RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 CCDC87Q9NVE4 849 aa20.49■□□□□ 0.87
PMF1-205ENST00000497069 C4BP0C0L5 1744 aa20.48■□□□□ 0.87
PMF1-205ENST00000497069 GNPATO15228 680 aa20.48■□□□□ 0.87
PMF1-205ENST00000497069 HOXB7P09629 217 aa20.48■□□□□ 0.87
PMF1-205ENST00000497069 KRT24Q2M2I5 525 aa20.48■□□□□ 0.87
PMF1-205ENST00000497069 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
PMF1-205ENST00000497069 ELL2O00472 640 aaPredicted RBP20.47■□□□□ 0.87
PMF1-205ENST00000497069 EIF2S2P20042 333 aaKnown RBP20.47■□□□□ 0.87
PMF1-205ENST00000497069 CDCA7LQ96GN5 454 aa20.47■□□□□ 0.87
PMF1-205ENST00000497069 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
PMF1-205ENST00000497069 CHMP4AQ9BY43 222 aa20.47■□□□□ 0.87
PMF1-205ENST00000497069 RTCBQ9Y3I0 505 aaKnown RBP20.47■□□□□ 0.87
PMF1-205ENST00000497069 TAF1LQ8IZX4 1826 aa20.46■□□□□ 0.87
PMF1-205ENST00000497069 CANXP27824 592 aaKnown RBP20.46■□□□□ 0.87
PMF1-205ENST00000497069 R3HDM1Q15032 1099 aaKnown RBP20.46■□□□□ 0.87
PMF1-205ENST00000497069 NPM2Q86SE8 214 aaKnown RBP20.46■□□□□ 0.87
PMF1-205ENST00000497069 C8orf58Q8NAV2 365 aa20.46■□□□□ 0.87
PMF1-205ENST00000497069 COL5A3P25940 1745 aaPredicted RBP20.46■□□□□ 0.87
PMF1-205ENST00000497069 SOS1Q07889 1333 aaPredicted RBP20.46■□□□□ 0.87
PMF1-205ENST00000497069 RPS6KA4O75676 772 aa20.45■□□□□ 0.86
PMF1-205ENST00000497069 A1BGP04217 495 aa20.45■□□□□ 0.86
PMF1-205ENST00000497069 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
PMF1-205ENST00000497069 INTS5Q6P9B9 1019 aaKnown RBP20.45■□□□□ 0.86
PMF1-205ENST00000497069 FLAD1Q8NFF5 587 aa20.45■□□□□ 0.86
PMF1-205ENST00000497069 ZBTB1Q9Y2K1 713 aa20.45■□□□□ 0.86
PMF1-205ENST00000497069 PHF14O94880 888 aa20.44■□□□□ 0.86
PMF1-205ENST00000497069 SSFA2P28290 1259 aa20.44■□□□□ 0.86
PMF1-205ENST00000497069 TWISTNBQ3B726 338 aaPredicted RBP20.44■□□□□ 0.86
PMF1-205ENST00000497069 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
PMF1-205ENST00000497069 MSH5O43196 834 aa20.43■□□□□ 0.86
PMF1-205ENST00000497069 NECTIN2Q92692 538 aa20.43■□□□□ 0.86
PMF1-205ENST00000497069 ZNF330Q9Y3S2 320 aaPredicted RBP20.43■□□□□ 0.86
PMF1-205ENST00000497069 LAMB4A4D0S4 1761 aa20.42■□□□□ 0.86
PMF1-205ENST00000497069 PSDA5PKW4 1024 aaPredicted RBP20.42■□□□□ 0.86
PMF1-205ENST00000497069 TRAPPC3LQ5T215 181 aa20.42■□□□□ 0.86
PMF1-205ENST00000497069 TSPYL6Q8N831 410 aa20.42■□□□□ 0.86
PMF1-205ENST00000497069 ERBB4Q15303 1308 aa20.42■□□□□ 0.86
PMF1-205ENST00000497069 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.41■□□□□ 0.86
PMF1-205ENST00000497069 ADRA2BP18089 450 aa20.41■□□□□ 0.86
PMF1-205ENST00000497069 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
PMF1-205ENST00000497069 TRMT2AQ8IZ69 625 aaKnown RBP20.41■□□□□ 0.86
PMF1-205ENST00000497069 PIP4K2AP48426 406 aaPredicted RBP20.4■□□□□ 0.86
PMF1-205ENST00000497069 CCDC30Q5VVM6 783 aa20.4■□□□□ 0.86
PMF1-205ENST00000497069 PNPLA7Q6ZV29 1317 aa20.4■□□□□ 0.86
PMF1-205ENST00000497069 A0A087WZG4 1122 aa20.39■□□□□ 0.85
PMF1-205ENST00000497069 MYL6BP14649 208 aa20.39■□□□□ 0.85
PMF1-205ENST00000497069 RFC4P35249 363 aa20.39■□□□□ 0.85
PMF1-205ENST00000497069 SMIM5Q71RC9 77 aa20.39■□□□□ 0.85
PMF1-205ENST00000497069 ARXQ96QS3 562 aa20.39■□□□□ 0.85
PMF1-205ENST00000497069 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
PMF1-205ENST00000497069 ARHGEF1Q92888 912 aaKnown RBP20.38■□□□□ 0.85
PMF1-205ENST00000497069 STK31Q9BXU1 1019 aa20.38■□□□□ 0.85
PMF1-205ENST00000497069 DBF4Q9UBU7 674 aaPredicted RBP20.38■□□□□ 0.85
PMF1-205ENST00000497069 COL15A1P39059 1388 aa20.37■□□□□ 0.85
PMF1-205ENST00000497069 NBPF26B4DH59 902 aa20.37■□□□□ 0.85
PMF1-205ENST00000497069 VAMP4O75379 141 aa20.37■□□□□ 0.85
PMF1-205ENST00000497069 NBPF10Q6P3W6 841 aaKnown RBP20.37■□□□□ 0.85
PMF1-205ENST00000497069 AMIGO3Q86WK7 504 aa20.37■□□□□ 0.85
PMF1-205ENST00000497069 COL23A1Q86Y22 540 aaPredicted RBP20.37■□□□□ 0.85
PMF1-205ENST00000497069 NBPF15Q8N660 670 aa20.37■□□□□ 0.85
PMF1-205ENST00000497069 DDX21Q9NR30 783 aaKnown RBP eCLIP20.37■□□□□ 0.85
PMF1-205ENST00000497069 CHPF2Q9P2E5 772 aa20.37■□□□□ 0.85
PMF1-205ENST00000497069 MYH14Q7Z406 1995 aaKnown RBP20.35■□□□□ 0.85
PMF1-205ENST00000497069 UBR3Q6ZT12 1888 aa20.35■□□□□ 0.85
PMF1-205ENST00000497069 ZPR1O75312 459 aa20.35■□□□□ 0.85
PMF1-205ENST00000497069 HYPKQ9NX55 129 aa20.35■□□□□ 0.85
PMF1-205ENST00000497069 QSER1Q2KHR3 1735 aa20.34■□□□□ 0.85
PMF1-205ENST00000497069 ANXA1P04083 346 aa20.34■□□□□ 0.85
PMF1-205ENST00000497069 CT47B1P0C2W7 299 aaPredicted RBP20.34■□□□□ 0.85
PMF1-205ENST00000497069 PDIA6Q15084 440 aa20.34■□□□□ 0.85
PMF1-205ENST00000497069 DZIP3Q86Y13 1208 aaKnown RBP20.34■□□□□ 0.85
PMF1-205ENST00000497069 SLC16A10Q8TF71 515 aa20.34■□□□□ 0.85
PMF1-205ENST00000497069 TUBGCP6Q96RT7 1819 aa20.33■□□□□ 0.85
PMF1-205ENST00000497069 PROSER3Q2NL68 480 aa20.33■□□□□ 0.85
PMF1-205ENST00000497069 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
PMF1-205ENST00000497069 KIF6Q6ZMV9 814 aa20.32■□□□□ 0.84
PMF1-205ENST00000497069 ZNF428Q96B54 188 aa20.32■□□□□ 0.84
PMF1-205ENST00000497069 PDGFDQ9GZP0 370 aaPredicted RBP20.32■□□□□ 0.84
PMF1-205ENST00000497069 NARFQ9UHQ1 456 aa20.32■□□□□ 0.84
PMF1-205ENST00000497069 TBC1D2BQ9UPU7 963 aa20.32■□□□□ 0.84
PMF1-205ENST00000497069 SLC4A2P04920 1241 aa20.31■□□□□ 0.84
PMF1-205ENST00000497069 AIMP1Q12904 312 aaKnown RBP20.31■□□□□ 0.84
PMF1-205ENST00000497069 SRP68Q9UHB9 627 aaKnown RBP20.31■□□□□ 0.84
PMF1-205ENST00000497069 USP42Q9H9J4 1324 aaKnown RBP20.3■□□□□ 0.84
PMF1-205ENST00000497069 USPL1Q5W0Q7 1092 aa20.3■□□□□ 0.84
PMF1-205ENST00000497069 COPS6Q7L5N1 327 aa20.3■□□□□ 0.84
PMF1-205ENST00000497069 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
PMF1-205ENST00000497069 ZBTB7AO95365 584 aa20.29■□□□□ 0.84
PMF1-205ENST00000497069 MTFR1LQ9H019 292 aa20.29■□□□□ 0.84
PMF1-205ENST00000497069 ZNF652Q9Y2D9 606 aa20.29■□□□□ 0.84
PMF1-205ENST00000497069 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
PMF1-205ENST00000497069 LRP10Q7Z4F1 713 aa20.28■□□□□ 0.84
PMF1-205ENST00000497069 NLGN1Q8N2Q7 840 aa20.28■□□□□ 0.84
PMF1-205ENST00000497069 PHAXQ9H814 394 aaKnown RBP20.28■□□□□ 0.84
PMF1-205ENST00000497069 CASZ1Q86V15 1759 aa20.27■□□□□ 0.84
PMF1-205ENST00000497069 CAMTA2O94983 1202 aa20.27■□□□□ 0.84
PMF1-205ENST00000497069 GYS1P13807 737 aa20.27■□□□□ 0.84
PMF1-205ENST00000497069 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
PMF1-205ENST00000497069 MSL1Q68DK7 614 aa20.27■□□□□ 0.84
PMF1-205ENST00000497069 C4AP0C0L4 1744 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms