RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SRGAP3O43295 1099 aa15.81■□□□□ 0.12
PTPN7-217ENST00000495688 DTNBO60941 627 aa15.81■□□□□ 0.12
PTPN7-217ENST00000495688 LRSAM1Q6UWE0 723 aa15.81■□□□□ 0.12
PTPN7-217ENST00000495688 PI4K2BQ8TCG2 481 aa15.81■□□□□ 0.12
PTPN7-217ENST00000495688 RHPN1Q8TCX5 695 aa15.81■□□□□ 0.12
PTPN7-217ENST00000495688 CHPF2Q9P2E5 772 aa15.81■□□□□ 0.12
PTPN7-217ENST00000495688 MARF1Q9Y4F3 1742 aaKnown RBP15.8■□□□□ 0.12
PTPN7-217ENST00000495688 ZBTB7CA1YPR0 619 aa15.8■□□□□ 0.12
PTPN7-217ENST00000495688 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
PTPN7-217ENST00000495688 CACNA1FO60840 1977 aa15.79■□□□□ 0.12
PTPN7-217ENST00000495688 PI4KAP2A4QPH2 592 aa15.79■□□□□ 0.12
PTPN7-217ENST00000495688 GADD45BO75293 160 aaPredicted RBP15.79■□□□□ 0.12
PTPN7-217ENST00000495688 MSNP26038 577 aaKnown RBP15.79■□□□□ 0.12
PTPN7-217ENST00000495688 TPRNQ4KMQ1 711 aa15.79■□□□□ 0.12
PTPN7-217ENST00000495688 PI4KAP1Q8N8J0 262 aa15.79■□□□□ 0.12
PTPN7-217ENST00000495688 PDLIM2Q96JY6 352 aa15.79■□□□□ 0.12
PTPN7-217ENST00000495688 HSPA4P34932 840 aa15.79■□□□□ 0.12
PTPN7-217ENST00000495688 NBPF6Q5VWK0 638 aa15.79■□□□□ 0.12
PTPN7-217ENST00000495688 INTS4Q96HW7 963 aaKnown RBP15.79■□□□□ 0.12
PTPN7-217ENST00000495688 NBPF4Q96M43 638 aa15.79■□□□□ 0.12
PTPN7-217ENST00000495688 POLA2Q14181 598 aa15.78■□□□□ 0.12
PTPN7-217ENST00000495688 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.78■□□□□ 0.12
PTPN7-217ENST00000495688 TCHHQ07283 1943 aa15.78■□□□□ 0.12
PTPN7-217ENST00000495688 RASEFQ8IZ41 740 aa15.78■□□□□ 0.12
PTPN7-217ENST00000495688 EIF4A1P60842 406 aaKnown RBP15.77■□□□□ 0.12
PTPN7-217ENST00000495688 SPG7Q9UQ90 795 aa15.77■□□□□ 0.12
PTPN7-217ENST00000495688 PXDNLA1KZ92 1463 aa15.77■□□□□ 0.11
PTPN7-217ENST00000495688 CPA1P15085 419 aa15.77■□□□□ 0.11
PTPN7-217ENST00000495688 CWC27Q6UX04 472 aaKnown RBP15.77■□□□□ 0.11
PTPN7-217ENST00000495688 KIAA1211Q6ZU35 1233 aa15.77■□□□□ 0.11
PTPN7-217ENST00000495688 SGSM2O43147 1006 aa15.76■□□□□ 0.11
PTPN7-217ENST00000495688 MBD3O95983 291 aa15.76■□□□□ 0.11
PTPN7-217ENST00000495688 BEND3Q5T5X7 828 aa15.76■□□□□ 0.11
PTPN7-217ENST00000495688 UBE2Q2Q8WVN8 375 aa15.76■□□□□ 0.11
PTPN7-217ENST00000495688 SNX14Q9Y5W7 946 aa15.76■□□□□ 0.11
PTPN7-217ENST00000495688 ARHGAP23Q9P227 1491 aa15.76■□□□□ 0.11
PTPN7-217ENST00000495688 SLIT1O75093 1534 aa15.76■□□□□ 0.11
PTPN7-217ENST00000495688 AOX1Q06278 1338 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 RAB11FIP3O75154 756 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 DNAAF4Q8WXU2 420 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 LRRC59Q96AG4 307 aaKnown RBP15.75■□□□□ 0.11
PTPN7-217ENST00000495688 KIF1BPQ96EK5 621 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 CEMIPQ8WUJ3 1361 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 RAD50Q92878 1312 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 N4BP2Q86UW6 1770 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-217ENST00000495688 MPRIPQ6WCQ1 1025 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 USP48Q86UV5 1035 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 IL17RAQ96F46 866 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
PTPN7-217ENST00000495688 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
PTPN7-217ENST00000495688 LSG1Q9H089 658 aaKnown RBP15.74■□□□□ 0.11
PTPN7-217ENST00000495688 NOL7Q9UMY1 257 aaKnown RBP15.74■□□□□ 0.11
PTPN7-217ENST00000495688 AK2P54819 239 aa15.74■□□□□ 0.11
PTPN7-217ENST00000495688 RPAP1Q9BWH6 1393 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-217ENST00000495688 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-217ENST00000495688 OFD1O75665 1012 aa15.73■□□□□ 0.11
PTPN7-217ENST00000495688 HSP90AA2PQ14568 343 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-217ENST00000495688 ADCY9O60503 1353 aa15.73■□□□□ 0.11
PTPN7-217ENST00000495688 OS9Q13438 667 aaPredicted RBP15.72■□□□□ 0.11
PTPN7-217ENST00000495688 RUFY3Q7L099 469 aa15.72■□□□□ 0.11
PTPN7-217ENST00000495688 CNTROBQ8N137 903 aa15.72■□□□□ 0.11
PTPN7-217ENST00000495688 TTC14Q96N46 770 aa15.72■□□□□ 0.11
PTPN7-217ENST00000495688 PA2G4Q9UQ80 394 aaKnown RBP15.72■□□□□ 0.11
PTPN7-217ENST00000495688 WDR33Q9C0J8 1336 aaKnown RBP15.72■□□□□ 0.11
PTPN7-217ENST00000495688 LARGE1O95461 756 aa15.72■□□□□ 0.11
PTPN7-217ENST00000495688 PROSER3Q2NL68 480 aa15.72■□□□□ 0.11
PTPN7-217ENST00000495688 ANKARQ7Z5J8 1434 aa15.72■□□□□ 0.11
PTPN7-217ENST00000495688 IP6K1Q92551 441 aa15.72■□□□□ 0.11
PTPN7-217ENST00000495688 LTN1O94822 1766 aa15.72■□□□□ 0.11
PTPN7-217ENST00000495688 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.11
PTPN7-217ENST00000495688 BTBD11A6QL63 1104 aa15.71■□□□□ 0.11
PTPN7-217ENST00000495688 DDX54Q8TDD1 881 aaKnown RBP15.71■□□□□ 0.11
PTPN7-217ENST00000495688 PHF8Q9UPP1 1060 aa15.71■□□□□ 0.11
PTPN7-217ENST00000495688 CNPY2Q9Y2B0 182 aa15.71■□□□□ 0.11
PTPN7-217ENST00000495688 TEFQ10587 303 aa15.71■□□□□ 0.11
PTPN7-217ENST00000495688 HS1BP3Q53T59 392 aa15.71■□□□□ 0.11
PTPN7-217ENST00000495688 MPNDQ8N594 471 aa15.71■□□□□ 0.11
PTPN7-217ENST00000495688 PTH1RQ03431 593 aa15.71■□□□□ 0.1
PTPN7-217ENST00000495688 ZNF530Q6P9A1 599 aaPredicted RBP15.71■□□□□ 0.1
PTPN7-217ENST00000495688 TSPY26PQ9H489 355 aa15.71■□□□□ 0.1
PTPN7-217ENST00000495688 CASTP20810 708 aaKnown RBP15.7■□□□□ 0.1
PTPN7-217ENST00000495688 CWF19L2Q2TBE0 894 aaKnown RBP15.7■□□□□ 0.1
PTPN7-217ENST00000495688 ZKSCAN5Q9Y2L8 839 aa15.7■□□□□ 0.1
PTPN7-217ENST00000495688 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.7■□□□□ 0.1
PTPN7-217ENST00000495688 RGPD2P0DJD1 1756 aa15.7■□□□□ 0.1
PTPN7-217ENST00000495688 SYT1P21579 422 aa15.7■□□□□ 0.1
PTPN7-217ENST00000495688 ADCK5Q3MIX3 580 aa15.7■□□□□ 0.1
PTPN7-217ENST00000495688 MAP3K2Q9Y2U5 619 aa15.7■□□□□ 0.1
PTPN7-217ENST00000495688 R3HCC1Q9Y3T6 440 aaKnown RBP15.7■□□□□ 0.1
PTPN7-217ENST00000495688 COL9A3Q14050 684 aaPredicted RBP15.69■□□□□ 0.1
PTPN7-217ENST00000495688 EPB41L2O43491 1005 aaKnown RBP15.68■□□□□ 0.1
PTPN7-217ENST00000495688 ZNF500O60304 480 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-217ENST00000495688 DIAPH3Q9NSV4 1193 aa15.68■□□□□ 0.1
PTPN7-217ENST00000495688 C9orf78Q9NZ63 289 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-217ENST00000495688 LIMCH1Q9UPQ0 1083 aa15.68■□□□□ 0.1
PTPN7-217ENST00000495688 TPM2P07951 284 aa15.68■□□□□ 0.1
PTPN7-217ENST00000495688 ZSCAN22P10073 491 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-217ENST00000495688 MED1Q15648 1581 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-217ENST00000495688 STX6O43752 255 aa15.67■□□□□ 0.1
PTPN7-217ENST00000495688 RRP9O43818 475 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms