RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TGFB2P61812 414 aa24.01■■□□□ 1.43
HMGN1-219ENST00000491183 DDR1Q08345 913 aa24.01■■□□□ 1.43
HMGN1-219ENST00000491183 A0A0G2JLW4 131 aa24■■□□□ 1.43
HMGN1-219ENST00000491183 BTBD11A6QL63 1104 aa24■■□□□ 1.43
HMGN1-219ENST00000491183 STARD3NLO95772 234 aa24■■□□□ 1.43
HMGN1-219ENST00000491183 CANXP27824 592 aaKnown RBP24■■□□□ 1.43
HMGN1-219ENST00000491183 MCM10Q7L590 875 aa24■■□□□ 1.43
HMGN1-219ENST00000491183 ZPR1O75312 459 aa23.99■■□□□ 1.43
HMGN1-219ENST00000491183 DCTN1Q14203 1278 aa23.99■■□□□ 1.43
HMGN1-219ENST00000491183 NARFQ9UHQ1 456 aa23.99■■□□□ 1.43
HMGN1-219ENST00000491183 COL15A1P39059 1388 aa23.99■■□□□ 1.43
HMGN1-219ENST00000491183 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
HMGN1-219ENST00000491183 RTF1Q92541 710 aaKnown RBP23.98■■□□□ 1.43
HMGN1-219ENST00000491183 FMNL2Q96PY5 1086 aa23.98■■□□□ 1.43
HMGN1-219ENST00000491183 BCL2L12Q9HB09 334 aa23.98■■□□□ 1.43
HMGN1-219ENST00000491183 POLRMTO00411 1230 aaKnown RBP23.97■■□□□ 1.43
HMGN1-219ENST00000491183 HTATSF1O43719 755 aaKnown RBP23.97■■□□□ 1.43
HMGN1-219ENST00000491183 DPEP1P16444 411 aa23.97■■□□□ 1.43
HMGN1-219ENST00000491183 EIF5P55010 431 aaKnown RBP23.97■■□□□ 1.43
HMGN1-219ENST00000491183 TEX13AQ9BXU3 409 aaPredicted RBP23.97■■□□□ 1.43
HMGN1-219ENST00000491183 PLEKHF1Q96S99 279 aa23.96■■□□□ 1.43
HMGN1-219ENST00000491183 KCNA3P22001 575 aa23.95■■□□□ 1.42
HMGN1-219ENST00000491183 A1BGP04217 495 aa23.94■■□□□ 1.42
HMGN1-219ENST00000491183 NFIXQ14938 502 aa23.94■■□□□ 1.42
HMGN1-219ENST00000491183 DLG5Q8TDM6 1919 aa23.93■■□□□ 1.42
HMGN1-219ENST00000491183 RALBP1Q15311 655 aa23.93■■□□□ 1.42
HMGN1-219ENST00000491183 BRCA1P38398 1863 aaKnown RBP23.92■■□□□ 1.42
HMGN1-219ENST00000491183 BCS1LQ9Y276 419 aa23.92■■□□□ 1.42
HMGN1-219ENST00000491183 USP16Q9Y5T5 823 aa23.92■■□□□ 1.42
HMGN1-219ENST00000491183 AFDNP55196 1824 aaKnown RBP23.91■■□□□ 1.42
HMGN1-219ENST00000491183 PRAMEF22A3QJZ6 481 aa23.91■■□□□ 1.42
HMGN1-219ENST00000491183 A0A087WZG4 1122 aa23.9■■□□□ 1.42
HMGN1-219ENST00000491183 IL6STP40189 918 aaPredicted RBP23.9■■□□□ 1.42
HMGN1-219ENST00000491183 NEFMP07197 916 aa23.89■■□□□ 1.41
HMGN1-219ENST00000491183 TAF7Q15545 349 aaPredicted RBP23.89■■□□□ 1.41
HMGN1-219ENST00000491183 TBC1D2BQ9UPU7 963 aa23.89■■□□□ 1.41
HMGN1-219ENST00000491183 NRXN2Q9P2S2 1712 aa23.88■■□□□ 1.41
HMGN1-219ENST00000491183 SERPINB2P05120 415 aa23.88■■□□□ 1.41
HMGN1-219ENST00000491183 MIS18AQ9NYP9 233 aa23.88■■□□□ 1.41
HMGN1-219ENST00000491183 ZNF330Q9Y3S2 320 aaPredicted RBP23.88■■□□□ 1.41
HMGN1-219ENST00000491183 SNRPA1P09661 255 aaKnown RBP23.87■■□□□ 1.41
HMGN1-219ENST00000491183 CHRNA5P30532 468 aa23.87■■□□□ 1.41
HMGN1-219ENST00000491183 NFE2L2Q16236 605 aa23.87■■□□□ 1.41
HMGN1-219ENST00000491183 PIM2Q9P1W9 311 aa23.87■■□□□ 1.41
HMGN1-219ENST00000491183 ADCY9O60503 1353 aa23.87■■□□□ 1.41
HMGN1-219ENST00000491183 ATP10DQ9P241 1426 aa23.86■■□□□ 1.41
HMGN1-219ENST00000491183 PIP4K2AP48426 406 aaPredicted RBP23.86■■□□□ 1.41
HMGN1-219ENST00000491183 TBC1D9BQ66K14 1250 aa23.86■■□□□ 1.41
HMGN1-219ENST00000491183 BICDL1Q6ZP65 573 aa23.86■■□□□ 1.41
HMGN1-219ENST00000491183 THUMPD2Q9BTF0 503 aaKnown RBP23.85■■□□□ 1.41
HMGN1-219ENST00000491183 PNNQ9H307 717 aaKnown RBP23.85■■□□□ 1.41
HMGN1-219ENST00000491183 SCN7AQ01118 1682 aa23.83■■□□□ 1.41
HMGN1-219ENST00000491183 ARFGEF1Q9Y6D6 1849 aa23.83■■□□□ 1.41
HMGN1-219ENST00000491183 CAMTA2O94983 1202 aa23.83■■□□□ 1.41
HMGN1-219ENST00000491183 ARHGAP27Q6ZUM4 889 aa23.83■■□□□ 1.41
HMGN1-219ENST00000491183 MYBBP1AQ9BQG0 1328 aaKnown RBP23.83■■□□□ 1.4
HMGN1-219ENST00000491183 C1QTNF8P60827 252 aa23.82■■□□□ 1.4
HMGN1-219ENST00000491183 DALRD3Q5D0E6 543 aaKnown RBP23.82■■□□□ 1.4
HMGN1-219ENST00000491183 MAPK8IP3Q9UPT6 1336 aa23.82■■□□□ 1.4
HMGN1-219ENST00000491183 NBPF26B4DH59 902 aa23.81■■□□□ 1.4
HMGN1-219ENST00000491183 NBPF10Q6P3W6 841 aaKnown RBP23.81■■□□□ 1.4
HMGN1-219ENST00000491183 DZIP3Q86Y13 1208 aaKnown RBP23.81■■□□□ 1.4
HMGN1-219ENST00000491183 NBPF15Q8N660 670 aa23.81■■□□□ 1.4
HMGN1-219ENST00000491183 KDM3BQ7LBC6 1761 aa23.8■■□□□ 1.4
HMGN1-219ENST00000491183 CARMIL3Q8ND23 1372 aa23.8■■□□□ 1.4
HMGN1-219ENST00000491183 GIGYF1O75420 1035 aaPredicted RBP23.8■■□□□ 1.4
HMGN1-219ENST00000491183 NPM2Q86SE8 214 aaKnown RBP23.8■■□□□ 1.4
HMGN1-219ENST00000491183 PNISRQ8TF01 805 aaKnown RBP23.8■■□□□ 1.4
HMGN1-219ENST00000491183 ZNF526Q8TF50 670 aaPredicted RBP23.78■■□□□ 1.4
HMGN1-219ENST00000491183 BCORQ6W2J9 1755 aa23.78■■□□□ 1.4
HMGN1-219ENST00000491183 RIPK4P57078 832 aa23.77■■□□□ 1.4
HMGN1-219ENST00000491183 EIF4A1P60842 406 aaKnown RBP23.77■■□□□ 1.4
HMGN1-219ENST00000491183 GPBP1L1Q9HC44 474 aaPredicted RBP23.77■■□□□ 1.4
HMGN1-219ENST00000491183 PRR5LQ6MZQ0 368 aa23.76■■□□□ 1.39
HMGN1-219ENST00000491183 CCDC24Q8N4L8 307 aa23.76■■□□□ 1.39
HMGN1-219ENST00000491183 ANKRD31Q8N7Z5 1873 aa23.76■■□□□ 1.39
HMGN1-219ENST00000491183 DLEC1Q9Y238 1755 aa23.75■■□□□ 1.39
HMGN1-219ENST00000491183 TMPOP42166 694 aaKnown RBP23.75■■□□□ 1.39
HMGN1-219ENST00000491183 C2CD5Q86YS7 1000 aa23.75■■□□□ 1.39
HMGN1-219ENST00000491183 SETDB2Q96T68 719 aa23.75■■□□□ 1.39
HMGN1-219ENST00000491183 LAMB4A4D0S4 1761 aa23.74■■□□□ 1.39
HMGN1-219ENST00000491183 PRKRIP1Q9H875 184 aaPredicted RBP23.74■■□□□ 1.39
HMGN1-219ENST00000491183 H0YIN7 160 aa23.73■■□□□ 1.39
HMGN1-219ENST00000491183 CLEC4GQ6UXB4 293 aa23.73■■□□□ 1.39
HMGN1-219ENST00000491183 CCDC146Q8IYE0 955 aa23.73■■□□□ 1.39
HMGN1-219ENST00000491183 BRIP1Q9BX63 1249 aa23.73■■□□□ 1.39
HMGN1-219ENST00000491183 C9orf131Q5VYM1 1079 aa23.71■■□□□ 1.39
HMGN1-219ENST00000491183 TTLL6Q8N841 843 aa23.71■■□□□ 1.39
HMGN1-219ENST00000491183 RRP7AQ9Y3A4 280 aaKnown RBP23.71■■□□□ 1.39
HMGN1-219ENST00000491183 ADAMTS8Q9UP79 889 aa23.7■■□□□ 1.38
HMGN1-219ENST00000491183 SBF1O95248 1867 aa23.69■■□□□ 1.38
HMGN1-219ENST00000491183 PDE6BP35913 854 aa23.69■■□□□ 1.38
HMGN1-219ENST00000491183 HLFQ16534 295 aa23.69■■□□□ 1.38
HMGN1-219ENST00000491183 CNBD1Q8NA66 436 aa23.69■■□□□ 1.38
HMGN1-219ENST00000491183 TSPYL4Q9UJ04 414 aa23.69■■□□□ 1.38
HMGN1-219ENST00000491183 ZNF652Q9Y2D9 606 aa23.69■■□□□ 1.38
HMGN1-219ENST00000491183 RGL2O15211 777 aa23.68■■□□□ 1.38
HMGN1-219ENST00000491183 WDR43Q15061 677 aaKnown RBP eCLIP23.68■■□□□ 1.38
HMGN1-219ENST00000491183 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
HMGN1-219ENST00000491183 NGEFQ8N5V2 710 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms