RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 KCPQ6ZWJ8 1503 aa15.25■□□□□ 0.03
CTSA-209ENST00000493522 CCER2I3L3R5 266 aa15.24■□□□□ 0.03
CTSA-209ENST00000493522 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
CTSA-209ENST00000493522 HSPA6P17066 643 aa15.24■□□□□ 0.03
CTSA-209ENST00000493522 RIPK4P57078 832 aa15.24■□□□□ 0.03
CTSA-209ENST00000493522 LMOD3Q0VAK6 560 aa15.24■□□□□ 0.03
CTSA-209ENST00000493522 TRAPPC3LQ5T215 181 aa15.23■□□□□ 0.03
CTSA-209ENST00000493522 IFFO2Q5TF58 517 aa15.23■□□□□ 0.03
CTSA-209ENST00000493522 NLGN1Q8N2Q7 840 aa15.23■□□□□ 0.03
CTSA-209ENST00000493522 PXDNLA1KZ92 1463 aa15.22■□□□□ 0.03
CTSA-209ENST00000493522 TGFB2P61812 414 aa15.22■□□□□ 0.03
CTSA-209ENST00000493522 MIER1Q8N108 512 aa15.22■□□□□ 0.03
CTSA-209ENST00000493522 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
CTSA-209ENST00000493522 THUMPD2Q9BTF0 503 aaKnown RBP15.22■□□□□ 0.03
CTSA-209ENST00000493522 MYH14Q7Z406 1995 aaKnown RBP15.22■□□□□ 0.03
CTSA-209ENST00000493522 APAF1O14727 1248 aa15.21■□□□□ 0.03
CTSA-209ENST00000493522 TTC5Q8N0Z6 440 aa15.21■□□□□ 0.03
CTSA-209ENST00000493522 CNTNAP4Q9C0A0 1308 aa15.2■□□□□ 0.02
CTSA-209ENST00000493522 C10orf71Q711Q0 1435 aa15.2■□□□□ 0.02
CTSA-209ENST00000493522 SLC39A6Q13433 755 aa15.2■□□□□ 0.02
CTSA-209ENST00000493522 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
CTSA-209ENST00000493522 CCDC87Q9NVE4 849 aa15.2■□□□□ 0.02
CTSA-209ENST00000493522 BCS1LQ9Y276 419 aa15.2■□□□□ 0.02
CTSA-209ENST00000493522 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
CTSA-209ENST00000493522 PTCD1O75127 700 aaKnown RBP15.19■□□□□ 0.02
CTSA-209ENST00000493522 RFC4P35249 363 aa15.19■□□□□ 0.02
CTSA-209ENST00000493522 SLC4A9Q96Q91 983 aa15.19■□□□□ 0.02
CTSA-209ENST00000493522 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
CTSA-209ENST00000493522 BTBD11A6QL63 1104 aa15.18■□□□□ 0.02
CTSA-209ENST00000493522 KIF3CO14782 793 aa15.18■□□□□ 0.02
CTSA-209ENST00000493522 ARHGEF1Q92888 912 aaKnown RBP15.18■□□□□ 0.02
CTSA-209ENST00000493522 PARP3Q9Y6F1 533 aa15.18■□□□□ 0.02
CTSA-209ENST00000493522 A0A0G2JLW4 131 aa15.17■□□□□ 0.02
CTSA-209ENST00000493522 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
CTSA-209ENST00000493522 GYS1P13807 737 aa15.17■□□□□ 0.02
CTSA-209ENST00000493522 TRIM35Q9UPQ4 493 aa15.17■□□□□ 0.02
CTSA-209ENST00000493522 TAF7Q15545 349 aaPredicted RBP15.16■□□□□ 0.02
CTSA-209ENST00000493522 ZNF790Q6PG37 636 aa15.16■□□□□ 0.02
CTSA-209ENST00000493522 KIAA1551Q9HCM1 1747 aa15.16■□□□□ 0.02
CTSA-209ENST00000493522 DPEP1P16444 411 aa15.15■□□□□ 0.02
CTSA-209ENST00000493522 ARHGAP27Q6ZUM4 889 aa15.15■□□□□ 0.02
CTSA-209ENST00000493522 HEG1Q9ULI3 1381 aa15.14■□□□□ 0.01
CTSA-209ENST00000493522 N4BP2Q86UW6 1770 aaPredicted RBP15.14■□□□□ 0.01
CTSA-209ENST00000493522 KCNQ3O43525 872 aa15.14■□□□□ 0.01
CTSA-209ENST00000493522 ZNF496Q96IT1 587 aaPredicted RBP15.14■□□□□ 0.01
CTSA-209ENST00000493522 FMNL2Q96PY5 1086 aa15.14■□□□□ 0.01
CTSA-209ENST00000493522 MIS18AQ9NYP9 233 aa15.14■□□□□ 0.01
CTSA-209ENST00000493522 TOMM70O94826 608 aa15.13■□□□□ 0.01
CTSA-209ENST00000493522 APLP1P51693 650 aa15.13■□□□□ 0.01
CTSA-209ENST00000493522 DNAJC10Q8IXB1 793 aa15.13■□□□□ 0.01
CTSA-209ENST00000493522 TSPYL4Q9UJ04 414 aa15.13■□□□□ 0.01
CTSA-209ENST00000493522 SALL2Q9Y467 1007 aaPredicted RBP15.13■□□□□ 0.01
CTSA-209ENST00000493522 LAS1LQ9Y4W2 734 aaKnown RBP15.13■□□□□ 0.01
CTSA-209ENST00000493522 CRKLP46109 303 aaKnown RBP15.12■□□□□ 0.01
CTSA-209ENST00000493522 CALD1Q05682 793 aaKnown RBP15.12■□□□□ 0.01
CTSA-209ENST00000493522 PIM2Q9P1W9 311 aa15.11■□□□□ 0.01
CTSA-209ENST00000493522 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
CTSA-209ENST00000493522 SCN7AQ01118 1682 aa15.1■□□□□ 0.01
CTSA-209ENST00000493522 CCDC27Q2M243 656 aa15.1■□□□□ 0.01
CTSA-209ENST00000493522 DALRD3Q5D0E6 543 aaKnown RBP15.1■□□□□ 0.01
CTSA-209ENST00000493522 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
CTSA-209ENST00000493522 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
CTSA-209ENST00000493522 BCORQ6W2J9 1755 aa15.1■□□□□ 0.01
CTSA-209ENST00000493522 BRCA1P38398 1863 aaKnown RBP15.1■□□□□ 0.01
CTSA-209ENST00000493522 KCNA3P22001 575 aa15.09■□□□□ 0.01
CTSA-209ENST00000493522 FKBP8Q14318 412 aa15.09■□□□□ 0.01
CTSA-209ENST00000493522 C9orf131Q5VYM1 1079 aa15.09■□□□□ 0.01
CTSA-209ENST00000493522 WWC1Q8IX03 1113 aa15.09■□□□□ 0.01
CTSA-209ENST00000493522 NMRK2Q9NPI5 230 aa15.09■□□□□ 0.01
CTSA-209ENST00000493522 SRP68Q9UHB9 627 aaKnown RBP15.09■□□□□ 0.01
CTSA-209ENST00000493522 C16orf71Q8IYS4 520 aaPredicted RBP15.08■□□□□ 0
CTSA-209ENST00000493522 IFT57Q9NWB7 429 aa15.08■□□□□ 0
CTSA-209ENST00000493522 BABAM1Q9NWV8 329 aa15.08■□□□□ 0
CTSA-209ENST00000493522 ZPR1O75312 459 aa15.07■□□□□ 0
CTSA-209ENST00000493522 CYP19A1P11511 503 aaPredicted RBP15.07■□□□□ 0
CTSA-209ENST00000493522 EIF4A1P60842 406 aaKnown RBP15.07■□□□□ 0
CTSA-209ENST00000493522 GNAI1P63096 354 aa15.07■□□□□ 0
CTSA-209ENST00000493522 DDR1Q08345 913 aa15.07■□□□□ 0
CTSA-209ENST00000493522 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
CTSA-209ENST00000493522 CFAP44Q96MT7 982 aa15.07■□□□□ 0
CTSA-209ENST00000493522 TEX13AQ9BXU3 409 aaPredicted RBP15.07■□□□□ 0
CTSA-209ENST00000493522 ARFGEF1Q9Y6D6 1849 aa15.07■□□□□ 0
CTSA-209ENST00000493522 KDM2BQ8NHM5 1336 aa15.07■□□□□ 0
CTSA-209ENST00000493522 PCNTO95613 3336 aa15.07■□□□□ 0
CTSA-209ENST00000493522 PRAMEF22A3QJZ6 481 aa15.06■□□□□ 0
CTSA-209ENST00000493522 CHL1O00533 1208 aa15.06■□□□□ 0
CTSA-209ENST00000493522 STARD3NLO95772 234 aa15.06■□□□□ 0
CTSA-209ENST00000493522 SNRPA1P09661 255 aaKnown RBP15.06■□□□□ 0
CTSA-209ENST00000493522 NGEFQ8N5V2 710 aa15.06■□□□□ 0
CTSA-209ENST00000493522 RBM46Q8TBY0 533 aaKnown RBP15.06■□□□□ 0
CTSA-209ENST00000493522 MBIPQ9NS73 344 aa15.06■□□□□ 0
CTSA-209ENST00000493522 POLRMTO00411 1230 aaKnown RBP15.05■□□□□ -0
CTSA-209ENST00000493522 INTS5Q6P9B9 1019 aaKnown RBP15.05■□□□□ -0
CTSA-209ENST00000493522 RNF181Q9P0P0 153 aa15.05■□□□□ -0
CTSA-209ENST00000493522 ZBTB1Q9Y2K1 713 aa15.05■□□□□ -0
CTSA-209ENST00000493522 CACNA1FO60840 1977 aa15.04■□□□□ -0
CTSA-209ENST00000493522 COL15A1P39059 1388 aa15.04■□□□□ -0
CTSA-209ENST00000493522 SOS1Q07889 1333 aaPredicted RBP15.04■□□□□ -0
CTSA-209ENST00000493522 IL16Q14005 1332 aa15.04■□□□□ -0
CTSA-209ENST00000493522 ZNF853P0CG23 659 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms