RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 GRIN3BO60391 1043 aa10.49□□□□□ -0.73
SRRM1-220ENST00000496882 RFC4P35249 363 aa10.49□□□□□ -0.73
SRRM1-220ENST00000496882 MNX1P50219 401 aaPredicted RBP10.49□□□□□ -0.73
SRRM1-220ENST00000496882 NLGN2Q8NFZ4 835 aa10.49□□□□□ -0.73
SRRM1-220ENST00000496882 RYDENQ9NUL5 291 aaKnown RBP10.49□□□□□ -0.73
SRRM1-220ENST00000496882 COL24A1Q17RW2 1714 aa10.49□□□□□ -0.73
SRRM1-220ENST00000496882 UBR3Q6ZT12 1888 aa10.49□□□□□ -0.73
SRRM1-220ENST00000496882 RPS6KA4O75676 772 aa10.48□□□□□ -0.73
SRRM1-220ENST00000496882 TEFQ10587 303 aa10.48□□□□□ -0.73
SRRM1-220ENST00000496882 MTHFSDQ2M296 383 aaKnown RBP10.48□□□□□ -0.73
SRRM1-220ENST00000496882 SMIM5Q71RC9 77 aa10.48□□□□□ -0.73
SRRM1-220ENST00000496882 TTC5Q8N0Z6 440 aa10.48□□□□□ -0.73
SRRM1-220ENST00000496882 NLGN1Q8N2Q7 840 aa10.48□□□□□ -0.73
SRRM1-220ENST00000496882 NEFMP07197 916 aa10.47□□□□□ -0.73
SRRM1-220ENST00000496882 CRKLP46109 303 aaKnown RBP10.47□□□□□ -0.73
SRRM1-220ENST00000496882 AMIGO3Q86WK7 504 aa10.47□□□□□ -0.73
SRRM1-220ENST00000496882 SLC4A9Q96Q91 983 aa10.47□□□□□ -0.73
SRRM1-220ENST00000496882 LGR6Q9HBX8 967 aa10.47□□□□□ -0.73
SRRM1-220ENST00000496882 ZNF831Q5JPB2 1677 aa10.47□□□□□ -0.73
SRRM1-220ENST00000496882 GNAT3A8MTJ3 354 aa10.46□□□□□ -0.73
SRRM1-220ENST00000496882 MMP10P09238 476 aa10.46□□□□□ -0.73
SRRM1-220ENST00000496882 RASEFQ8IZ41 740 aa10.46□□□□□ -0.73
SRRM1-220ENST00000496882 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
SRRM1-220ENST00000496882 STK24Q9Y6E0 443 aa10.46□□□□□ -0.73
SRRM1-220ENST00000496882 PARP3Q9Y6F1 533 aa10.46□□□□□ -0.73
SRRM1-220ENST00000496882 COL3A1P02461 1466 aaPredicted RBP10.46□□□□□ -0.74
SRRM1-220ENST00000496882 SCN11AQ9UI33 1791 aa10.46□□□□□ -0.74
SRRM1-220ENST00000496882 U2AF1L5P0DN76 240 aaPredicted RBP10.45□□□□□ -0.74
SRRM1-220ENST00000496882 PPP2R1AP30153 589 aa10.45□□□□□ -0.74
SRRM1-220ENST00000496882 PRKAR2BP31323 418 aa10.45□□□□□ -0.74
SRRM1-220ENST00000496882 U2AF1Q01081 240 aaKnown RBP eCLIP10.45□□□□□ -0.74
SRRM1-220ENST00000496882 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
SRRM1-220ENST00000496882 CCDC87Q9NVE4 849 aa10.45□□□□□ -0.74
SRRM1-220ENST00000496882 MRC1P22897 1456 aa10.44□□□□□ -0.74
SRRM1-220ENST00000496882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
SRRM1-220ENST00000496882 ZPR1O75312 459 aa10.44□□□□□ -0.74
SRRM1-220ENST00000496882 SLC39A6Q13433 755 aa10.44□□□□□ -0.74
SRRM1-220ENST00000496882 NPM2Q86SE8 214 aaKnown RBP10.44□□□□□ -0.74
SRRM1-220ENST00000496882 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
SRRM1-220ENST00000496882 ZFP91Q96JP5 570 aaPredicted RBP10.44□□□□□ -0.74
SRRM1-220ENST00000496882 COL5A3P25940 1745 aaPredicted RBP10.44□□□□□ -0.74
SRRM1-220ENST00000496882 CHD4Q14839 1912 aa10.43□□□□□ -0.74
SRRM1-220ENST00000496882 STARD3NLO95772 234 aa10.43□□□□□ -0.74
SRRM1-220ENST00000496882 GYS1P13807 737 aa10.43□□□□□ -0.74
SRRM1-220ENST00000496882 DNAJC10Q8IXB1 793 aa10.43□□□□□ -0.74
SRRM1-220ENST00000496882 ZNF784Q8NCA9 323 aaPredicted RBP10.43□□□□□ -0.74
SRRM1-220ENST00000496882 FCHSD2O94868 740 aa10.42□□□□□ -0.74
SRRM1-220ENST00000496882 YBX3P16989 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
SRRM1-220ENST00000496882 TEX13AQ9BXU3 409 aaPredicted RBP10.42□□□□□ -0.74
SRRM1-220ENST00000496882 RSPH6AQ9H0K4 717 aa10.42□□□□□ -0.74
SRRM1-220ENST00000496882 CICQ96RK0 1608 aaPredicted RBP10.41□□□□□ -0.74
SRRM1-220ENST00000496882 USP42Q9H9J4 1324 aaKnown RBP10.41□□□□□ -0.74
SRRM1-220ENST00000496882 PYGBP11216 843 aa10.41□□□□□ -0.74
SRRM1-220ENST00000496882 CYP19A1P11511 503 aaPredicted RBP10.41□□□□□ -0.74
SRRM1-220ENST00000496882 TGFB2P61812 414 aa10.41□□□□□ -0.74
SRRM1-220ENST00000496882 FMNL2Q96PY5 1086 aa10.41□□□□□ -0.74
SRRM1-220ENST00000496882 PNNQ9H307 717 aaKnown RBP10.41□□□□□ -0.74
SRRM1-220ENST00000496882 TJP1Q07157 1748 aa10.41□□□□□ -0.74
SRRM1-220ENST00000496882 A0A087WZG4 1122 aa10.4□□□□□ -0.74
SRRM1-220ENST00000496882 BTBD11A6QL63 1104 aa10.4□□□□□ -0.74
SRRM1-220ENST00000496882 INTS5Q6P9B9 1019 aaKnown RBP10.4□□□□□ -0.74
SRRM1-220ENST00000496882 ZNF790Q6PG37 636 aa10.4□□□□□ -0.74
SRRM1-220ENST00000496882 IL17REQ8NFR9 667 aa10.4□□□□□ -0.74
SRRM1-220ENST00000496882 SRP68Q9UHB9 627 aaKnown RBP10.4□□□□□ -0.74
SRRM1-220ENST00000496882 WWC3Q9ULE0 1092 aa10.4□□□□□ -0.74
SRRM1-220ENST00000496882 COL15A1P39059 1388 aa10.39□□□□□ -0.75
SRRM1-220ENST00000496882 SOS1Q07889 1333 aaPredicted RBP10.39□□□□□ -0.75
SRRM1-220ENST00000496882 KCPQ6ZWJ8 1503 aa10.39□□□□□ -0.75
SRRM1-220ENST00000496882 ADAMTS7Q9UKP4 1686 aa10.39□□□□□ -0.75
SRRM1-220ENST00000496882 CANXP27824 592 aaKnown RBP10.39□□□□□ -0.75
SRRM1-220ENST00000496882 USPL1Q5W0Q7 1092 aa10.39□□□□□ -0.75
SRRM1-220ENST00000496882 POTEHQ6S545 545 aa10.39□□□□□ -0.75
SRRM1-220ENST00000496882 PHACTR3Q96KR7 559 aa10.39□□□□□ -0.75
SRRM1-220ENST00000496882 ZBTB1Q9Y2K1 713 aa10.39□□□□□ -0.75
SRRM1-220ENST00000496882 ZNF330Q9Y3S2 320 aaPredicted RBP10.39□□□□□ -0.75
SRRM1-220ENST00000496882 VIRMAQ69YN4 1812 aaKnown RBP10.39□□□□□ -0.75
SRRM1-220ENST00000496882 C10orf71Q711Q0 1435 aa10.39□□□□□ -0.75
SRRM1-220ENST00000496882 HEG1Q9ULI3 1381 aa10.39□□□□□ -0.75
SRRM1-220ENST00000496882 C4AP0C0L4 1744 aa10.38□□□□□ -0.75
SRRM1-220ENST00000496882 MAPK8IP3Q9UPT6 1336 aa10.38□□□□□ -0.75
SRRM1-220ENST00000496882 MYH14Q7Z406 1995 aaKnown RBP10.38□□□□□ -0.75
SRRM1-220ENST00000496882 HTATSF1O43719 755 aaKnown RBP10.38□□□□□ -0.75
SRRM1-220ENST00000496882 RALBP1Q15311 655 aa10.38□□□□□ -0.75
SRRM1-220ENST00000496882 ZNF496Q96IT1 587 aaPredicted RBP10.38□□□□□ -0.75
SRRM1-220ENST00000496882 NARFQ9UHQ1 456 aa10.38□□□□□ -0.75
SRRM1-220ENST00000496882 BCS1LQ9Y276 419 aa10.38□□□□□ -0.75
SRRM1-220ENST00000496882 CEMIPQ8WUJ3 1361 aa10.38□□□□□ -0.75
SRRM1-220ENST00000496882 A0A0G2JLW4 131 aa10.37□□□□□ -0.75
SRRM1-220ENST00000496882 GIGYF1O75420 1035 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-220ENST00000496882 PXDNLA1KZ92 1463 aa10.36□□□□□ -0.75
SRRM1-220ENST00000496882 NPHP1O15259 732 aa10.36□□□□□ -0.75
SRRM1-220ENST00000496882 DPEP1P16444 411 aa10.36□□□□□ -0.75
SRRM1-220ENST00000496882 MCM10Q7L590 875 aa10.36□□□□□ -0.75
SRRM1-220ENST00000496882 PIM2Q9P1W9 311 aa10.36□□□□□ -0.75
SRRM1-220ENST00000496882 UBR2Q8IWV8 1755 aa10.35□□□□□ -0.75
SRRM1-220ENST00000496882 POLRMTO00411 1230 aaKnown RBP10.35□□□□□ -0.75
SRRM1-220ENST00000496882 SNRPA1P09661 255 aaKnown RBP10.35□□□□□ -0.75
SRRM1-220ENST00000496882 IL6STP40189 918 aaPredicted RBP10.35□□□□□ -0.75
SRRM1-220ENST00000496882 DDR1Q08345 913 aa10.35□□□□□ -0.75
SRRM1-220ENST00000496882 DDX10Q13206 875 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms