RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 DNAJC5GQ8N7S2 189 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 GAS2L2Q8NHY3 880 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 ADAM32Q8TC27 787 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 HELQQ8TDG4 1101 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 NEURL4Q96JN8 1562 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 ZFRQ96KR1 1074 aaKnown RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 NBPF3Q9H094 633 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 CUEDC1Q9NWM3 386 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 SEPT9Q9UHD8 586 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 WWC3Q9ULE0 1092 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 NINLQ9Y2I6 1382 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 ABCA9Q8IUA7 1624 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 FGD6Q6ZV73 1430 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 H3BRB1 525 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 NR1I2O75469 434 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 CDK11BP21127 795 aaKnown RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 IGFBP4P22692 258 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 GTF2IP78347 998 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 R3HDM1Q15032 1099 aaKnown RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 RNF20Q5VTR2 975 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 CCDC102BQ68D86 513 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 GLYCTKQ8IVS8 523 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 SCUBE3Q8IX30 993 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 GTF3C2Q8WUA4 911 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 BCL11AQ9H165 835 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 ESF1Q9H501 851 aaKnown RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 TUT1Q9H6E5 874 aaKnown RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 CDK11AQ9UQ88 783 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 DNMT3AQ9Y6K1 912 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 STRCP1A6NGW2 1772 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 A0A0C4DFX4 3053 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 ZNF142P52746 1687 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 ROBO1Q9Y6N7 1651 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TNS2Q63HR2 1409 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 CACNA1AO00555 2505 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 HRO43593 1189 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 PSEN2P49810 448 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 HDLBPQ00341 1268 aaKnown RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TAGLNQ01995 201 aaKnown RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TSGA10IPQ3SY00 556 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 EAPPQ56P03 285 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 DMRTA1Q5VZB9 504 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TMC4Q7Z404 712 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 FAM160A2Q8N612 972 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 SP7Q8TDD2 431 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 PIK3R5Q8WYR1 880 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 FAM129BQ96TA1 746 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TINF2Q9BSI4 451 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 BACH2Q9BYV9 841 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 NLRP2Q9NX02 1062 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 CDV3Q9UKY7 258 aaKnown RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 DOLKQ9UPQ8 538 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 SYNMO15061 1565 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 CEP170BQ9Y4F5 1589 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 CNTLNQ9NXG0 1405 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 DISP1Q96F81 1524 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 HECW1Q76N89 1606 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 POTEB2H3BUK9 544 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 FAM13AO94988 1023 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 MAPK1P28482 360 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 SCNN1AP37088 669 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 EPHA4P54764 986 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 FKBP5Q13451 457 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 PUS10Q3MIT2 529 aaKnown RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 NOP9Q86U38 636 aaKnown RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 ANKLE2Q86XL3 938 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZNF594Q96JF6 807 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 DMRTB1Q96MA1 342 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 NUDT12Q9BQG2 462 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 ARHGAP9Q9BRR9 750 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 TGIF2Q9GZN2 237 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 BIN2Q9UBW5 565 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 MYT1LQ9UL68 1186 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 PCDHB9Q9Y5E1 797 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZMYM3Q14202 1370 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 PDE4DIPQ5VU43 2346 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 CAMTA1Q9Y6Y1 1673 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 WRNQ14191 1432 aaPredicted RBP eCLIP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 CHD4Q14839 1912 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 SOWAHBA6NEL2 793 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 PRMT3O60678 531 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 PRPF40AO75400 957 aaKnown RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 P4HBP07237 508 aaKnown RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 DAB2P98082 770 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 USP4Q13107 963 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZNF211Q13398 564 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 ERFEQ4G0M1 354 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 TMC7Q7Z402 723 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZNF687Q8N1G0 1237 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 LRCH3Q96II8 777 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 PRKD2Q9BZL6 878 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 SCUBE2Q9NQ36 999 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 SEPT3Q9UH03 358 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 MED14O60244 1454 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 ABCA8O94911 1581 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 PHLPP1O60346 1717 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 COL16A1Q07092 1604 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 AGLP35573 1532 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms