 0.35
LMNA-218ENST00000502357 A0A087WZG4 1122 aa17.22■□□□□ 0.35
LMNA-218ENST00000502357 DDNO94850 711 aaPredicted RBP17.22■□□□□ 0.35
LMNA-218ENST00000502357 IL6STP40189 918 aaPredicted RBP17.22■□□□□ 0.35
LMNA-218ENST00000502357 ERFEQ4G0M1 354 aa17.22■□□□□ 0.35
LMNA-218ENST00000502357 ZNF622Q969S3 477 aaKnown RBP eCLIP17.22■□□□□ 0.35
LMNA-218ENST00000502357 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
LMNA-218ENST00000502357 PDZRN3Q9UPQ7 1066 aa17.22■□□□□ 0.35
LMNA-218ENST00000502357 CEMIPQ8WUJ3 1361 aa17.22■□□□□ 0.35
LMNA-218ENST00000502357 PASKQ96RG2 1323 aa17.21■□□□□ 0.35
LMNA-218ENST00000502357 STARD3NLO95772 234 aa17.21■□□□□ 0.35
LMNA-218ENST00000502357 SRGNP10124 158 aa17.21■□□□□ 0.35
LMNA-218ENST00000502357 PDE6BP35913 854 aa17.21■□□□□ 0.35
LMNA-218ENST00000502357 CHADLQ6NUI6 762 aa17.21■□□□□ 0.35
LMNA-218ENST00000502357 DPY19L2Q6NUT2 758 aa17.21■□□□□ 0.35
LMNA-218ENST00000502357 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
LMNA-218ENST00000502357 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.34
LMNA-218ENST00000502357 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
LMNA-218ENST00000502357 KCNQ3O43525 872 aa17.2■□□□□ 0.34
LMNA-218ENST00000502357 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
LMNA-218ENST00000502357 A1BGP04217 495 aa17.2■□□□□ 0.34
LMNA-218ENST00000502357 ADAMTSL1Q8N6G6 1762 aa17.2■□□□□ 0.34
LMNA-218ENST00000502357 STYK1Q6J9G0 422 aa17.19■□□□□ 0.34
LMNA-218ENST00000502357 L3MBTL3Q96JM7 780 aaPredicted RBP17.19■□□□□ 0.34
LMNA-218ENST00000502357 KLRG2A4D1S0 409 aaPredicted RBP17.18■□□□□ 0.34
LMNA-218ENST00000502357 ITGBL1O95965 494 aaPredicted RBP17.18■□□□□ 0.34
LMNA-218ENST00000502357 PRPF40BQ6NWY9 871 aaKnown RBP17.18■□□□□ 0.34
LMNA-218ENST00000502357 TEX13AQ9BXU3 409 aaPredicted RBP17.18■□□□□ 0.34
LMNA-218ENST00000502357 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
LMNA-218ENST00000502357 MKRN1Q9UHC7 482 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms