RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 ADRA2BP18089 450 aa20.77■□□□□ 0.92
SSBP1-214ENST00000498107 MBIPQ9NS73 344 aa20.77■□□□□ 0.92
SSBP1-214ENST00000498107 UBR3Q6ZT12 1888 aa20.76■□□□□ 0.91
SSBP1-214ENST00000498107 PNPLA7Q6ZV29 1317 aa20.76■□□□□ 0.91
SSBP1-214ENST00000498107 INTS5Q6P9B9 1019 aaKnown RBP20.75■□□□□ 0.91
SSBP1-214ENST00000498107 SLC16A10Q8TF71 515 aa20.75■□□□□ 0.91
SSBP1-214ENST00000498107 MYH14Q7Z406 1995 aaKnown RBP20.75■□□□□ 0.91
SSBP1-214ENST00000498107 TUBGCP6Q96RT7 1819 aa20.74■□□□□ 0.91
SSBP1-214ENST00000498107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.74■□□□□ 0.91
SSBP1-214ENST00000498107 HOXB7P09629 217 aa20.74■□□□□ 0.91
SSBP1-214ENST00000498107 TRAPPC3LQ5T215 181 aa20.74■□□□□ 0.91
SSBP1-214ENST00000498107 NPM2Q86SE8 214 aaKnown RBP20.74■□□□□ 0.91
SSBP1-214ENST00000498107 CHMP4AQ9BY43 222 aa20.74■□□□□ 0.91
SSBP1-214ENST00000498107 MYH16Q9H6N6 1097 aa20.74■□□□□ 0.91
SSBP1-214ENST00000498107 USP16Q9Y5T5 823 aa20.74■□□□□ 0.91
SSBP1-214ENST00000498107 LAMB4A4D0S4 1761 aa20.74■□□□□ 0.91
SSBP1-214ENST00000498107 MSH5O43196 834 aa20.73■□□□□ 0.91
SSBP1-214ENST00000498107 PHF14O94880 888 aa20.73■□□□□ 0.91
SSBP1-214ENST00000498107 COL23A1Q86Y22 540 aaPredicted RBP20.72■□□□□ 0.91
SSBP1-214ENST00000498107 ZBTB1Q9Y2K1 713 aa20.72■□□□□ 0.91
SSBP1-214ENST00000498107 SOS1Q07889 1333 aaPredicted RBP20.72■□□□□ 0.91
SSBP1-214ENST00000498107 ZNF521Q96K83 1311 aa20.72■□□□□ 0.91
SSBP1-214ENST00000498107 CASZ1Q86V15 1759 aa20.72■□□□□ 0.91
SSBP1-214ENST00000498107 A0A087WZG4 1122 aa20.71■□□□□ 0.91
SSBP1-214ENST00000498107 PRAMEF22A3QJZ6 481 aa20.71■□□□□ 0.91
SSBP1-214ENST00000498107 CANXP27824 592 aaKnown RBP20.71■□□□□ 0.91
SSBP1-214ENST00000498107 IL6STP40189 918 aaPredicted RBP20.71■□□□□ 0.91
SSBP1-214ENST00000498107 GOLGA2Q08379 1002 aa20.71■□□□□ 0.91
SSBP1-214ENST00000498107 ERBB4Q15303 1308 aa20.71■□□□□ 0.91
SSBP1-214ENST00000498107 RFC4P35249 363 aa20.7■□□□□ 0.9
SSBP1-214ENST00000498107 A1BGP04217 495 aa20.69■□□□□ 0.9
SSBP1-214ENST00000498107 MTFR1LQ9H019 292 aa20.69■□□□□ 0.9
SSBP1-214ENST00000498107 E9PSI1 815 aa20.68■□□□□ 0.9
SSBP1-214ENST00000498107 HNRNPUQ00839 825 aaKnown RBP eCLIP20.68■□□□□ 0.9
SSBP1-214ENST00000498107 DUSP27Q5VZP5 1158 aa20.68■□□□□ 0.9
SSBP1-214ENST00000498107 ARHGEF1Q92888 912 aaKnown RBP20.68■□□□□ 0.9
SSBP1-214ENST00000498107 TSR2Q969E8 191 aaKnown RBP20.68■□□□□ 0.9
SSBP1-214ENST00000498107 COL15A1P39059 1388 aa20.68■□□□□ 0.9
SSBP1-214ENST00000498107 EIF2S2P20042 333 aaKnown RBP20.67■□□□□ 0.9
SSBP1-214ENST00000498107 EIF5P55010 431 aaKnown RBP20.67■□□□□ 0.9
SSBP1-214ENST00000498107 AMIGO3Q86WK7 504 aa20.67■□□□□ 0.9
SSBP1-214ENST00000498107 PDGFDQ9GZP0 370 aaPredicted RBP20.67■□□□□ 0.9
SSBP1-214ENST00000498107 SPON1Q9HCB6 807 aa20.67■□□□□ 0.9
SSBP1-214ENST00000498107 FANCIQ9NVI1 1328 aa20.67■□□□□ 0.9
SSBP1-214ENST00000498107 ZPR1O75312 459 aa20.66■□□□□ 0.9
SSBP1-214ENST00000498107 KRT24Q2M2I5 525 aa20.66■□□□□ 0.9
SSBP1-214ENST00000498107 ZNF330Q9Y3S2 320 aaPredicted RBP20.66■□□□□ 0.9
SSBP1-214ENST00000498107 ZBTB7AO95365 584 aa20.65■□□□□ 0.9
SSBP1-214ENST00000498107 HDGFL1Q5TGJ6 251 aa20.65■□□□□ 0.9
SSBP1-214ENST00000498107 SMIM5Q71RC9 77 aa20.64■□□□□ 0.89
SSBP1-214ENST00000498107 C8orf58Q8NAV2 365 aa20.64■□□□□ 0.89
SSBP1-214ENST00000498107 USP42Q9H9J4 1324 aaKnown RBP20.63■□□□□ 0.89
SSBP1-214ENST00000498107 NBPF26B4DH59 902 aa20.63■□□□□ 0.89
SSBP1-214ENST00000498107 ELL2O00472 640 aaPredicted RBP20.63■□□□□ 0.89
SSBP1-214ENST00000498107 NBPF10Q6P3W6 841 aaKnown RBP20.63■□□□□ 0.89
SSBP1-214ENST00000498107 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
SSBP1-214ENST00000498107 NBPF15Q8N660 670 aa20.63■□□□□ 0.89
SSBP1-214ENST00000498107 SPINK5Q9NQ38 1064 aaPredicted RBP20.63■□□□□ 0.89
SSBP1-214ENST00000498107 NARFQ9UHQ1 456 aa20.63■□□□□ 0.89
SSBP1-214ENST00000498107 C4AP0C0L4 1744 aa20.63■□□□□ 0.89
SSBP1-214ENST00000498107 POLD1P28340 1107 aa20.62■□□□□ 0.89
SSBP1-214ENST00000498107 SLFN5Q08AF3 891 aa20.62■□□□□ 0.89
SSBP1-214ENST00000498107 TWISTNBQ3B726 338 aaPredicted RBP20.62■□□□□ 0.89
SSBP1-214ENST00000498107 CCDC30Q5VVM6 783 aa20.62■□□□□ 0.89
SSBP1-214ENST00000498107 DBF4Q9UBU7 674 aaPredicted RBP20.62■□□□□ 0.89
SSBP1-214ENST00000498107 ATF5Q9Y2D1 282 aaPredicted RBP20.62■□□□□ 0.89
SSBP1-214ENST00000498107 PIP4K2AP48426 406 aaPredicted RBP20.61■□□□□ 0.89
SSBP1-214ENST00000498107 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
SSBP1-214ENST00000498107 ARXQ96QS3 562 aa20.61■□□□□ 0.89
SSBP1-214ENST00000498107 DDX21Q9NR30 783 aaKnown RBP eCLIP20.61■□□□□ 0.89
SSBP1-214ENST00000498107 MYL6BP14649 208 aa20.6■□□□□ 0.89
SSBP1-214ENST00000498107 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
SSBP1-214ENST00000498107 NECTIN2Q92692 538 aa20.6■□□□□ 0.89
SSBP1-214ENST00000498107 ZBED9Q6R2W3 1325 aa20.59■□□□□ 0.89
SSBP1-214ENST00000498107 RGL2O15211 777 aa20.59■□□□□ 0.89
SSBP1-214ENST00000498107 GYS1P13807 737 aa20.59■□□□□ 0.89
SSBP1-214ENST00000498107 PDIA6Q15084 440 aa20.59■□□□□ 0.89
SSBP1-214ENST00000498107 TSPYL6Q8N831 410 aa20.59■□□□□ 0.89
SSBP1-214ENST00000498107 HYPKQ9NX55 129 aa20.59■□□□□ 0.89
SSBP1-214ENST00000498107 LRP5O75197 1615 aa20.59■□□□□ 0.89
SSBP1-214ENST00000498107 USPL1Q5W0Q7 1092 aa20.58■□□□□ 0.89
SSBP1-214ENST00000498107 MSL1Q68DK7 614 aa20.58■□□□□ 0.89
SSBP1-214ENST00000498107 KIF6Q6ZMV9 814 aa20.58■□□□□ 0.89
SSBP1-214ENST00000498107 STK31Q9BXU1 1019 aa20.58■□□□□ 0.89
SSBP1-214ENST00000498107 CHPF2Q9P2E5 772 aa20.58■□□□□ 0.89
SSBP1-214ENST00000498107 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
SSBP1-214ENST00000498107 TBC1D2BQ9UPU7 963 aa20.58■□□□□ 0.89
SSBP1-214ENST00000498107 ZNF652Q9Y2D9 606 aa20.58■□□□□ 0.89
SSBP1-214ENST00000498107 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.88
SSBP1-214ENST00000498107 CLEC4GQ6UXB4 293 aa20.56■□□□□ 0.88
SSBP1-214ENST00000498107 TRMT2AQ8IZ69 625 aaKnown RBP20.56■□□□□ 0.88
SSBP1-214ENST00000498107 CDCA7LQ96GN5 454 aa20.56■□□□□ 0.88
SSBP1-214ENST00000498107 PPP1R1BQ9UD71 204 aaPredicted RBP20.56■□□□□ 0.88
SSBP1-214ENST00000498107 ERVV-1B6SEH8 477 aa20.55■□□□□ 0.88
SSBP1-214ENST00000498107 VAMP4O75379 141 aa20.55■□□□□ 0.88
SSBP1-214ENST00000498107 CAMTA2O94983 1202 aa20.55■□□□□ 0.88
SSBP1-214ENST00000498107 PTGER2P43116 358 aa20.55■□□□□ 0.88
SSBP1-214ENST00000498107 SGIP1Q9BQI5 828 aa20.55■□□□□ 0.88
SSBP1-214ENST00000498107 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
SSBP1-214ENST00000498107 FKBP8Q14318 412 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms