RNA–Protein interactions for RNA: ENST00000495188.2

RNF146-208, Transcript of ring finger protein 146, human

TSL 2

Gene RNF146, Length 593 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF146-208	ENST00000495188	NBPF1	Q3BBV0	1214 aa		11.15	□□□□□ -0.62
RNF146-208	ENST00000495188	SCG3	Q8WXD2	468 aa	Known RBP	11.15	□□□□□ -0.62
RNF146-208	ENST00000495188	SERTM1	A2A2V5	107 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	IGFBP4	P22692	258 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	ITGA6	P23229	1130 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	NOS2	P35228	1153 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	VEGFB	P49765	207 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	FAM69C	Q0P6D2	419 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	SLC16A10	Q8TF71	515 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	ZDHHC1	Q8WTX9	485 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	L3MBTL2	Q969R5	705 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	AIDA	Q96BJ3	306 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	ZNF775	Q96BV0	537 aa	Predicted RBP	11.14	□□□□□ -0.63
RNF146-208	ENST00000495188	ZNF232	Q9UNY5	417 aa		11.14	□□□□□ -0.63
RNF146-208	ENST00000495188		H3BM21	787 aa		11.13	□□□□□ -0.63
RNF146-208	ENST00000495188	C21orf2	O43822	256 aa		11.13	□□□□□ -0.63
RNF146-208	ENST00000495188	F11	P03951	625 aa		11.13	□□□□□ -0.63
RNF146-208	ENST00000495188	PARP3	Q9Y6F1	533 aa		11.13	□□□□□ -0.63
RNF146-208	ENST00000495188	MSX1	P28360	303 aa		11.12	□□□□□ -0.63
RNF146-208	ENST00000495188	RIPOR1	Q6ZS17	1223 aa		11.12	□□□□□ -0.63
RNF146-208	ENST00000495188	STAG2	Q8N3U4	1231 aa		11.12	□□□□□ -0.63
RNF146-208	ENST00000495188	C1orf216	Q8TAB5	229 aa		11.12	□□□□□ -0.63
RNF146-208	ENST00000495188	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.12	□□□□□ -0.63
RNF146-208	ENST00000495188	GPAM	Q9HCL2	828 aa		11.12	□□□□□ -0.63
RNF146-208	ENST00000495188	ZDHHC3	Q9NYG2	299 aa		11.12	□□□□□ -0.63
RNF146-208	ENST00000495188	EML1	O00423	815 aa		11.11	□□□□□ -0.63
RNF146-208	ENST00000495188	TAT	P17735	454 aa	Predicted RBP	11.11	□□□□□ -0.63
RNF146-208	ENST00000495188	WEE1	P30291	646 aa		11.11	□□□□□ -0.63
RNF146-208	ENST00000495188		H7C1W4	665 aa		11.1	□□□□□ -0.63
RNF146-208	ENST00000495188	FOXO3	O43524	673 aa		11.1	□□□□□ -0.63
RNF146-208	ENST00000495188	HIRA	P54198	1017 aa	Predicted RBP	11.1	□□□□□ -0.63
RNF146-208	ENST00000495188	POTEA	Q6S8J7	498 aa		11.1	□□□□□ -0.63
RNF146-208	ENST00000495188	PGBD3	Q8N328	593 aa		11.1	□□□□□ -0.63
RNF146-208	ENST00000495188	CLP1	Q92989	425 aa	Known RBP	11.1	□□□□□ -0.63
RNF146-208	ENST00000495188	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.1	□□□□□ -0.63
RNF146-208	ENST00000495188	PRMT3	O60678	531 aa		11.09	□□□□□ -0.63
RNF146-208	ENST00000495188	ATP4A	P20648	1035 aa		11.09	□□□□□ -0.63
RNF146-208	ENST00000495188	SH3PXD2A	Q5TCZ1	1133 aa		11.09	□□□□□ -0.63
RNF146-208	ENST00000495188	TRIM22	Q8IYM9	498 aa		11.09	□□□□□ -0.63
RNF146-208	ENST00000495188	GMCL1	Q96IK5	515 aa		11.09	□□□□□ -0.63
RNF146-208	ENST00000495188	CDC14C	A4D256	554 aa		11.08	□□□□□ -0.64
RNF146-208	ENST00000495188	TMEM88B	A6NKF7	163 aa		11.08	□□□□□ -0.64
RNF146-208	ENST00000495188	TXLNA	P40222	546 aa		11.08	□□□□□ -0.64
RNF146-208	ENST00000495188	NFX1	Q12986	1120 aa	Known RBP	11.08	□□□□□ -0.64
RNF146-208	ENST00000495188	NANOS1	Q8WY41	292 aa	Known RBP	11.08	□□□□□ -0.64
RNF146-208	ENST00000495188	PRIMPOL	Q96LW4	560 aa		11.08	□□□□□ -0.64
RNF146-208	ENST00000495188	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.08	□□□□□ -0.64
RNF146-208	ENST00000495188	UST	Q9Y2C2	406 aa		11.08	□□□□□ -0.64
RNF146-208	ENST00000495188	IRF7	Q92985	503 aa		11.07	□□□□□ -0.64
RNF146-208	ENST00000495188	NUCKS1	Q9H1E3	243 aa	Known RBP	11.07	□□□□□ -0.64
RNF146-208	ENST00000495188	CRISPLD1	Q9H336	500 aa		11.07	□□□□□ -0.64
RNF146-208	ENST00000495188	RUBCNL	Q9H714	662 aa		11.07	□□□□□ -0.64
RNF146-208	ENST00000495188	WFS1	O76024	890 aa		11.06	□□□□□ -0.64
RNF146-208	ENST00000495188	LBR	Q14739	615 aa	Known RBP	11.06	□□□□□ -0.64
RNF146-208	ENST00000495188	OCLN	Q16625	522 aa		11.06	□□□□□ -0.64
RNF146-208	ENST00000495188	SV2A	Q7L0J3	742 aa		11.06	□□□□□ -0.64
RNF146-208	ENST00000495188	VTI1A	Q96AJ9	217 aa		11.06	□□□□□ -0.64
RNF146-208	ENST00000495188	ZNF837	Q96EG3	531 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF146-208	ENST00000495188	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF146-208	ENST00000495188	HCN4	Q9Y3Q4	1203 aa		11.06	□□□□□ -0.64
RNF146-208	ENST00000495188	VSIG8	P0DPA2	414 aa		11.05	□□□□□ -0.64
RNF146-208	ENST00000495188	DBN1	Q16643	649 aa		11.05	□□□□□ -0.64
RNF146-208	ENST00000495188	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.05	□□□□□ -0.64
RNF146-208	ENST00000495188	EFHC2	Q5JST6	749 aa		11.05	□□□□□ -0.64
RNF146-208	ENST00000495188	C1orf53	Q5VUE5	145 aa		11.05	□□□□□ -0.64
RNF146-208	ENST00000495188	BICDL1	Q6ZP65	573 aa		11.05	□□□□□ -0.64
RNF146-208	ENST00000495188	VWA5B2	Q8N398	1253 aa		11.05	□□□□□ -0.64
RNF146-208	ENST00000495188	RETREG2	Q8NC44	543 aa		11.05	□□□□□ -0.64
RNF146-208	ENST00000495188	PHACTR1	Q9C0D0	580 aa		11.05	□□□□□ -0.64
RNF146-208	ENST00000495188	ATP2B4	P23634	1241 aa		11.04	□□□□□ -0.64
RNF146-208	ENST00000495188	FKBP5	Q13451	457 aa	Predicted RBP	11.04	□□□□□ -0.64
RNF146-208	ENST00000495188	TREML4	Q6UXN2	200 aa		11.04	□□□□□ -0.64
RNF146-208	ENST00000495188	RHPN1	Q8TCX5	695 aa		11.04	□□□□□ -0.64
RNF146-208	ENST00000495188	GPC6	Q9Y625	555 aa	Predicted RBP	11.04	□□□□□ -0.64
RNF146-208	ENST00000495188	PDE4C	Q08493	712 aa		11.03	□□□□□ -0.64
RNF146-208	ENST00000495188	ALDH16A1	Q8IZ83	802 aa		11.03	□□□□□ -0.64
RNF146-208	ENST00000495188	NGLY1	Q96IV0	654 aa		11.03	□□□□□ -0.64
RNF146-208	ENST00000495188	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
RNF146-208	ENST00000495188	SLAIN2	Q9P270	581 aa		11.03	□□□□□ -0.64
RNF146-208	ENST00000495188		A0A1W2PNR3	127 aa		11.02	□□□□□ -0.65
RNF146-208	ENST00000495188	FOXR1	Q6PIV2	292 aa		11.02	□□□□□ -0.65
RNF146-208	ENST00000495188	ZIC5	Q96T25	663 aa		11.02	□□□□□ -0.65
RNF146-208	ENST00000495188	ERBB4	Q15303	1308 aa		11.02	□□□□□ -0.65
RNF146-208	ENST00000495188	CARNS1	A5YM72	827 aa		11.01	□□□□□ -0.65
RNF146-208	ENST00000495188	NLRP8	Q86W28	1048 aa		11.01	□□□□□ -0.65
RNF146-208	ENST00000495188	GJA3	Q9Y6H8	435 aa		11.01	□□□□□ -0.65
RNF146-208	ENST00000495188	THBS1	P07996	1170 aa		11	□□□□□ -0.65
RNF146-208	ENST00000495188	GTPBP3	Q969Y2	492 aa	Known RBP	11	□□□□□ -0.65
RNF146-208	ENST00000495188	NEUROD4	Q9HD90	331 aa		11	□□□□□ -0.65
RNF146-208	ENST00000495188	RTN1	Q16799	776 aa		10.99	□□□□□ -0.65
RNF146-208	ENST00000495188	FIGNL1	Q6PIW4	674 aa		10.99	□□□□□ -0.65
RNF146-208	ENST00000495188	COL26A1	Q96A83	441 aa		10.99	□□□□□ -0.65
RNF146-208	ENST00000495188	TRERF1	Q96PN7	1200 aa		10.99	□□□□□ -0.65
RNF146-208	ENST00000495188	PTCD1	O75127	700 aa	Known RBP	10.98	□□□□□ -0.65
RNF146-208	ENST00000495188	HIF1A	Q16665	826 aa		10.98	□□□□□ -0.65
RNF146-208	ENST00000495188	C7orf43	Q8WVR3	580 aa		10.98	□□□□□ -0.65
RNF146-208	ENST00000495188	MKNK1	Q9BUB5	465 aa		10.98	□□□□□ -0.65
RNF146-208	ENST00000495188	LCE2C	Q5TA81	110 aa		10.97	□□□□□ -0.65
RNF146-208	ENST00000495188	GPR161	Q8N6U8	529 aa	Known RBP	10.97	□□□□□ -0.65
RNF146-208	ENST00000495188	ANKIB1	Q9P2G1	1089 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms