RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 TMPOP42166 694 aaKnown RBP29.2■■■□□ 2.26
PCOLCE-210ENST00000496269 SRP68Q9UHB9 627 aaKnown RBP29.2■■■□□ 2.26
PCOLCE-210ENST00000496269 COL15A1P39059 1388 aa29.2■■■□□ 2.26
PCOLCE-210ENST00000496269 SCN7AQ01118 1682 aa29.2■■■□□ 2.26
PCOLCE-210ENST00000496269 CCDC184Q52MB2 194 aa29.19■■■□□ 2.26
PCOLCE-210ENST00000496269 CCDC146Q8IYE0 955 aa29.19■■■□□ 2.26
PCOLCE-210ENST00000496269 WDR43Q15061 677 aaKnown RBP eCLIP29.18■■■□□ 2.26
PCOLCE-210ENST00000496269 PRAMEF22A3QJZ6 481 aa29.17■■■□□ 2.26
PCOLCE-210ENST00000496269 STARD3NLO95772 234 aa29.17■■■□□ 2.26
PCOLCE-210ENST00000496269 MMP10P09238 476 aa29.17■■■□□ 2.26
PCOLCE-210ENST00000496269 NLGN1Q8N2Q7 840 aa29.17■■■□□ 2.26
PCOLCE-210ENST00000496269 RUNDC1Q96C34 613 aa29.17■■■□□ 2.26
PCOLCE-210ENST00000496269 TEX13AQ9BXU3 409 aaPredicted RBP29.17■■■□□ 2.26
PCOLCE-210ENST00000496269 EIF5P55010 431 aaKnown RBP29.16■■■□□ 2.26
PCOLCE-210ENST00000496269 RIPK4P57078 832 aa29.16■■■□□ 2.26
PCOLCE-210ENST00000496269 MIS18AQ9NYP9 233 aa29.16■■■□□ 2.26
PCOLCE-210ENST00000496269 BCORQ6W2J9 1755 aa29.16■■■□□ 2.26
PCOLCE-210ENST00000496269 KLHL34Q8N239 644 aa29.15■■■□□ 2.26
PCOLCE-210ENST00000496269 CD2APQ9Y5K6 639 aa29.15■■■□□ 2.26
PCOLCE-210ENST00000496269 FKBP8Q14318 412 aa29.14■■■□□ 2.26
PCOLCE-210ENST00000496269 USP16Q9Y5T5 823 aa29.14■■■□□ 2.26
PCOLCE-210ENST00000496269 NRXN2Q9P2S2 1712 aa29.14■■■□□ 2.25
PCOLCE-210ENST00000496269 C10orf71Q711Q0 1435 aa29.13■■■□□ 2.25
PCOLCE-210ENST00000496269 A1BGP04217 495 aa29.12■■■□□ 2.25
PCOLCE-210ENST00000496269 CANXP27824 592 aaKnown RBP29.12■■■□□ 2.25
PCOLCE-210ENST00000496269 PNISRQ8TF01 805 aaKnown RBP29.12■■■□□ 2.25
PCOLCE-210ENST00000496269 BCL2L12Q9HB09 334 aa29.12■■■□□ 2.25
PCOLCE-210ENST00000496269 NARFQ9UHQ1 456 aa29.12■■■□□ 2.25
PCOLCE-210ENST00000496269 TRIM35Q9UPQ4 493 aa29.12■■■□□ 2.25
PCOLCE-210ENST00000496269 RRP7AQ9Y3A4 280 aaKnown RBP29.12■■■□□ 2.25
PCOLCE-210ENST00000496269 AFDNP55196 1824 aaKnown RBP29.12■■■□□ 2.25
PCOLCE-210ENST00000496269 SNRPA1P09661 255 aaKnown RBP29.11■■■□□ 2.25
PCOLCE-210ENST00000496269 USPL1Q5W0Q7 1092 aa29.11■■■□□ 2.25
PCOLCE-210ENST00000496269 UTRNP46939 3433 aa29.11■■■□□ 2.25
PCOLCE-210ENST00000496269 DDR1Q08345 913 aa29.1■■■□□ 2.25
PCOLCE-210ENST00000496269 IL6STP40189 918 aaPredicted RBP29.09■■■□□ 2.25
PCOLCE-210ENST00000496269 EIF4A1P60842 406 aaKnown RBP29.09■■■□□ 2.25
PCOLCE-210ENST00000496269 N4BP2Q86UW6 1770 aaPredicted RBP29.08■■■□□ 2.25
PCOLCE-210ENST00000496269 TM4SF1P30408 202 aa29.08■■■□□ 2.25
PCOLCE-210ENST00000496269 GOLGB1Q14789 3259 aaKnown RBP29.08■■■□□ 2.25
PCOLCE-210ENST00000496269 BRCA1P38398 1863 aaKnown RBP29.08■■■□□ 2.25
PCOLCE-210ENST00000496269 LMOD3Q0VAK6 560 aa29.07■■■□□ 2.24
PCOLCE-210ENST00000496269 PXDNLA1KZ92 1463 aa29.06■■■□□ 2.24
PCOLCE-210ENST00000496269 CHD4Q14839 1912 aa29.05■■■□□ 2.24
PCOLCE-210ENST00000496269 NBPF26B4DH59 902 aa29.05■■■□□ 2.24
PCOLCE-210ENST00000496269 ZPR1O75312 459 aa29.05■■■□□ 2.24
PCOLCE-210ENST00000496269 GIGYF1O75420 1035 aaPredicted RBP29.05■■■□□ 2.24
PCOLCE-210ENST00000496269 NBPF10Q6P3W6 841 aaKnown RBP29.05■■■□□ 2.24
PCOLCE-210ENST00000496269 NBPF15Q8N660 670 aa29.05■■■□□ 2.24
PCOLCE-210ENST00000496269 POLRMTO00411 1230 aaKnown RBP29.04■■■□□ 2.24
PCOLCE-210ENST00000496269 PIP4K2AP48426 406 aaPredicted RBP29.04■■■□□ 2.24
PCOLCE-210ENST00000496269 NEUROD2Q15784 382 aa29.04■■■□□ 2.24
PCOLCE-210ENST00000496269 A0A087WZG4 1122 aa29.03■■■□□ 2.24
PCOLCE-210ENST00000496269 ANP32CO43423 234 aa29.03■■■□□ 2.24
PCOLCE-210ENST00000496269 BABAM1Q9NWV8 329 aa29.03■■■□□ 2.24
PCOLCE-210ENST00000496269 PARP3Q9Y6F1 533 aa29.02■■■□□ 2.24
PCOLCE-210ENST00000496269 DCAF8L1A6NGE4 600 aa29.01■■■□□ 2.23
PCOLCE-210ENST00000496269 YBX3P16989 372 aaKnown RBP eCLIP29.01■■■□□ 2.23
PCOLCE-210ENST00000496269 NFIXQ14938 502 aa29.01■■■□□ 2.23
PCOLCE-210ENST00000496269 CAMTA2O94983 1202 aa29■■■□□ 2.23
PCOLCE-210ENST00000496269 TSPYL4Q9UJ04 414 aa29■■■□□ 2.23
PCOLCE-210ENST00000496269 APAF1O14727 1248 aa28.99■■■□□ 2.23
PCOLCE-210ENST00000496269 TBC1D2BQ9UPU7 963 aa28.99■■■□□ 2.23
PCOLCE-210ENST00000496269 CHL1O00533 1208 aa28.98■■■□□ 2.23
PCOLCE-210ENST00000496269 ANKRD31Q8N7Z5 1873 aa28.97■■■□□ 2.23
PCOLCE-210ENST00000496269 DLEC1Q9Y238 1755 aa28.96■■■□□ 2.23
PCOLCE-210ENST00000496269 GPR162Q16538 588 aa28.96■■■□□ 2.23
PCOLCE-210ENST00000496269 ZNF330Q9Y3S2 320 aaPredicted RBP28.96■■■□□ 2.23
PCOLCE-210ENST00000496269 DZIP3Q86Y13 1208 aaKnown RBP28.95■■■□□ 2.22
PCOLCE-210ENST00000496269 MRS2Q9HD23 443 aa28.95■■■□□ 2.22
PCOLCE-210ENST00000496269 TGFB2P61812 414 aa28.94■■■□□ 2.22
PCOLCE-210ENST00000496269 TBC1D9BQ66K14 1250 aa28.94■■■□□ 2.22
PCOLCE-210ENST00000496269 ZNF853P0CG23 659 aa28.92■■■□□ 2.22
PCOLCE-210ENST00000496269 NUP98P52948 1817 aa28.92■■■□□ 2.22
PCOLCE-210ENST00000496269 CARMIL3Q8ND23 1372 aa28.91■■■□□ 2.22
PCOLCE-210ENST00000496269 KCNA3P22001 575 aa28.91■■■□□ 2.22
PCOLCE-210ENST00000496269 LRP10Q7Z4F1 713 aa28.91■■■□□ 2.22
PCOLCE-210ENST00000496269 PELP1Q8IZL8 1130 aaKnown RBP28.91■■■□□ 2.22
PCOLCE-210ENST00000496269 ARFGEF1Q9Y6D6 1849 aa28.91■■■□□ 2.22
PCOLCE-210ENST00000496269 SERPINB2P05120 415 aa28.9■■■□□ 2.22
PCOLCE-210ENST00000496269 ERBB4Q15303 1308 aa28.9■■■□□ 2.22
PCOLCE-210ENST00000496269 A0A0G2JLW4 131 aa28.89■■■□□ 2.22
PCOLCE-210ENST00000496269 RGL2O15211 777 aa28.89■■■□□ 2.22
PCOLCE-210ENST00000496269 DPEP1P16444 411 aa28.89■■■□□ 2.22
PCOLCE-210ENST00000496269 KRT24Q2M2I5 525 aa28.89■■■□□ 2.22
PCOLCE-210ENST00000496269 CFAP44Q96MT7 982 aa28.89■■■□□ 2.22
PCOLCE-210ENST00000496269 COL11A2P13942 1736 aaPredicted RBP28.89■■■□□ 2.21
PCOLCE-210ENST00000496269 PDIA6Q15084 440 aa28.88■■■□□ 2.21
PCOLCE-210ENST00000496269 YY1P25490 414 aa28.87■■■□□ 2.21
PCOLCE-210ENST00000496269 BICDL1Q6ZP65 573 aa28.87■■■□□ 2.21
PCOLCE-210ENST00000496269 CLEC4GQ6UXB4 293 aa28.86■■■□□ 2.21
PCOLCE-210ENST00000496269 WWC3Q9ULE0 1092 aa28.86■■■□□ 2.21
PCOLCE-210ENST00000496269 GRIN3BO60391 1043 aa28.85■■■□□ 2.21
PCOLCE-210ENST00000496269 NPM2Q86SE8 214 aaKnown RBP28.85■■■□□ 2.21
PCOLCE-210ENST00000496269 MBIPQ9NS73 344 aa28.85■■■□□ 2.21
PCOLCE-210ENST00000496269 LAS1LQ9Y4W2 734 aaKnown RBP28.85■■■□□ 2.21
PCOLCE-210ENST00000496269 IFT57Q9NWB7 429 aa28.84■■■□□ 2.21
PCOLCE-210ENST00000496269 HLFQ16534 295 aa28.83■■■□□ 2.21
PCOLCE-210ENST00000496269 CCDC27Q2M243 656 aa28.83■■■□□ 2.21
PCOLCE-210ENST00000496269 PROSER3Q2NL68 480 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms