RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 LINC00116Q8NCU8 138 aa15.54■□□□□ 0.08
PTPN7-214ENST00000491584 FLAD1Q8NFF5 587 aa15.54■□□□□ 0.08
PTPN7-214ENST00000491584 GRIN3BO60391 1043 aa15.53■□□□□ 0.08
PTPN7-214ENST00000491584 SNRPA1P09661 255 aaKnown RBP15.53■□□□□ 0.08
PTPN7-214ENST00000491584 ITPK1Q13572 414 aa15.53■□□□□ 0.08
PTPN7-214ENST00000491584 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
PTPN7-214ENST00000491584 AK7Q96M32 723 aa15.53■□□□□ 0.08
PTPN7-214ENST00000491584 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
PTPN7-214ENST00000491584 THUMPD2Q9BTF0 503 aaKnown RBP15.53■□□□□ 0.08
PTPN7-214ENST00000491584 CHL1O00533 1208 aa15.52■□□□□ 0.08
PTPN7-214ENST00000491584 RC3H1Q5TC82 1133 aaKnown RBP15.52■□□□□ 0.08
PTPN7-214ENST00000491584 IFT57Q9NWB7 429 aa15.52■□□□□ 0.08
PTPN7-214ENST00000491584 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
PTPN7-214ENST00000491584 CICQ96RK0 1608 aaPredicted RBP15.52■□□□□ 0.08
PTPN7-214ENST00000491584 ATP10DQ9P241 1426 aa15.51■□□□□ 0.07
PTPN7-214ENST00000491584 IL16Q14005 1332 aa15.51■□□□□ 0.07
PTPN7-214ENST00000491584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.51■□□□□ 0.07
PTPN7-214ENST00000491584 GIGYF1O75420 1035 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-214ENST00000491584 SSFA2P28290 1259 aa15.51■□□□□ 0.07
PTPN7-214ENST00000491584 MIS18AQ9NYP9 233 aa15.51■□□□□ 0.07
PTPN7-214ENST00000491584 KIF13BQ9NQT8 1826 aa15.51■□□□□ 0.07
PTPN7-214ENST00000491584 COL5A3P25940 1745 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-214ENST00000491584 ZNF496Q96IT1 587 aaPredicted RBP15.5■□□□□ 0.07
PTPN7-214ENST00000491584 MRC1P22897 1456 aa15.49■□□□□ 0.07
PTPN7-214ENST00000491584 PHF14O94880 888 aa15.49■□□□□ 0.07
PTPN7-214ENST00000491584 SLC4A9Q96Q91 983 aa15.49■□□□□ 0.07
PTPN7-214ENST00000491584 MYH16Q9H6N6 1097 aa15.49■□□□□ 0.07
PTPN7-214ENST00000491584 RTCBQ9Y3I0 505 aaKnown RBP15.49■□□□□ 0.07
PTPN7-214ENST00000491584 HEG1Q9ULI3 1381 aa15.48■□□□□ 0.07
PTPN7-214ENST00000491584 EIF4A1P60842 406 aaKnown RBP15.47■□□□□ 0.07
PTPN7-214ENST00000491584 GOLGA2Q08379 1002 aa15.47■□□□□ 0.07
PTPN7-214ENST00000491584 TRAPPC3LQ5T215 181 aa15.47■□□□□ 0.07
PTPN7-214ENST00000491584 DNAJC10Q8IXB1 793 aa15.47■□□□□ 0.07
PTPN7-214ENST00000491584 CCDC87Q9NVE4 849 aa15.47■□□□□ 0.07
PTPN7-214ENST00000491584 SCN11AQ9UI33 1791 aa15.47■□□□□ 0.07
PTPN7-214ENST00000491584 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.07
PTPN7-214ENST00000491584 GNPATO15228 680 aa15.46■□□□□ 0.07
PTPN7-214ENST00000491584 KCNQ3O43525 872 aa15.46■□□□□ 0.07
PTPN7-214ENST00000491584 RPS6KA4O75676 772 aa15.46■□□□□ 0.07
PTPN7-214ENST00000491584 ADRA2BP18089 450 aa15.46■□□□□ 0.07
PTPN7-214ENST00000491584 CNTNAP4Q9C0A0 1308 aa15.45■□□□□ 0.06
PTPN7-214ENST00000491584 A0A087WZG4 1122 aa15.45■□□□□ 0.06
PTPN7-214ENST00000491584 ZNF853P0CG23 659 aa15.45■□□□□ 0.06
PTPN7-214ENST00000491584 CYP19A1P11511 503 aaPredicted RBP15.45■□□□□ 0.06
PTPN7-214ENST00000491584 CRKLP46109 303 aaKnown RBP15.45■□□□□ 0.06
PTPN7-214ENST00000491584 C4AP0C0L4 1744 aa15.45■□□□□ 0.06
PTPN7-214ENST00000491584 ADAMTS7Q9UKP4 1686 aa15.44■□□□□ 0.06
PTPN7-214ENST00000491584 SOS1Q07889 1333 aaPredicted RBP15.44■□□□□ 0.06
PTPN7-214ENST00000491584 C10orf71Q711Q0 1435 aa15.44■□□□□ 0.06
PTPN7-214ENST00000491584 HOXB7P09629 217 aa15.44■□□□□ 0.06
PTPN7-214ENST00000491584 RFC4P35249 363 aa15.44■□□□□ 0.06
PTPN7-214ENST00000491584 HNRNPUQ00839 825 aaKnown RBP eCLIP15.44■□□□□ 0.06
PTPN7-214ENST00000491584 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
PTPN7-214ENST00000491584 E9PSI1 815 aa15.43■□□□□ 0.06
PTPN7-214ENST00000491584 TJP1Q07157 1748 aa15.43■□□□□ 0.06
PTPN7-214ENST00000491584 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
PTPN7-214ENST00000491584 BRCA1P38398 1863 aaKnown RBP15.42■□□□□ 0.06
PTPN7-214ENST00000491584 CANXP27824 592 aaKnown RBP15.42■□□□□ 0.06
PTPN7-214ENST00000491584 USP16Q9Y5T5 823 aa15.42■□□□□ 0.06
PTPN7-214ENST00000491584 N4BP2Q86UW6 1770 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-214ENST00000491584 ZPR1O75312 459 aa15.41■□□□□ 0.06
PTPN7-214ENST00000491584 MMP10P09238 476 aa15.41■□□□□ 0.06
PTPN7-214ENST00000491584 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
PTPN7-214ENST00000491584 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-214ENST00000491584 INTS5Q6P9B9 1019 aaKnown RBP15.41■□□□□ 0.06
PTPN7-214ENST00000491584 WWC3Q9ULE0 1092 aa15.41■□□□□ 0.06
PTPN7-214ENST00000491584 ERBB4Q15303 1308 aa15.41■□□□□ 0.06
PTPN7-214ENST00000491584 DUSP27Q5VZP5 1158 aa15.4■□□□□ 0.06
PTPN7-214ENST00000491584 A1BGP04217 495 aa15.39■□□□□ 0.05
PTPN7-214ENST00000491584 GYS1P13807 737 aa15.39■□□□□ 0.05
PTPN7-214ENST00000491584 CCDC30Q5VVM6 783 aa15.39■□□□□ 0.05
PTPN7-214ENST00000491584 NLGN1Q8N2Q7 840 aa15.39■□□□□ 0.05
PTPN7-214ENST00000491584 ARHGEF1Q92888 912 aaKnown RBP15.39■□□□□ 0.05
PTPN7-214ENST00000491584 ZNF330Q9Y3S2 320 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-214ENST00000491584 HDGFL1Q5TGJ6 251 aa15.38■□□□□ 0.05
PTPN7-214ENST00000491584 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
PTPN7-214ENST00000491584 STK31Q9BXU1 1019 aa15.38■□□□□ 0.05
PTPN7-214ENST00000491584 GPBP1L1Q9HC44 474 aaPredicted RBP15.38■□□□□ 0.05
PTPN7-214ENST00000491584 DBF4Q9UBU7 674 aaPredicted RBP15.38■□□□□ 0.05
PTPN7-214ENST00000491584 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
PTPN7-214ENST00000491584 KIF3CO14782 793 aa15.37■□□□□ 0.05
PTPN7-214ENST00000491584 EIF5P55010 431 aaKnown RBP15.37■□□□□ 0.05
PTPN7-214ENST00000491584 KCPQ6ZWJ8 1503 aa15.37■□□□□ 0.05
PTPN7-214ENST00000491584 DLG5Q8TDM6 1919 aa15.37■□□□□ 0.05
PTPN7-214ENST00000491584 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
PTPN7-214ENST00000491584 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-214ENST00000491584 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
PTPN7-214ENST00000491584 ZBTB1Q9Y2K1 713 aa15.36■□□□□ 0.05
PTPN7-214ENST00000491584 ZNF521Q96K83 1311 aa15.36■□□□□ 0.05
PTPN7-214ENST00000491584 PRAMEF22A3QJZ6 481 aa15.35■□□□□ 0.05
PTPN7-214ENST00000491584 KCNA3P22001 575 aa15.35■□□□□ 0.05
PTPN7-214ENST00000491584 TGFB2P61812 414 aa15.35■□□□□ 0.05
PTPN7-214ENST00000491584 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
PTPN7-214ENST00000491584 C8orf58Q8NAV2 365 aa15.35■□□□□ 0.05
PTPN7-214ENST00000491584 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
PTPN7-214ENST00000491584 DDX21Q9NR30 783 aaKnown RBP eCLIP15.35■□□□□ 0.05
PTPN7-214ENST00000491584 NARFQ9UHQ1 456 aa15.35■□□□□ 0.05
PTPN7-214ENST00000491584 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
PTPN7-214ENST00000491584 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
PTPN7-214ENST00000491584 RGL2O15211 777 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms