RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 BEND3Q5T5X7 828 aa13.68□□□□□ -0.22
TBRG4-217ENST00000495973 TTC5Q8N0Z6 440 aa13.68□□□□□ -0.22
TBRG4-217ENST00000495973 KLHDC4Q8TBB5 520 aa13.68□□□□□ -0.22
TBRG4-217ENST00000495973 ZNF496Q96IT1 587 aaPredicted RBP13.68□□□□□ -0.22
TBRG4-217ENST00000495973 NPHP3Q7Z494 1330 aa13.68□□□□□ -0.22
TBRG4-217ENST00000495973 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
TBRG4-217ENST00000495973 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
TBRG4-217ENST00000495973 PTCD1O75127 700 aaKnown RBP13.67□□□□□ -0.22
TBRG4-217ENST00000495973 ZNF790Q6PG37 636 aa13.67□□□□□ -0.22
TBRG4-217ENST00000495973 VSIG10Q8N0Z9 540 aa13.67□□□□□ -0.22
TBRG4-217ENST00000495973 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
TBRG4-217ENST00000495973 SPG7Q9UQ90 795 aa13.67□□□□□ -0.22
TBRG4-217ENST00000495973 USP16Q9Y5T5 823 aa13.67□□□□□ -0.22
TBRG4-217ENST00000495973 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 ERC2O15083 957 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 RHPN1Q8TCX5 695 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 XAGE3Q8WTP9 111 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 ARID3AQ99856 593 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
TBRG4-217ENST00000495973 ADCY9O60503 1353 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 PHKG2P15735 406 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 CABP4P57796 275 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 MYD88Q99836 296 aa13.66□□□□□ -0.22
TBRG4-217ENST00000495973 DTNBO60941 627 aa13.65□□□□□ -0.22
TBRG4-217ENST00000495973 COPS6Q7L5N1 327 aa13.65□□□□□ -0.22
TBRG4-217ENST00000495973 CYP27B1O15528 508 aa13.65□□□□□ -0.22
TBRG4-217ENST00000495973 MCM4P33991 863 aa13.65□□□□□ -0.22
TBRG4-217ENST00000495973 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
TBRG4-217ENST00000495973 REC8O95072 547 aa13.65□□□□□ -0.22
TBRG4-217ENST00000495973 IFNL2Q8IZJ0 200 aa13.65□□□□□ -0.22
TBRG4-217ENST00000495973 SLC52A2Q9HAB3 445 aa13.65□□□□□ -0.22
TBRG4-217ENST00000495973 IBTKQ9P2D0 1353 aaPredicted RBP13.65□□□□□ -0.23
TBRG4-217ENST00000495973 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
TBRG4-217ENST00000495973 LARP6Q9BRS8 491 aaKnown RBP13.64□□□□□ -0.23
TBRG4-217ENST00000495973 UPF3BQ9BZI7 483 aaKnown RBP13.64□□□□□ -0.23
TBRG4-217ENST00000495973 CHMP3Q9Y3E7 222 aa13.64□□□□□ -0.23
TBRG4-217ENST00000495973 MST1RQ04912 1400 aa13.64□□□□□ -0.23
TBRG4-217ENST00000495973 KAT6BQ8WYB5 2073 aa13.64□□□□□ -0.23
TBRG4-217ENST00000495973 NEK4P51957 841 aa13.64□□□□□ -0.23
TBRG4-217ENST00000495973 FOXD4L6Q3SYB3 417 aaPredicted RBP13.64□□□□□ -0.23
TBRG4-217ENST00000495973 KSR2Q6VAB6 950 aa13.64□□□□□ -0.23
TBRG4-217ENST00000495973 FOXD4L3Q6VB84 417 aaPredicted RBP13.64□□□□□ -0.23
TBRG4-217ENST00000495973 SSFA2P28290 1259 aa13.64□□□□□ -0.23
TBRG4-217ENST00000495973 EVA1CP58658 441 aa13.64□□□□□ -0.23
TBRG4-217ENST00000495973 TNPO1Q92973 898 aaKnown RBP13.64□□□□□ -0.23
TBRG4-217ENST00000495973 RGPD5Q99666 1765 aa13.63□□□□□ -0.23
TBRG4-217ENST00000495973 SSH3Q8TE77 659 aa13.63□□□□□ -0.23
TBRG4-217ENST00000495973 IL25Q9H293 177 aa13.63□□□□□ -0.23
TBRG4-217ENST00000495973 SUCLG2Q96I99 432 aa13.63□□□□□ -0.23
TBRG4-217ENST00000495973 CCDC8Q9H0W5 538 aaPredicted RBP13.63□□□□□ -0.23
TBRG4-217ENST00000495973 PALD1Q9ULE6 856 aa13.63□□□□□ -0.23
TBRG4-217ENST00000495973 DDX58O95786 925 aaKnown RBP13.62□□□□□ -0.23
TBRG4-217ENST00000495973 CWC27Q6UX04 472 aaKnown RBP13.62□□□□□ -0.23
TBRG4-217ENST00000495973 BICC1Q9H694 974 aaKnown RBP13.62□□□□□ -0.23
TBRG4-217ENST00000495973 ZGPATQ8N5A5 531 aaKnown RBP13.62□□□□□ -0.23
TBRG4-217ENST00000495973 CHAMP1Q96JM3 812 aa13.62□□□□□ -0.23
TBRG4-217ENST00000495973 MEGF6O75095 1541 aa13.62□□□□□ -0.23
TBRG4-217ENST00000495973 FAM208AQ9UK61 1670 aaKnown RBP13.62□□□□□ -0.23
TBRG4-217ENST00000495973 RABEP1Q15276 862 aa13.62□□□□□ -0.23
TBRG4-217ENST00000495973 SNX21Q969T3 373 aa13.62□□□□□ -0.23
TBRG4-217ENST00000495973 ESYT1Q9BSJ8 1104 aa13.62□□□□□ -0.23
TBRG4-217ENST00000495973 HYPKQ9NX55 129 aa13.62□□□□□ -0.23
TBRG4-217ENST00000495973 NEXNQ0ZGT2 675 aa13.61□□□□□ -0.23
TBRG4-217ENST00000495973 AACSQ86V21 672 aa13.61□□□□□ -0.23
TBRG4-217ENST00000495973 CHMLP26374 656 aa13.61□□□□□ -0.23
TBRG4-217ENST00000495973 PKP1Q13835 747 aa13.61□□□□□ -0.23
TBRG4-217ENST00000495973 KIF1BPQ96EK5 621 aa13.61□□□□□ -0.23
TBRG4-217ENST00000495973 DDX21Q9NR30 783 aaKnown RBP eCLIP13.61□□□□□ -0.23
TBRG4-217ENST00000495973 SLAIN2Q9P270 581 aa13.61□□□□□ -0.23
TBRG4-217ENST00000495973 TRAK2O60296 914 aa13.61□□□□□ -0.23
TBRG4-217ENST00000495973 HOXB7P09629 217 aa13.61□□□□□ -0.23
TBRG4-217ENST00000495973 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
TBRG4-217ENST00000495973 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
TBRG4-217ENST00000495973 SPATA31A3Q5VYP0 1347 aa13.61□□□□□ -0.23
TBRG4-217ENST00000495973 GRM8O00222 908 aa13.6□□□□□ -0.23
TBRG4-217ENST00000495973 ST18O60284 1047 aa13.6□□□□□ -0.23
TBRG4-217ENST00000495973 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.6□□□□□ -0.23
TBRG4-217ENST00000495973 LRRC37A3O60309 1634 aa13.6□□□□□ -0.23
TBRG4-217ENST00000495973 MED1Q15648 1581 aaPredicted RBP13.6□□□□□ -0.23
TBRG4-217ENST00000495973 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
TBRG4-217ENST00000495973 PKNOX2Q96KN3 472 aa13.6□□□□□ -0.23
TBRG4-217ENST00000495973 NAP1L5Q96NT1 182 aaPredicted RBP13.6□□□□□ -0.23
TBRG4-217ENST00000495973 UBE3BQ7Z3V4 1068 aa13.6□□□□□ -0.23
TBRG4-217ENST00000495973 PDIA6Q15084 440 aa13.59□□□□□ -0.23
TBRG4-217ENST00000495973 NDUFB9Q9Y6M9 179 aa13.59□□□□□ -0.23
TBRG4-217ENST00000495973 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
TBRG4-217ENST00000495973 IGKV5-2P06315 115 aa13.59□□□□□ -0.23
TBRG4-217ENST00000495973 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.234e-8■■■■■ 29.5
TBRG4-217ENST00000495973 LARP1Q6PKG0 1096 aaKnown RBP13.59□□□□□ -0.23
TBRG4-217ENST00000495973 CCDC85AQ96PX6 553 aaPredicted RBP13.58□□□□□ -0.23
TBRG4-217ENST00000495973 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.23
TBRG4-217ENST00000495973 ZBTB3Q9H5J0 574 aa13.58□□□□□ -0.23
TBRG4-217ENST00000495973 POLA2Q14181 598 aa13.58□□□□□ -0.24
TBRG4-217ENST00000495973 EPHA10Q5JZY3 1008 aa13.58□□□□□ -0.24
TBRG4-217ENST00000495973 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
TBRG4-217ENST00000495973 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
TBRG4-217ENST00000495973 OSBPL3Q9H4L5 887 aa13.58□□□□□ -0.24
TBRG4-217ENST00000495973 A1BGP04217 495 aa13.58□□□□□ -0.24
TBRG4-217ENST00000495973 SNRPA1P09661 255 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms