RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 KDM4AO75164 1064 aa24.76■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 TTLL5Q6EMB2 1281 aa24.76■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 FAM200AQ8TCP9 573 aa24.76■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 MAST1Q9Y2H9 1570 aa24.76■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 POLKQ9UBT6 870 aa24.76■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 TRIM35Q9UPQ4 493 aa24.76■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 EVI5LQ96CN4 794 aa24.76■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 XBP1P17861 261 aa24.75■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 NLRP2Q9NX02 1062 aa24.75■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 F13A1P00488 732 aa24.75■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 DNAAF4Q8WXU2 420 aa24.75■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 PPP1R42Q7Z4L9 355 aa24.75■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 BOLA2Q9H3K6 86 aa24.75■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 LMBRD1Q9NUN5 540 aa24.74■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 TTC21BQ7Z4L5 1316 aa24.74■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 ERLIN1O75477 346 aa24.74■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 PPP1R9BQ96SB3 815 aa24.74■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 GSDMDP57764 484 aa24.73■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 PPFIBP1Q86W92 1011 aa24.73■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 ATP2B1P20020 1258 aa24.73■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 CCDC158Q5M9N0 1113 aa24.73■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 TRMT1Q9NXH9 659 aaKnown RBP24.73■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 STX1AQ16623 288 aa24.73■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 RHPN1Q8TCX5 695 aa24.73■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 BRMS1Q9HCU9 246 aa24.73■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 MARCH6O60337 910 aa24.72■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 ATP8B2P98198 1209 aa24.72■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 SART3Q15020 963 aaKnown RBP24.72■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 CEP135Q66GS9 1140 aa24.72■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 CTNNA3Q9UI47 895 aa24.72■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 A0A1W2PP64 1363 aa24.72■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 EIF3JO75822 258 aaKnown RBP24.72■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 PHACTR3Q96KR7 559 aa24.72■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 CAGE1Q8TC20 777 aa24.72■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 CFAP100Q494V2 611 aa24.71■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 CCDC186Q7Z3E2 898 aa24.71■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 ZFYVE9O95405 1425 aa24.71■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 TBC1D2BQ9UPU7 963 aa24.71■■□□□ 1.55
CHKB-CPT1B-203ENST00000492556 TTC39AQ5SRH9 613 aa24.7■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 CD109Q6YHK3 1445 aa24.7■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 ZSCAN12O43309 604 aa24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 SMAP1Q8IYB5 467 aaPredicted RBP24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 CCDC171Q6TFL3 1326 aa24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 PIK3R4Q99570 1358 aa24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 HMGB1P09429 215 aaKnown RBP24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 PIP4K2AP48426 406 aaPredicted RBP24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 BRPF1P55201 1214 aaPredicted RBP24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 DNM1Q05193 864 aaKnown RBP24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 GAS2L3Q86XJ1 694 aa24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 CCDC8Q9H0W5 538 aaPredicted RBP24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 CALCOCO1Q9P1Z2 691 aa24.69■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 CDKL5O76039 1030 aa24.68■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 MYL6BP14649 208 aa24.68■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 ANO6Q4KMQ2 910 aa24.68■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 GTPBP4Q9BZE4 634 aaKnown RBP24.68■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 CHMLP26374 656 aa24.68■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 PTPRTO14522 1441 aa24.68■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 U3KPZ7 1027 aaPredicted RBP24.67■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 FSIP1Q8NA03 581 aa24.67■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 NECAB1Q8N987 351 aa24.67■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.67■■□□□ 1.542e-6■■■□□ 18.4
CHKB-CPT1B-203ENST00000492556 URI1O94763 535 aaPredicted RBP24.66■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 OTUD7AQ8TE49 926 aaPredicted RBP24.66■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 PBRM1Q86U86 1689 aa24.65■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 HMG20BQ9P0W2 317 aa24.65■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 BCORL1Q5H9F3 1711 aa24.65■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 SNW1Q13573 536 aaKnown RBP24.65■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 TRIM22Q8IYM9 498 aa24.65■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 DACT1Q9NYF0 836 aa24.65■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 GTF2E1P29083 439 aaPredicted RBP24.64■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 AK2P54819 239 aa24.64■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 KRT222Q8N1A0 295 aa24.64■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 CCAR1Q8IX12 1150 aaKnown RBP24.64■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 ZSCAN16Q9H4T2 348 aaPredicted RBP24.64■■□□□ 1.54
CHKB-CPT1B-203ENST00000492556 KDM5AP29375 1690 aaKnown RBP24.64■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 BMS1Q14692 1282 aaKnown RBP24.63■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 ZNF500O60304 480 aaPredicted RBP24.63■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 TYRO3Q06418 890 aa24.63■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 PIBF1Q8WXW3 757 aa24.63■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 KDM5DQ9BY66 1539 aa24.63■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 NAP1L1P55209 391 aaKnown RBP24.63■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 FKBP4Q02790 459 aaKnown RBP eCLIP24.63■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 FBXO31Q5XUX0 539 aaPredicted RBP24.63■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 DBF4Q9UBU7 674 aaPredicted RBP24.63■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 SYNMO15061 1565 aa24.62■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 LARP1Q6PKG0 1096 aaKnown RBP24.62■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 MYRIPQ8NFW9 859 aa24.62■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 SLC26A8Q96RN1 970 aa24.62■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 CLSTN1O94985 981 aa24.62■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 IMMTQ16891 758 aaKnown RBP24.62■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 ESCO1Q5FWF5 840 aa24.62■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 ARHGEF5Q12774 1597 aa24.62■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 USP19O94966 1318 aa24.62■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 TMC6Q7Z403 805 aa24.61■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 C8orf76Q96K31 380 aa24.61■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 TOP1P11387 765 aaKnown RBP24.61■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 GUCY1B3Q02153 619 aa24.61■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 TMEM63CQ9P1W3 806 aa24.61■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 WDR7Q9Y4E6 1490 aa24.61■■□□□ 1.53
CHKB-CPT1B-203ENST00000492556 TSPYL1Q9H0U9 437 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms