RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 AFDNP55196 1824 aaKnown RBP34.83■■■■□ 3.17
CUL4A-211ENST00000498562 FCHSD2O94868 740 aa34.83■■■■□ 3.17
CUL4A-211ENST00000498562 NRXN2Q9P2S2 1712 aa34.82■■■■□ 3.16
CUL4A-211ENST00000498562 GNAT3A8MTJ3 354 aa34.82■■■■□ 3.16
CUL4A-211ENST00000498562 IL17REQ8NFR9 667 aa34.82■■■■□ 3.16
CUL4A-211ENST00000498562 TTC5Q8N0Z6 440 aa34.81■■■■□ 3.16
CUL4A-211ENST00000498562 NARFQ9UHQ1 456 aa34.81■■■■□ 3.16
CUL4A-211ENST00000498562 TEFQ10587 303 aa34.78■■■■□ 3.16
CUL4A-211ENST00000498562 ARHGAP27Q6ZUM4 889 aa34.78■■■■□ 3.16
CUL4A-211ENST00000498562 PIM2Q9P1W9 311 aa34.78■■■■□ 3.16
CUL4A-211ENST00000498562 CFAP53Q96M91 514 aa34.77■■■■□ 3.16
CUL4A-211ENST00000498562 CEMIPQ8WUJ3 1361 aa34.76■■■■□ 3.16
CUL4A-211ENST00000498562 ZNF790Q6PG37 636 aa34.76■■■■□ 3.16
CUL4A-211ENST00000498562 ZNF496Q96IT1 587 aaPredicted RBP34.76■■■■□ 3.16
CUL4A-211ENST00000498562 RSPH6AQ9H0K4 717 aa34.76■■■■□ 3.16
CUL4A-211ENST00000498562 BCL2L12Q9HB09 334 aa34.76■■■■□ 3.16
CUL4A-211ENST00000498562 HEG1Q9ULI3 1381 aa34.75■■■■□ 3.15
CUL4A-211ENST00000498562 CHRNA5P30532 468 aa34.75■■■■□ 3.15
CUL4A-211ENST00000498562 PRKAR2BP31323 418 aa34.75■■■■□ 3.15
CUL4A-211ENST00000498562 NFIXQ14938 502 aa34.75■■■■□ 3.15
CUL4A-211ENST00000498562 CEP350Q5VT06 3117 aa34.75■■■■□ 3.15
CUL4A-211ENST00000498562 CANXP27824 592 aaKnown RBP34.74■■■■□ 3.15
CUL4A-211ENST00000498562 PHACTR3Q96KR7 559 aa34.74■■■■□ 3.15
CUL4A-211ENST00000498562 SCN7AQ01118 1682 aa34.73■■■■□ 3.15
CUL4A-211ENST00000498562 KIF3CO14782 793 aa34.73■■■■□ 3.15
CUL4A-211ENST00000498562 STARD3NLO95772 234 aa34.73■■■■□ 3.15
CUL4A-211ENST00000498562 DLEC1Q9Y238 1755 aa34.72■■■■□ 3.15
CUL4A-211ENST00000498562 DALRD3Q5D0E6 543 aaKnown RBP34.72■■■■□ 3.15
CUL4A-211ENST00000498562 EIF5P55010 431 aaKnown RBP34.71■■■■□ 3.15
CUL4A-211ENST00000498562 PPP2R1AP30153 589 aa34.7■■■■□ 3.15
CUL4A-211ENST00000498562 NUDCQ9Y266 331 aa34.68■■■■□ 3.14
CUL4A-211ENST00000498562 TEX13AQ9BXU3 409 aaPredicted RBP34.67■■■■□ 3.14
CUL4A-211ENST00000498562 SERPINB2P05120 415 aa34.66■■■■□ 3.14
CUL4A-211ENST00000498562 FMNL2Q96PY5 1086 aa34.66■■■■□ 3.14
CUL4A-211ENST00000498562 A0A087WZG4 1122 aa34.65■■■■□ 3.14
CUL4A-211ENST00000498562 C9orf131Q5VYM1 1079 aa34.65■■■■□ 3.14
CUL4A-211ENST00000498562 HSPA6P17066 643 aa34.64■■■■□ 3.14
CUL4A-211ENST00000498562 SBF1O95248 1867 aa34.64■■■■□ 3.14
CUL4A-211ENST00000498562 CARMIL3Q8ND23 1372 aa34.63■■■■□ 3.13
CUL4A-211ENST00000498562 U2AF1L5P0DN76 240 aaPredicted RBP34.63■■■■□ 3.13
CUL4A-211ENST00000498562 U2AF1Q01081 240 aaKnown RBP eCLIP34.63■■■■□ 3.135e-9■□□□□ 10.7
CUL4A-211ENST00000498562 BTBD11A6QL63 1104 aa34.62■■■■□ 3.13
CUL4A-211ENST00000498562 KCNQ3O43525 872 aa34.62■■■■□ 3.13
CUL4A-211ENST00000498562 BCORQ6W2J9 1755 aa34.61■■■■□ 3.13
CUL4A-211ENST00000498562 ANKRD31Q8N7Z5 1873 aa34.61■■■■□ 3.13
CUL4A-211ENST00000498562 IL6STP40189 918 aaPredicted RBP34.6■■■■□ 3.13
CUL4A-211ENST00000498562 BICDL1Q6ZP65 573 aa34.6■■■■□ 3.13
CUL4A-211ENST00000498562 TBC1D9BQ66K14 1250 aa34.59■■■■□ 3.13
CUL4A-211ENST00000498562 A1BGP04217 495 aa34.58■■■■□ 3.13
CUL4A-211ENST00000498562 NMRK2Q9NPI5 230 aa34.58■■■■□ 3.13
CUL4A-211ENST00000498562 ZNF330Q9Y3S2 320 aaPredicted RBP34.58■■■■□ 3.13
CUL4A-211ENST00000498562 RNF181Q9P0P0 153 aa34.57■■■■□ 3.12
CUL4A-211ENST00000498562 TBC1D2BQ9UPU7 963 aa34.57■■■■□ 3.12
CUL4A-211ENST00000498562 MCM10Q7L590 875 aa34.56■■■■□ 3.12
CUL4A-211ENST00000498562 RTF1Q92541 710 aaKnown RBP34.55■■■■□ 3.12
CUL4A-211ENST00000498562 COL11A2P13942 1736 aaPredicted RBP34.54■■■■□ 3.12
CUL4A-211ENST00000498562 TOMM70O94826 608 aa34.53■■■■□ 3.12
CUL4A-211ENST00000498562 C2CD5Q86YS7 1000 aa34.53■■■■□ 3.12
CUL4A-211ENST00000498562 CAMTA2O94983 1202 aa34.52■■■■□ 3.12
CUL4A-211ENST00000498562 RASSF7Q02833 373 aa34.52■■■■□ 3.12
CUL4A-211ENST00000498562 TTLL6Q8N841 843 aa34.52■■■■□ 3.12
CUL4A-211ENST00000498562 USP16Q9Y5T5 823 aa34.52■■■■□ 3.12
CUL4A-211ENST00000498562 PRAMEF22A3QJZ6 481 aa34.51■■■■□ 3.12
CUL4A-211ENST00000498562 DCTN1Q14203 1278 aa34.51■■■■□ 3.12
CUL4A-211ENST00000498562 TNRC6CQ9HCJ0 1690 aaKnown RBP34.5■■■■□ 3.11
CUL4A-211ENST00000498562 H0YIN7 160 aa34.5■■■■□ 3.11
CUL4A-211ENST00000498562 DLG5Q8TDM6 1919 aa34.49■■■■□ 3.11
CUL4A-211ENST00000498562 HTATSF1O43719 755 aaKnown RBP34.49■■■■□ 3.11
CUL4A-211ENST00000498562 PRR5LQ6MZQ0 368 aa34.49■■■■□ 3.11
CUL4A-211ENST00000498562 NPM2Q86SE8 214 aaKnown RBP34.49■■■■□ 3.11
CUL4A-211ENST00000498562 SNRPA1P09661 255 aaKnown RBP34.47■■■■□ 3.11
CUL4A-211ENST00000498562 PIP4K2AP48426 406 aaPredicted RBP34.47■■■■□ 3.11
CUL4A-211ENST00000498562 DZIP3Q86Y13 1208 aaKnown RBP34.47■■■■□ 3.11
CUL4A-211ENST00000498562 TIAM2Q8IVF5 1701 aa34.47■■■■□ 3.11
CUL4A-211ENST00000498562 BRIP1Q9BX63 1249 aa34.46■■■■□ 3.11
CUL4A-211ENST00000498562 KDM2BQ8NHM5 1336 aa34.46■■■■□ 3.11
CUL4A-211ENST00000498562 LAMB4A4D0S4 1761 aa34.45■■■■□ 3.11
CUL4A-211ENST00000498562 PRELPP51888 382 aa34.45■■■■□ 3.11
CUL4A-211ENST00000498562 CCDC24Q8N4L8 307 aa34.45■■■■□ 3.11
CUL4A-211ENST00000498562 CCDC88AQ3V6T2 1871 aa34.45■■■■□ 3.11
CUL4A-211ENST00000498562 PDZRN3Q9UPQ7 1066 aa34.44■■■■□ 3.1
CUL4A-211ENST00000498562 ZC3H4Q9UPT8 1303 aaKnown RBP34.44■■■■□ 3.1
CUL4A-211ENST00000498562 LMNB1P20700 586 aa34.43■■■■□ 3.1
CUL4A-211ENST00000498562 PDE6BP35913 854 aa34.43■■■■□ 3.1
CUL4A-211ENST00000498562 SETDB2Q96T68 719 aa34.43■■■■□ 3.1
CUL4A-211ENST00000498562 KDM3BQ7LBC6 1761 aa34.43■■■■□ 3.1
CUL4A-211ENST00000498562 RBM46Q8TBY0 533 aaKnown RBP34.42■■■■□ 3.1
CUL4A-211ENST00000498562 NFKBIEO00221 500 aa34.41■■■■□ 3.1
CUL4A-211ENST00000498562 CNBD1Q8NA66 436 aa34.41■■■■□ 3.1
CUL4A-211ENST00000498562 APLP1P51693 650 aa34.4■■■■□ 3.1
CUL4A-211ENST00000498562 TAF7Q15545 349 aaPredicted RBP34.4■■■■□ 3.1
CUL4A-211ENST00000498562 ZNF622Q969S3 477 aaKnown RBP eCLIP34.4■■■■□ 3.1
CUL4A-211ENST00000498562 CACNA1SQ13698 1873 aa34.39■■■■□ 3.1
CUL4A-211ENST00000498562 FER1L6Q2WGJ9 1857 aa34.39■■■■□ 3.1
CUL4A-211ENST00000498562 ARFGEF2Q9Y6D5 1785 aa34.39■■■■□ 3.1
CUL4A-211ENST00000498562 C16orf71Q8IYS4 520 aaPredicted RBP34.38■■■■□ 3.09
CUL4A-211ENST00000498562 PLEKHF1Q96S99 279 aa34.38■■■■□ 3.09
CUL4A-211ENST00000498562 RRAGCQ9HB90 399 aa34.38■■■■□ 3.09
CUL4A-211ENST00000498562 NBPF26B4DH59 902 aa34.37■■■■□ 3.09
CUL4A-211ENST00000498562 ST5P78524 1137 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms