RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 NLRP8Q86W28 1048 aa9.38□□□□□ -0.91
SMC4-227ENST00000497984 ALG2Q9H553 416 aa9.38□□□□□ -0.91
SMC4-227ENST00000497984 PCDHGC4Q9Y5F7 938 aa9.38□□□□□ -0.91
SMC4-227ENST00000497984 A6NJY4 79 aa9.37□□□□□ -0.91
SMC4-227ENST00000497984 CDK2AP1O14519 115 aa9.37□□□□□ -0.91
SMC4-227ENST00000497984 FIGNL1Q6PIW4 674 aa9.37□□□□□ -0.91
SMC4-227ENST00000497984 SLCO4C1Q6ZQN7 724 aa9.37□□□□□ -0.91
SMC4-227ENST00000497984 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
SMC4-227ENST00000497984 GGA1Q9UJY5 639 aa9.37□□□□□ -0.91
SMC4-227ENST00000497984 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
SMC4-227ENST00000497984 SPOCK3Q9BQ16 436 aa9.36□□□□□ -0.91
SMC4-227ENST00000497984 PROCP04070 461 aa9.35□□□□□ -0.91
SMC4-227ENST00000497984 EML3Q32P44 896 aa9.35□□□□□ -0.91
SMC4-227ENST00000497984 POM121Q96HA1 1249 aa9.35□□□□□ -0.91
SMC4-227ENST00000497984 ZDHHC3Q9NYG2 299 aa9.35□□□□□ -0.91
SMC4-227ENST00000497984 MKL2Q9ULH7 1088 aa9.35□□□□□ -0.91
SMC4-227ENST00000497984 A0A1W2PNR3 127 aa9.34□□□□□ -0.91
SMC4-227ENST00000497984 MSTNO14793 375 aa9.34□□□□□ -0.91
SMC4-227ENST00000497984 ATXN7O15265 892 aaPredicted RBP9.34□□□□□ -0.91
SMC4-227ENST00000497984 ARAFP10398 606 aa9.34□□□□□ -0.91
SMC4-227ENST00000497984 SKIP12755 728 aa9.34□□□□□ -0.91
SMC4-227ENST00000497984 COL8A1P27658 744 aa9.34□□□□□ -0.91
SMC4-227ENST00000497984 NFATC2IPQ8NCF5 419 aa9.34□□□□□ -0.91
SMC4-227ENST00000497984 LZTS3O60299 673 aaPredicted RBP9.33□□□□□ -0.92
SMC4-227ENST00000497984 EPXP11678 715 aa9.33□□□□□ -0.92
SMC4-227ENST00000497984 TNP2Q05952 138 aa9.33□□□□□ -0.92
SMC4-227ENST00000497984 NBPF1Q3BBV0 1214 aa9.33□□□□□ -0.92
SMC4-227ENST00000497984 LINC00114Q6XXX2 140 aa9.33□□□□□ -0.92
SMC4-227ENST00000497984 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
SMC4-227ENST00000497984 DCDC2BA2VCK2 349 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 KRBA1A5PL33 1030 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 MAPTP10636 758 aaKnown RBP9.32□□□□□ -0.92
SMC4-227ENST00000497984 GTF2IP78347 998 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 NCOA4Q13772 614 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 ARSJQ5FYB0 599 aaPredicted RBP9.32□□□□□ -0.92
SMC4-227ENST00000497984 FAM182BQ5T319 152 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 PSMG3-AS1Q96PY0 264 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 RRAGCQ9HB90 399 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 ZNF358Q9NW07 568 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 CABP1Q9NZU7 370 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 NOD1Q9Y239 953 aa9.32□□□□□ -0.92
SMC4-227ENST00000497984 NEURL1BA8MQ27 555 aa9.31□□□□□ -0.92
SMC4-227ENST00000497984 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMC4-227ENST00000497984 ZDHHC1Q8WTX9 485 aa9.31□□□□□ -0.92
SMC4-227ENST00000497984 BTBD6Q96KE9 485 aa9.31□□□□□ -0.92
SMC4-227ENST00000497984 SCHIP1Q9P0W5 487 aaPredicted RBP9.31□□□□□ -0.92
SMC4-227ENST00000497984 KLF15Q9UIH9 416 aa9.31□□□□□ -0.92
SMC4-227ENST00000497984 BACH1O14867 736 aa9.3□□□□□ -0.92
SMC4-227ENST00000497984 TATP17735 454 aaPredicted RBP9.3□□□□□ -0.92
SMC4-227ENST00000497984 CD33P20138 364 aa9.3□□□□□ -0.92
SMC4-227ENST00000497984 EPHA4P54764 986 aa9.3□□□□□ -0.92
SMC4-227ENST00000497984 SUV39H2Q9H5I1 410 aa9.3□□□□□ -0.92
SMC4-227ENST00000497984 PARP3Q9Y6F1 533 aa9.3□□□□□ -0.92
SMC4-227ENST00000497984 USP17L5A8MUK1 530 aa9.29□□□□□ -0.92
SMC4-227ENST00000497984 ADAM23O75077 832 aa9.29□□□□□ -0.92
SMC4-227ENST00000497984 FAM157BP0CG42 384 aa9.29□□□□□ -0.92
SMC4-227ENST00000497984 AMPD1P23109 780 aa9.29□□□□□ -0.92
SMC4-227ENST00000497984 TXLNAP40222 546 aa9.29□□□□□ -0.92
SMC4-227ENST00000497984 SAMD5Q5TGI4 173 aa9.29□□□□□ -0.92
SMC4-227ENST00000497984 DEPDC4Q8N2C3 294 aa9.29□□□□□ -0.92
SMC4-227ENST00000497984 ADAMTS19Q8TE59 1207 aa9.29□□□□□ -0.92
SMC4-227ENST00000497984 POM121CA8CG34 1229 aa9.28□□□□□ -0.92
SMC4-227ENST00000497984 KHNYNO15037 678 aaKnown RBP9.28□□□□□ -0.92
SMC4-227ENST00000497984 DGKGP49619 791 aa9.28□□□□□ -0.92
SMC4-227ENST00000497984 ALYREFQ86V81 257 aaKnown RBP9.28□□□□□ -0.92
SMC4-227ENST00000497984 KRTAP1-3Q8IUG1 177 aa9.28□□□□□ -0.92
SMC4-227ENST00000497984 AVENQ9NQS1 362 aaPredicted RBP9.28□□□□□ -0.92
SMC4-227ENST00000497984 EFSO43281 561 aa9.27□□□□□ -0.93
SMC4-227ENST00000497984 TEAD4Q15561 434 aa9.27□□□□□ -0.93
SMC4-227ENST00000497984 FCHSD1Q86WN1 690 aa9.27□□□□□ -0.93
SMC4-227ENST00000497984 ADH6P28332 368 aa9.26□□□□□ -0.93
SMC4-227ENST00000497984 PSME1Q06323 249 aa9.26□□□□□ -0.93
SMC4-227ENST00000497984 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
SMC4-227ENST00000497984 L3MBTL2Q969R5 705 aa9.26□□□□□ -0.93
SMC4-227ENST00000497984 STRN4Q9NRL3 753 aa9.26□□□□□ -0.93
SMC4-227ENST00000497984 EML1O00423 815 aa9.25□□□□□ -0.93
SMC4-227ENST00000497984 GNB5O14775 395 aa9.25□□□□□ -0.93
SMC4-227ENST00000497984 ZBTB7BO15156 539 aaPredicted RBP9.25□□□□□ -0.93
SMC4-227ENST00000497984 GRIN2CQ14957 1233 aa9.25□□□□□ -0.93
SMC4-227ENST00000497984 CHSY3Q70JA7 882 aa9.25□□□□□ -0.93
SMC4-227ENST00000497984 SLC9A9Q8IVB4 645 aa9.25□□□□□ -0.93
SMC4-227ENST00000497984 C7orf43Q8WVR3 580 aa9.25□□□□□ -0.93
SMC4-227ENST00000497984 KIAA1024Q9UPX6 916 aa9.25□□□□□ -0.93
SMC4-227ENST00000497984 RAD21O60216 631 aa9.24□□□□□ -0.93
SMC4-227ENST00000497984 NOS2P35228 1153 aa9.24□□□□□ -0.93
SMC4-227ENST00000497984 TBCELQ5QJ74 424 aa9.24□□□□□ -0.93
SMC4-227ENST00000497984 ZNF468Q5VIY5 522 aaPredicted RBP9.24□□□□□ -0.93
SMC4-227ENST00000497984 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
SMC4-227ENST00000497984 PLEKHM2Q8IWE5 1019 aa9.24□□□□□ -0.93
SMC4-227ENST00000497984 TNS4Q8IZW8 715 aa9.24□□□□□ -0.93
SMC4-227ENST00000497984 UCN2Q96RP3 112 aa9.24□□□□□ -0.93
SMC4-227ENST00000497984 MARK1Q9P0L2 795 aa9.24□□□□□ -0.93
SMC4-227ENST00000497984 GJA3Q9Y6H8 435 aa9.24□□□□□ -0.93
SMC4-227ENST00000497984 PCBP4P57723 403 aaKnown RBP9.23□□□□□ -0.93
SMC4-227ENST00000497984 LAMC2Q13753 1193 aa9.23□□□□□ -0.93
SMC4-227ENST00000497984 USP17L3A6NCW0 530 aa9.22□□□□□ -0.93
SMC4-227ENST00000497984 USP17L4A6NCW7 530 aa9.22□□□□□ -0.93
SMC4-227ENST00000497984 CLDN10P78369 228 aa9.22□□□□□ -0.93
SMC4-227ENST00000497984 FLIIQ13045 1269 aa9.22□□□□□ -0.93
SMC4-227ENST00000497984 SH3PXD2AQ5TCZ1 1133 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms