RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ZBTB1Q9Y2K1 713 aa20.9■□□□□ 0.94
HDAC4-213ENST00000496347 N4BP2Q86UW6 1770 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-213ENST00000496347 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
HDAC4-213ENST00000496347 TEX13AQ9BXU3 409 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-213ENST00000496347 KDM3BQ7LBC6 1761 aa20.89■□□□□ 0.93
HDAC4-213ENST00000496347 MYBBP1AQ9BQG0 1328 aaKnown RBP20.88■□□□□ 0.93
HDAC4-213ENST00000496347 NRXN2Q9P2S2 1712 aa20.88■□□□□ 0.93
HDAC4-213ENST00000496347 BTBD11A6QL63 1104 aa20.88■□□□□ 0.93
HDAC4-213ENST00000496347 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
HDAC4-213ENST00000496347 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
HDAC4-213ENST00000496347 SRP68Q9UHB9 627 aaKnown RBP20.88■□□□□ 0.93
HDAC4-213ENST00000496347 PARP3Q9Y6F1 533 aa20.88■□□□□ 0.93
HDAC4-213ENST00000496347 BCORQ6W2J9 1755 aa20.87■□□□□ 0.93
HDAC4-213ENST00000496347 ZPR1O75312 459 aa20.87■□□□□ 0.93
HDAC4-213ENST00000496347 MCM10Q7L590 875 aa20.87■□□□□ 0.93
HDAC4-213ENST00000496347 MAPK8IP3Q9UPT6 1336 aa20.86■□□□□ 0.93
HDAC4-213ENST00000496347 AFDNP55196 1824 aaKnown RBP20.86■□□□□ 0.93
HDAC4-213ENST00000496347 FKBP8Q14318 412 aa20.86■□□□□ 0.93
HDAC4-213ENST00000496347 PLEKHF1Q96S99 279 aa20.86■□□□□ 0.93
HDAC4-213ENST00000496347 NARFQ9UHQ1 456 aa20.86■□□□□ 0.93
HDAC4-213ENST00000496347 ARFGEF1Q9Y6D6 1849 aa20.84■□□□□ 0.93
HDAC4-213ENST00000496347 TGFB2P61812 414 aa20.84■□□□□ 0.93
HDAC4-213ENST00000496347 A0A087WZG4 1122 aa20.83■□□□□ 0.93
HDAC4-213ENST00000496347 ZEB1P37275 1124 aaPredicted RBP20.83■□□□□ 0.93
HDAC4-213ENST00000496347 EIF5P55010 431 aaKnown RBP20.83■□□□□ 0.93
HDAC4-213ENST00000496347 DDR1Q08345 913 aa20.83■□□□□ 0.93
HDAC4-213ENST00000496347 NFE2L2Q16236 605 aa20.83■□□□□ 0.93
HDAC4-213ENST00000496347 USPL1Q5W0Q7 1092 aa20.83■□□□□ 0.93
HDAC4-213ENST00000496347 ZNF784Q8NCA9 323 aaPredicted RBP20.83■□□□□ 0.93
HDAC4-213ENST00000496347 DLEC1Q9Y238 1755 aa20.82■□□□□ 0.92
HDAC4-213ENST00000496347 CANXP27824 592 aaKnown RBP20.82■□□□□ 0.92
HDAC4-213ENST00000496347 POLRMTO00411 1230 aaKnown RBP20.81■□□□□ 0.92
HDAC4-213ENST00000496347 IL6STP40189 918 aaPredicted RBP20.81■□□□□ 0.92
HDAC4-213ENST00000496347 DCTN1Q14203 1278 aa20.81■□□□□ 0.92
HDAC4-213ENST00000496347 KCNQ3O43525 872 aa20.8■□□□□ 0.92
HDAC4-213ENST00000496347 SNRPA1P09661 255 aaKnown RBP20.79■□□□□ 0.92
HDAC4-213ENST00000496347 TM4SF1P30408 202 aa20.79■□□□□ 0.92
HDAC4-213ENST00000496347 NFIXQ14938 502 aa20.78■□□□□ 0.92
HDAC4-213ENST00000496347 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-213ENST00000496347 PNISRQ8TF01 805 aaKnown RBP20.78■□□□□ 0.92
HDAC4-213ENST00000496347 ADCY9O60503 1353 aa20.77■□□□□ 0.92
HDAC4-213ENST00000496347 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
HDAC4-213ENST00000496347 BCL2L12Q9HB09 334 aa20.77■□□□□ 0.92
HDAC4-213ENST00000496347 CARMIL3Q8ND23 1372 aa20.75■□□□□ 0.91
HDAC4-213ENST00000496347 DPEP1P16444 411 aa20.75■□□□□ 0.91
HDAC4-213ENST00000496347 ZNF330Q9Y3S2 320 aaPredicted RBP20.75■□□□□ 0.91
HDAC4-213ENST00000496347 A0A0G2JLW4 131 aa20.74■□□□□ 0.91
HDAC4-213ENST00000496347 A1BGP04217 495 aa20.74■□□□□ 0.91
HDAC4-213ENST00000496347 LMOD3Q0VAK6 560 aa20.74■□□□□ 0.91
HDAC4-213ENST00000496347 PRKRIP1Q9H875 184 aaPredicted RBP20.74■□□□□ 0.91
HDAC4-213ENST00000496347 WWC3Q9ULE0 1092 aa20.74■□□□□ 0.91
HDAC4-213ENST00000496347 ANKRD31Q8N7Z5 1873 aa20.73■□□□□ 0.91
HDAC4-213ENST00000496347 PRAMEF22A3QJZ6 481 aa20.72■□□□□ 0.91
HDAC4-213ENST00000496347 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
HDAC4-213ENST00000496347 BCS1LQ9Y276 419 aa20.72■□□□□ 0.91
HDAC4-213ENST00000496347 USP16Q9Y5T5 823 aa20.72■□□□□ 0.91
HDAC4-213ENST00000496347 ATP10DQ9P241 1426 aa20.71■□□□□ 0.91
HDAC4-213ENST00000496347 COL11A2P13942 1736 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-213ENST00000496347 RGL2O15211 777 aa20.71■□□□□ 0.91
HDAC4-213ENST00000496347 CAMTA2O94983 1202 aa20.71■□□□□ 0.91
HDAC4-213ENST00000496347 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
HDAC4-213ENST00000496347 SERPINB2P05120 415 aa20.7■□□□□ 0.9
HDAC4-213ENST00000496347 KCNA3P22001 575 aa20.7■□□□□ 0.9
HDAC4-213ENST00000496347 DZIP3Q86Y13 1208 aaKnown RBP20.7■□□□□ 0.9
HDAC4-213ENST00000496347 PIM2Q9P1W9 311 aa20.7■□□□□ 0.9
HDAC4-213ENST00000496347 TBC1D2BQ9UPU7 963 aa20.7■□□□□ 0.9
HDAC4-213ENST00000496347 TMPOP42166 694 aaKnown RBP20.69■□□□□ 0.9
HDAC4-213ENST00000496347 RIPK4P57078 832 aa20.69■□□□□ 0.9
HDAC4-213ENST00000496347 TBC1D9BQ66K14 1250 aa20.69■□□□□ 0.9
HDAC4-213ENST00000496347 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
HDAC4-213ENST00000496347 ZNF652Q9Y2D9 606 aa20.69■□□□□ 0.9
HDAC4-213ENST00000496347 GIGYF1O75420 1035 aaPredicted RBP20.68■□□□□ 0.9
HDAC4-213ENST00000496347 EIF4A1P60842 406 aaKnown RBP20.68■□□□□ 0.9
HDAC4-213ENST00000496347 DALRD3Q5D0E6 543 aaKnown RBP20.68■□□□□ 0.9
HDAC4-213ENST00000496347 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
HDAC4-213ENST00000496347 CLEC4GQ6UXB4 293 aa20.67■□□□□ 0.9
HDAC4-213ENST00000496347 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
HDAC4-213ENST00000496347 ARFGEF2Q9Y6D5 1785 aa20.67■□□□□ 0.9
HDAC4-213ENST00000496347 NBPF26B4DH59 902 aa20.66■□□□□ 0.9
HDAC4-213ENST00000496347 CHRNA5P30532 468 aa20.66■□□□□ 0.9
HDAC4-213ENST00000496347 PIP4K2AP48426 406 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-213ENST00000496347 NBPF10Q6P3W6 841 aaKnown RBP20.66■□□□□ 0.9
HDAC4-213ENST00000496347 BICDL1Q6ZP65 573 aa20.66■□□□□ 0.9
HDAC4-213ENST00000496347 NBPF15Q8N660 670 aa20.66■□□□□ 0.9
HDAC4-213ENST00000496347 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
HDAC4-213ENST00000496347 ERBB4Q15303 1308 aa20.65■□□□□ 0.9
HDAC4-213ENST00000496347 CCDC146Q8IYE0 955 aa20.65■□□□□ 0.9
HDAC4-213ENST00000496347 CNBD1Q8NA66 436 aa20.65■□□□□ 0.9
HDAC4-213ENST00000496347 SETDB2Q96T68 719 aa20.65■□□□□ 0.9
HDAC4-213ENST00000496347 PDZRN3Q9UPQ7 1066 aa20.65■□□□□ 0.9
HDAC4-213ENST00000496347 NUP98P52948 1817 aa20.64■□□□□ 0.9
HDAC4-213ENST00000496347 SBF1O95248 1867 aa20.63■□□□□ 0.89
HDAC4-213ENST00000496347 PRR5LQ6MZQ0 368 aa20.63■□□□□ 0.89
HDAC4-213ENST00000496347 BRIP1Q9BX63 1249 aa20.62■□□□□ 0.89
HDAC4-213ENST00000496347 ADAMTS8Q9UP79 889 aa20.62■□□□□ 0.89
HDAC4-213ENST00000496347 H0YIN7 160 aa20.61■□□□□ 0.89
HDAC4-213ENST00000496347 PDE6BP35913 854 aa20.61■□□□□ 0.89
HDAC4-213ENST00000496347 ST5P78524 1137 aa20.61■□□□□ 0.89
HDAC4-213ENST00000496347 ARHGAP27Q6ZUM4 889 aa20.61■□□□□ 0.89
HDAC4-213ENST00000496347 C2CD5Q86YS7 1000 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms