RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 NARFQ9UHQ1 456 aa32.15■■■□□ 2.74
TTC3-224ENST00000494243 ARHGAP27Q6ZUM4 889 aa32.14■■■□□ 2.74
TTC3-224ENST00000494243 COL15A1P39059 1388 aa32.14■■■□□ 2.74
TTC3-224ENST00000494243 PHACTR3Q96KR7 559 aa32.12■■■□□ 2.73
TTC3-224ENST00000494243 BCL2L12Q9HB09 334 aa32.12■■■□□ 2.73
TTC3-224ENST00000494243 PIM2Q9P1W9 311 aa32.12■■■□□ 2.73
TTC3-224ENST00000494243 ZNF496Q96IT1 587 aaPredicted RBP32.11■■■□□ 2.73
TTC3-224ENST00000494243 CHRNA5P30532 468 aa32.1■■■□□ 2.73
TTC3-224ENST00000494243 TEFQ10587 303 aa32.1■■■□□ 2.73
TTC3-224ENST00000494243 NFIXQ14938 502 aa32.1■■■□□ 2.73
TTC3-224ENST00000494243 ZNF790Q6PG37 636 aa32.1■■■□□ 2.73
TTC3-224ENST00000494243 TTC5Q8N0Z6 440 aa32.1■■■□□ 2.73
TTC3-224ENST00000494243 CANXP27824 592 aaKnown RBP32.09■■■□□ 2.73
TTC3-224ENST00000494243 RSPH6AQ9H0K4 717 aa32.09■■■□□ 2.73
TTC3-224ENST00000494243 SIPA1L3O60292 1781 aaPredicted RBP32.09■■■□□ 2.73
TTC3-224ENST00000494243 ARFGEF1Q9Y6D6 1849 aa32.08■■■□□ 2.73
TTC3-224ENST00000494243 CFAP53Q96M91 514 aa32.08■■■□□ 2.73
TTC3-224ENST00000494243 CEMIPQ8WUJ3 1361 aa32.07■■■□□ 2.73
TTC3-224ENST00000494243 KIF3CO14782 793 aa32.07■■■□□ 2.72
TTC3-224ENST00000494243 STARD3NLO95772 234 aa32.07■■■□□ 2.72
TTC3-224ENST00000494243 PRKAR2BP31323 418 aa32.07■■■□□ 2.72
TTC3-224ENST00000494243 DALRD3Q5D0E6 543 aaKnown RBP32.07■■■□□ 2.72
TTC3-224ENST00000494243 PPP2R1AP30153 589 aa32.06■■■□□ 2.72
TTC3-224ENST00000494243 EIF5P55010 431 aaKnown RBP32.06■■■□□ 2.72
TTC3-224ENST00000494243 HEG1Q9ULI3 1381 aa32.06■■■□□ 2.72
TTC3-224ENST00000494243 NRXN2Q9P2S2 1712 aa32.04■■■□□ 2.72
TTC3-224ENST00000494243 AFDNP55196 1824 aaKnown RBP32.04■■■□□ 2.72
TTC3-224ENST00000494243 SERPINB2P05120 415 aa32.02■■■□□ 2.72
TTC3-224ENST00000494243 TEX13AQ9BXU3 409 aaPredicted RBP32.02■■■□□ 2.72
TTC3-224ENST00000494243 NUDCQ9Y266 331 aa32.01■■■□□ 2.71
TTC3-224ENST00000494243 KCNQ3O43525 872 aa32■■■□□ 2.71
TTC3-224ENST00000494243 C9orf131Q5VYM1 1079 aa32■■■□□ 2.71
TTC3-224ENST00000494243 FMNL2Q96PY5 1086 aa31.99■■■□□ 2.71
TTC3-224ENST00000494243 A0A087WZG4 1122 aa31.98■■■□□ 2.71
TTC3-224ENST00000494243 U2AF1L5P0DN76 240 aaPredicted RBP31.98■■■□□ 2.71
TTC3-224ENST00000494243 HSPA6P17066 643 aa31.98■■■□□ 2.71
TTC3-224ENST00000494243 U2AF1Q01081 240 aaKnown RBP eCLIP31.98■■■□□ 2.71
TTC3-224ENST00000494243 BTBD11A6QL63 1104 aa31.97■■■□□ 2.71
TTC3-224ENST00000494243 A1BGP04217 495 aa31.95■■■□□ 2.71
TTC3-224ENST00000494243 IL6STP40189 918 aaPredicted RBP31.95■■■□□ 2.71
TTC3-224ENST00000494243 BICDL1Q6ZP65 573 aa31.95■■■□□ 2.71
TTC3-224ENST00000494243 TBC1D9BQ66K14 1250 aa31.94■■■□□ 2.7
TTC3-224ENST00000494243 NMRK2Q9NPI5 230 aa31.94■■■□□ 2.7
TTC3-224ENST00000494243 TBC1D2BQ9UPU7 963 aa31.94■■■□□ 2.7
TTC3-224ENST00000494243 CARMIL3Q8ND23 1372 aa31.94■■■□□ 2.7
TTC3-224ENST00000494243 CEP350Q5VT06 3117 aa31.92■■■□□ 2.7
TTC3-224ENST00000494243 MCM10Q7L590 875 aa31.92■■■□□ 2.7
TTC3-224ENST00000494243 ZNF330Q9Y3S2 320 aaPredicted RBP31.91■■■□□ 2.7
TTC3-224ENST00000494243 USP16Q9Y5T5 823 aa31.91■■■□□ 2.7
TTC3-224ENST00000494243 SCN7AQ01118 1682 aa31.9■■■□□ 2.7
TTC3-224ENST00000494243 DLEC1Q9Y238 1755 aa31.9■■■□□ 2.7
TTC3-224ENST00000494243 RNF181Q9P0P0 153 aa31.9■■■□□ 2.7
TTC3-224ENST00000494243 SBF1O95248 1867 aa31.89■■■□□ 2.7
TTC3-224ENST00000494243 TOMM70O94826 608 aa31.89■■■□□ 2.7
TTC3-224ENST00000494243 C2CD5Q86YS7 1000 aa31.89■■■□□ 2.7
TTC3-224ENST00000494243 RTF1Q92541 710 aaKnown RBP31.89■■■□□ 2.7
TTC3-224ENST00000494243 PRAMEF22A3QJZ6 481 aa31.87■■■□□ 2.69
TTC3-224ENST00000494243 CAMTA2O94983 1202 aa31.87■■■□□ 2.69
TTC3-224ENST00000494243 DCTN1Q14203 1278 aa31.87■■■□□ 2.69
TTC3-224ENST00000494243 TTLL6Q8N841 843 aa31.87■■■□□ 2.69
TTC3-224ENST00000494243 H0YIN7 160 aa31.86■■■□□ 2.69
TTC3-224ENST00000494243 HTATSF1O43719 755 aaKnown RBP31.86■■■□□ 2.69
TTC3-224ENST00000494243 RASSF7Q02833 373 aa31.85■■■□□ 2.69
TTC3-224ENST00000494243 ANKRD31Q8N7Z5 1873 aa31.84■■■□□ 2.69
TTC3-224ENST00000494243 PRELPP51888 382 aa31.84■■■□□ 2.69
TTC3-224ENST00000494243 PRR5LQ6MZQ0 368 aa31.84■■■□□ 2.69
TTC3-224ENST00000494243 SNRPA1P09661 255 aaKnown RBP31.83■■■□□ 2.69
TTC3-224ENST00000494243 PIP4K2AP48426 406 aaPredicted RBP31.83■■■□□ 2.69
TTC3-224ENST00000494243 CCDC24Q8N4L8 307 aa31.83■■■□□ 2.69
TTC3-224ENST00000494243 BRIP1Q9BX63 1249 aa31.83■■■□□ 2.69
TTC3-224ENST00000494243 DZIP3Q86Y13 1208 aaKnown RBP31.82■■■□□ 2.68
TTC3-224ENST00000494243 NPM2Q86SE8 214 aaKnown RBP31.81■■■□□ 2.68
TTC3-224ENST00000494243 SETDB2Q96T68 719 aa31.81■■■□□ 2.68
TTC3-224ENST00000494243 KDM2BQ8NHM5 1336 aa31.8■■■□□ 2.68
TTC3-224ENST00000494243 BCORQ6W2J9 1755 aa31.79■■■□□ 2.68
TTC3-224ENST00000494243 PDE6BP35913 854 aa31.79■■■□□ 2.68
TTC3-224ENST00000494243 TAF7Q15545 349 aaPredicted RBP31.79■■■□□ 2.68
TTC3-224ENST00000494243 LMNB1P20700 586 aa31.78■■■□□ 2.68
TTC3-224ENST00000494243 PDZRN3Q9UPQ7 1066 aa31.78■■■□□ 2.68
TTC3-224ENST00000494243 NBPF26B4DH59 902 aa31.77■■■□□ 2.68
TTC3-224ENST00000494243 NFKBIEO00221 500 aa31.77■■■□□ 2.68
TTC3-224ENST00000494243 NBPF10Q6P3W6 841 aaKnown RBP31.77■■■□□ 2.68
TTC3-224ENST00000494243 NBPF15Q8N660 670 aa31.77■■■□□ 2.68
TTC3-224ENST00000494243 RBM46Q8TBY0 533 aaKnown RBP31.77■■■□□ 2.68
TTC3-224ENST00000494243 RRAGCQ9HB90 399 aa31.77■■■□□ 2.68
TTC3-224ENST00000494243 ZNF622Q969S3 477 aaKnown RBP eCLIP31.76■■■□□ 2.671e-6■■■□□ 15.1
TTC3-224ENST00000494243 PLEKHF1Q96S99 279 aa31.76■■■□□ 2.67
TTC3-224ENST00000494243 MIS18AQ9NYP9 233 aa31.76■■■□□ 2.67
TTC3-224ENST00000494243 ZC3H4Q9UPT8 1303 aaKnown RBP31.75■■■□□ 2.67
TTC3-224ENST00000494243 COL11A2P13942 1736 aaPredicted RBP31.75■■■□□ 2.67
TTC3-224ENST00000494243 APLP1P51693 650 aa31.75■■■□□ 2.67
TTC3-224ENST00000494243 CNBD1Q8NA66 436 aa31.75■■■□□ 2.67
TTC3-224ENST00000494243 CLEC4GQ6UXB4 293 aa31.74■■■□□ 2.67
TTC3-224ENST00000494243 C16orf71Q8IYS4 520 aaPredicted RBP31.72■■■□□ 2.67
TTC3-224ENST00000494243 TNRC6CQ9HCJ0 1690 aaKnown RBP31.71■■■□□ 2.67
TTC3-224ENST00000494243 C21orf2O43822 256 aa31.71■■■□□ 2.67
TTC3-224ENST00000494243 DLG5Q8TDM6 1919 aa31.71■■■□□ 2.67
TTC3-224ENST00000494243 CCDC88AQ3V6T2 1871 aa31.69■■■□□ 2.66
TTC3-224ENST00000494243 GLTPD2A6NH11 291 aa31.69■■■□□ 2.66
TTC3-224ENST00000494243 SRGNP10124 158 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms