RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 NRXN1Q9ULB1 1477 aa5.11□□□□□ -1.59
CLTC-209ENST00000498711 ZBBXA8MT70 800 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 PPM1GO15355 546 aaPredicted RBP5.1□□□□□ -1.59
CLTC-209ENST00000498711 FBXO45P0C2W1 286 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 PLEKHM2Q8IWE5 1019 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 NGEFQ8N5V2 710 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 NOS1P29475 1434 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 TNRQ92752 1358 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 RBM47A0AV96 593 aaKnown RBP5.1□□□□□ -1.59
CLTC-209ENST00000498711 FAM196BA6NMK8 535 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 PIK3CDO00329 1044 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 DUSP27Q5VZP5 1158 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 SEPT9Q9UHD8 586 aaPredicted RBP5.1□□□□□ -1.59
CLTC-209ENST00000498711 ASXL1Q8IXJ9 1541 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 SCAF11Q99590 1463 aaKnown RBP5.1□□□□□ -1.59
CLTC-209ENST00000498711 EIF3AQ14152 1382 aaKnown RBP5.1□□□□□ -1.59
CLTC-209ENST00000498711 ERCC3P19447 782 aa5.1□□□□□ -1.59
CLTC-209ENST00000498711 FAM98CQ17RN3 349 aaKnown RBP5.1□□□□□ -1.59
CLTC-209ENST00000498711 VIRMAQ69YN4 1812 aaKnown RBP5.09□□□□□ -1.59
CLTC-209ENST00000498711 NKTRP30414 1462 aaKnown RBP5.09□□□□□ -1.59
CLTC-209ENST00000498711 MYOM2P54296 1465 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 IFT172Q9UG01 1749 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 PLEKHH1Q9ULM0 1364 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 UNCXA6NJT0 531 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 USP17L5A8MUK1 530 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 Q3C1V9 767 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 PHLDB3Q6NSJ2 640 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 LYPD8Q6UX82 237 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 FBXO41Q8TF61 875 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 CRBNQ96SW2 442 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 PANK3Q9H999 370 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 NCOA3Q9Y6Q9 1424 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 KANK1Q14678 1352 aa5.09□□□□□ -1.59
CLTC-209ENST00000498711 USP17L15C9J2P7 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L10C9JJH3 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L13C9JLJ4 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L12C9JPN9 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L11C9JVI0 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L21D6R901 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L18D6R9N7 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L22D6RA61 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L17D6RBQ6 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L19D6RCP7 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L20D6RJB6 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 SKIP12755 728 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 ARID4AP29374 1257 aaPredicted RBP5.09□□□□□ -1.6
CLTC-209ENST00000498711 PPP2R1AP30153 589 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 TMF1P82094 1093 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 SLFN5Q08AF3 891 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 USP17L24Q0WX57 530 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 CENPQQ7L2Z9 268 aaPredicted RBP5.09□□□□□ -1.6
CLTC-209ENST00000498711 AFAP1Q8N556 730 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 FKBPLQ9UIM3 349 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 CLTCL1P53675 1640 aa5.09□□□□□ -1.6
CLTC-209ENST00000498711 SSFA2P28290 1259 aa5.08□□□□□ -1.6
CLTC-209ENST00000498711 KMT5BQ4FZB7 885 aa5.08□□□□□ -1.6
CLTC-209ENST00000498711 USP32Q8NFA0 1604 aa5.08□□□□□ -1.6
CLTC-209ENST00000498711 ZC3H4Q9UPT8 1303 aaKnown RBP5.08□□□□□ -1.6
CLTC-209ENST00000498711 RNF40O75150 1001 aa5.08□□□□□ -1.6
CLTC-209ENST00000498711 HOXB1P14653 301 aaPredicted RBP5.08□□□□□ -1.6
CLTC-209ENST00000498711 C8orf34Q49A92 452 aa5.08□□□□□ -1.6
CLTC-209ENST00000498711 SAMD7Q7Z3H4 446 aa5.08□□□□□ -1.6
CLTC-209ENST00000498711 MORN1Q5T089 497 aa5.07□□□□□ -1.6
CLTC-209ENST00000498711 SLC4A5Q9BY07 1137 aa5.07□□□□□ -1.6
CLTC-209ENST00000498711 ESF1Q9H501 851 aaKnown RBP5.07□□□□□ -1.6
CLTC-209ENST00000498711 SBNO2Q9Y2G9 1366 aa5.07□□□□□ -1.6
CLTC-209ENST00000498711 NINLQ9Y2I6 1382 aa5.07□□□□□ -1.6
CLTC-209ENST00000498711 SETBP1Q9Y6X0 1596 aa5.07□□□□□ -1.6
CLTC-209ENST00000498711 CRTC2Q53ET0 693 aaPredicted RBP5.07□□□□□ -1.6
CLTC-209ENST00000498711 DNAJC14Q6Y2X3 702 aaPredicted RBP5.07□□□□□ -1.6
CLTC-209ENST00000498711 ZNF592Q92610 1267 aa5.07□□□□□ -1.6
CLTC-209ENST00000498711 ADAMTS8Q9UP79 889 aa5.07□□□□□ -1.6
CLTC-209ENST00000498711 TMEM131LA2VDJ0 1609 aa5.07□□□□□ -1.6
CLTC-209ENST00000498711 ALKQ9UM73 1620 aa5.07□□□□□ -1.6
CLTC-209ENST00000498711 ZNF326Q5BKZ1 582 aaKnown RBP5.07□□□□□ -1.6
CLTC-209ENST00000498711 LARP1Q6PKG0 1096 aaKnown RBP5.07□□□□□ -1.6
CLTC-209ENST00000498711 MKRN1Q9UHC7 482 aaKnown RBP5.07□□□□□ -1.6
CLTC-209ENST00000498711 SHPRHQ149N8 1683 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 ATP5J2-PTCD1G3V325 749 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 PSEN2P49810 448 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 PTK7Q13308 1070 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 AAMPQ13685 434 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 DEPDC4Q8N2C3 294 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 FAM174AQ8TBP5 190 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 FAM200AQ8TCP9 573 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 CLP1Q92989 425 aaKnown RBP5.06□□□□□ -1.6
CLTC-209ENST00000498711 SLC27A5Q9Y2P5 690 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 POLR3AO14802 1390 aaPredicted RBP5.06□□□□□ -1.6
CLTC-209ENST00000498711 USP19O94966 1318 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 PIK3R4Q99570 1358 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 POTEMA6NI47 508 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 SOWAHDA6NJG2 315 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 C20orf194Q5TEA3 1177 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 POTEGQ6S5H5 508 aa5.06□□□□□ -1.6
CLTC-209ENST00000498711 NPHP4O75161 1426 aaPredicted RBP5.05□□□□□ -1.6
CLTC-209ENST00000498711 F12P00748 615 aaPredicted RBP5.05□□□□□ -1.6
CLTC-209ENST00000498711 RASA1P20936 1047 aa5.05□□□□□ -1.6
CLTC-209ENST00000498711 NCOA4Q13772 614 aa5.05□□□□□ -1.6
CLTC-209ENST00000498711 SLFNL1Q499Z3 407 aa5.05□□□□□ -1.6
CLTC-209ENST00000498711 LAPTM4BQ86VI4 370 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms