RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 C1orf216Q8TAB5 229 aa10.42□□□□□ -0.74
NCL-210ENST00000494618 PBXIP1Q96AQ6 731 aa10.42□□□□□ -0.74
NCL-210ENST00000494618 GPAMQ9HCL2 828 aa10.42□□□□□ -0.74
NCL-210ENST00000494618 MSX1P28360 303 aa10.41□□□□□ -0.74
NCL-210ENST00000494618 TEAD4Q15561 434 aa10.4□□□□□ -0.74
NCL-210ENST00000494618 C1orf115Q9H7X2 142 aa10.4□□□□□ -0.74
NCL-210ENST00000494618 CUEDC1Q9NWM3 386 aaPredicted RBP10.4□□□□□ -0.74
NCL-210ENST00000494618 NOVA2Q9UNW9 492 aaKnown RBP10.4□□□□□ -0.74
NCL-210ENST00000494618 ZNF232Q9UNY5 417 aa10.4□□□□□ -0.74
NCL-210ENST00000494618 USP3Q9Y6I4 520 aa10.4□□□□□ -0.74
NCL-210ENST00000494618 TATP17735 454 aaPredicted RBP10.39□□□□□ -0.75
NCL-210ENST00000494618 NOS2P35228 1153 aa10.39□□□□□ -0.75
NCL-210ENST00000494618 GMPRP36959 345 aa10.39□□□□□ -0.75
NCL-210ENST00000494618 PSMA6P60900 246 aaKnown RBP10.39□□□□□ -0.75
NCL-210ENST00000494618 ELOAQ14241 798 aaKnown RBP10.39□□□□□ -0.75
NCL-210ENST00000494618 LBRQ14739 615 aaKnown RBP10.39□□□□□ -0.75
NCL-210ENST00000494618 DBN1Q16643 649 aa10.39□□□□□ -0.75
NCL-210ENST00000494618 TBCELQ5QJ74 424 aa10.39□□□□□ -0.75
NCL-210ENST00000494618 ZNF295-AS1Q8N0V1 137 aa10.39□□□□□ -0.75
NCL-210ENST00000494618 GAS2L2Q8NHY3 880 aa10.39□□□□□ -0.75
NCL-210ENST00000494618 L3MBTL2Q969R5 705 aa10.39□□□□□ -0.75
NCL-210ENST00000494618 ARXQ96QS3 562 aa10.39□□□□□ -0.75
NCL-210ENST00000494618 NUCKS1Q9H1E3 243 aaKnown RBP10.39□□□□□ -0.75
NCL-210ENST00000494618 TSPAN10Q9H1Z9 355 aaPredicted RBP10.39□□□□□ -0.75
NCL-210ENST00000494618 ZDHHC3Q9NYG2 299 aa10.39□□□□□ -0.75
NCL-210ENST00000494618 SERTM1A2A2V5 107 aa10.38□□□□□ -0.75
NCL-210ENST00000494618 ATG7O95352 703 aa10.38□□□□□ -0.75
NCL-210ENST00000494618 SRPK2P78362 688 aaKnown RBP10.38□□□□□ -0.75
NCL-210ENST00000494618 EFHC2Q5JST6 749 aa10.38□□□□□ -0.75
NCL-210ENST00000494618 ZNF837Q96EG3 531 aaPredicted RBP10.38□□□□□ -0.75
NCL-210ENST00000494618 PARP3Q9Y6F1 533 aa10.38□□□□□ -0.75
NCL-210ENST00000494618 ATAD2Q6PL18 1390 aa10.38□□□□□ -0.75
NCL-210ENST00000494618 SUPT5HO00267 1087 aaKnown RBP10.37□□□□□ -0.75
NCL-210ENST00000494618 WIPF1O43516 503 aa10.37□□□□□ -0.75
NCL-210ENST00000494618 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
NCL-210ENST00000494618 TRERF1Q96PN7 1200 aa10.37□□□□□ -0.75
NCL-210ENST00000494618 RUBCNLQ9H714 662 aa10.37□□□□□ -0.75
NCL-210ENST00000494618 PPP1R12BO60237 982 aaPredicted RBP10.36□□□□□ -0.75
NCL-210ENST00000494618 ARSJQ5FYB0 599 aaPredicted RBP10.36□□□□□ -0.75
NCL-210ENST00000494618 GPR161Q8N6U8 529 aaKnown RBP10.36□□□□□ -0.75
NCL-210ENST00000494618 SCG3Q8WXD2 468 aaKnown RBP10.36□□□□□ -0.75
NCL-210ENST00000494618 CRISPLD1Q9H336 500 aa10.36□□□□□ -0.75
NCL-210ENST00000494618 PPP1R15AO75807 674 aaPredicted RBP10.35□□□□□ -0.75
NCL-210ENST00000494618 ZDHHC1Q8WTX9 485 aa10.35□□□□□ -0.75
NCL-210ENST00000494618 ACIN1Q9UKV3 1341 aaKnown RBP10.34□□□□□ -0.75
NCL-210ENST00000494618 BICDL1Q6ZP65 573 aa10.34□□□□□ -0.75
NCL-210ENST00000494618 STAG2Q8N3U4 1231 aa10.34□□□□□ -0.75
NCL-210ENST00000494618 CHMP7Q8WUX9 453 aaPredicted RBP10.34□□□□□ -0.75
NCL-210ENST00000494618 GTPBP3Q969Y2 492 aaKnown RBP10.34□□□□□ -0.75
NCL-210ENST00000494618 COL25A1Q9BXS0 654 aaPredicted RBP10.34□□□□□ -0.75
NCL-210ENST00000494618 ATP4AP20648 1035 aa10.33□□□□□ -0.76
NCL-210ENST00000494618 INSM1Q01101 510 aaPredicted RBP10.33□□□□□ -0.76
NCL-210ENST00000494618 SWI5Q1ZZU3 235 aa10.33□□□□□ -0.76
NCL-210ENST00000494618 FIGNL1Q6PIW4 674 aa10.33□□□□□ -0.76
NCL-210ENST00000494618 PHF24Q9UPV7 400 aa10.33□□□□□ -0.76
NCL-210ENST00000494618 GJA3Q9Y6H8 435 aa10.33□□□□□ -0.76
NCL-210ENST00000494618 EML1O00423 815 aa10.32□□□□□ -0.76
NCL-210ENST00000494618 C21orf2O43822 256 aa10.32□□□□□ -0.76
NCL-210ENST00000494618 IGFBP4P22692 258 aa10.32□□□□□ -0.76
NCL-210ENST00000494618 TXLNAP40222 546 aa10.32□□□□□ -0.76
NCL-210ENST00000494618 HIRAP54198 1017 aaPredicted RBP10.32□□□□□ -0.76
NCL-210ENST00000494618 NLRP8Q86W28 1048 aa10.32□□□□□ -0.76
NCL-210ENST00000494618 NEUROD4Q9HD90 331 aa10.32□□□□□ -0.76
NCL-210ENST00000494618 ZMIZ1Q9ULJ6 1067 aa10.32□□□□□ -0.76
NCL-210ENST00000494618 A0A1W2PNR3 127 aa10.31□□□□□ -0.76
NCL-210ENST00000494618 C1orf53Q5VUE5 145 aa10.31□□□□□ -0.76
NCL-210ENST00000494618 CNTNAP3BQ96NU0 1288 aa10.31□□□□□ -0.76
NCL-210ENST00000494618 C2orf49Q9BVC5 232 aaPredicted RBP10.31□□□□□ -0.76
NCL-210ENST00000494618 CNTNAP3Q9BZ76 1288 aa10.31□□□□□ -0.76
NCL-210ENST00000494618 HCN4Q9Y3Q4 1203 aa10.31□□□□□ -0.76
NCL-210ENST00000494618 GPC6Q9Y625 555 aaPredicted RBP10.31□□□□□ -0.76
NCL-210ENST00000494618 GPR25O00155 361 aa10.3□□□□□ -0.76
NCL-210ENST00000494618 LGR5O75473 907 aa10.3□□□□□ -0.76
NCL-210ENST00000494618 POTEAQ6S8J7 498 aa10.3□□□□□ -0.76
NCL-210ENST00000494618 ZIC5Q96T25 663 aa10.3□□□□□ -0.76
NCL-210ENST00000494618 CFHR5Q9BXR6 569 aa10.3□□□□□ -0.76
NCL-210ENST00000494618 SH3PXD2AQ5TCZ1 1133 aa10.29□□□□□ -0.76
NCL-210ENST00000494618 RHPN1Q8TCX5 695 aa10.29□□□□□ -0.76
NCL-210ENST00000494618 STK32AQ8WU08 396 aa10.29□□□□□ -0.76
NCL-210ENST00000494618 VTI1AQ96AJ9 217 aa10.29□□□□□ -0.76
NCL-210ENST00000494618 ARID3AQ99856 593 aa10.29□□□□□ -0.76
NCL-210ENST00000494618 FOXO3O43524 673 aa10.28□□□□□ -0.76
NCL-210ENST00000494618 WEE1P30291 646 aa10.28□□□□□ -0.76
NCL-210ENST00000494618 PHACTR1Q9C0D0 580 aa10.28□□□□□ -0.76
NCL-210ENST00000494618 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.28□□□□□ -0.761e-9■■■■□ 20.7
NCL-210ENST00000494618 NSFL1CQ9UNZ2 370 aaKnown RBP10.28□□□□□ -0.76
NCL-210ENST00000494618 PCDHGC4Q9Y5F7 938 aa10.28□□□□□ -0.76
NCL-210ENST00000494618 THBS1P07996 1170 aa10.27□□□□□ -0.77
NCL-210ENST00000494618 RNFT1Q5M7Z0 435 aa10.27□□□□□ -0.77
NCL-210ENST00000494618 TMEM164Q5U3C3 297 aa10.27□□□□□ -0.77
NCL-210ENST00000494618 ALDH16A1Q8IZ83 802 aa10.27□□□□□ -0.77
NCL-210ENST00000494618 ZCCHC2Q9C0B9 1178 aaKnown RBP10.27□□□□□ -0.77
NCL-210ENST00000494618 MBIPQ9NS73 344 aa10.27□□□□□ -0.77
NCL-210ENST00000494618 ANKIB1Q9P2G1 1089 aa10.27□□□□□ -0.77
NCL-210ENST00000494618 ATXN7L1Q9ULK2 861 aaPredicted RBP10.27□□□□□ -0.77
NCL-210ENST00000494618 ATXN7O15265 892 aaPredicted RBP10.26□□□□□ -0.77
NCL-210ENST00000494618 MX2P20592 715 aa10.26□□□□□ -0.77
NCL-210ENST00000494618 KRT76Q01546 638 aa10.26□□□□□ -0.77
NCL-210ENST00000494618 HIF1AQ16665 826 aa10.26□□□□□ -0.77
NCL-210ENST00000494618 SRSF11Q05519 484 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms