RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 CRKLP46109 303 aaKnown RBP20.54■□□□□ 0.88
TRA2A-208ENST00000490942 HNRNPUQ00839 825 aaKnown RBP eCLIP20.54■□□□□ 0.888e-8■□□□□ 9
TRA2A-208ENST00000490942 ZNF827Q17R98 1081 aa20.54■□□□□ 0.88
TRA2A-208ENST00000490942 CCDC87Q9NVE4 849 aa20.54■□□□□ 0.88
TRA2A-208ENST00000490942 QSER1Q2KHR3 1735 aa20.53■□□□□ 0.88
TRA2A-208ENST00000490942 SENP3-EIF4A1A0A087X0R7 540 aa20.53■□□□□ 0.88
TRA2A-208ENST00000490942 RPS6KA4O75676 772 aa20.53■□□□□ 0.88
TRA2A-208ENST00000490942 SSFA2P28290 1259 aa20.53■□□□□ 0.88
TRA2A-208ENST00000490942 ZBED9Q6R2W3 1325 aa20.53■□□□□ 0.88
TRA2A-208ENST00000490942 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
TRA2A-208ENST00000490942 INTS5Q6P9B9 1019 aaKnown RBP20.52■□□□□ 0.88
TRA2A-208ENST00000490942 TFCP2L1Q9NZI6 479 aa20.52■□□□□ 0.88
TRA2A-208ENST00000490942 USP16Q9Y5T5 823 aa20.52■□□□□ 0.88
TRA2A-208ENST00000490942 RTCBQ9Y3I0 505 aaKnown RBP20.51■□□□□ 0.87
TRA2A-208ENST00000490942 LAMB4A4D0S4 1761 aa20.51■□□□□ 0.87
TRA2A-208ENST00000490942 GNPATO15228 680 aa20.5■□□□□ 0.87
TRA2A-208ENST00000490942 IL6STP40189 918 aaPredicted RBP20.5■□□□□ 0.87
TRA2A-208ENST00000490942 SLFN5Q08AF3 891 aa20.5■□□□□ 0.87
TRA2A-208ENST00000490942 DUSP27Q5VZP5 1158 aa20.49■□□□□ 0.87
TRA2A-208ENST00000490942 TRMT2AQ8IZ69 625 aaKnown RBP20.49■□□□□ 0.87
TRA2A-208ENST00000490942 TSR2Q969E8 191 aaKnown RBP20.49■□□□□ 0.87
TRA2A-208ENST00000490942 SPINK5Q9NQ38 1064 aaPredicted RBP20.49■□□□□ 0.87
TRA2A-208ENST00000490942 PNPLA7Q6ZV29 1317 aa20.49■□□□□ 0.87
TRA2A-208ENST00000490942 PRAMEF22A3QJZ6 481 aa20.48■□□□□ 0.87
TRA2A-208ENST00000490942 R3HDM1Q15032 1099 aaKnown RBP20.48■□□□□ 0.87
TRA2A-208ENST00000490942 SLC16A10Q8TF71 515 aa20.48■□□□□ 0.87
TRA2A-208ENST00000490942 ZBTB1Q9Y2K1 713 aa20.48■□□□□ 0.87
TRA2A-208ENST00000490942 MYH14Q7Z406 1995 aaKnown RBP20.48■□□□□ 0.87
TRA2A-208ENST00000490942 UBR3Q6ZT12 1888 aa20.47■□□□□ 0.87
TRA2A-208ENST00000490942 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
TRA2A-208ENST00000490942 TRAPPC3LQ5T215 181 aa20.47■□□□□ 0.87
TRA2A-208ENST00000490942 A0A087WZG4 1122 aa20.46■□□□□ 0.87
TRA2A-208ENST00000490942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.46■□□□□ 0.87
TRA2A-208ENST00000490942 RGL2O15211 777 aa20.46■□□□□ 0.87
TRA2A-208ENST00000490942 C8orf58Q8NAV2 365 aa20.46■□□□□ 0.87
TRA2A-208ENST00000490942 A1BGP04217 495 aa20.45■□□□□ 0.86
TRA2A-208ENST00000490942 KRT24Q2M2I5 525 aa20.45■□□□□ 0.86
TRA2A-208ENST00000490942 CT47B1P0C2W7 299 aaPredicted RBP20.44■□□□□ 0.86
TRA2A-208ENST00000490942 TWISTNBQ3B726 338 aaPredicted RBP20.44■□□□□ 0.86
TRA2A-208ENST00000490942 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
TRA2A-208ENST00000490942 NPM2Q86SE8 214 aaKnown RBP20.44■□□□□ 0.86
TRA2A-208ENST00000490942 COL23A1Q86Y22 540 aaPredicted RBP20.44■□□□□ 0.86
TRA2A-208ENST00000490942 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
TRA2A-208ENST00000490942 NBPF26B4DH59 902 aa20.43■□□□□ 0.86
TRA2A-208ENST00000490942 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
TRA2A-208ENST00000490942 NBPF10Q6P3W6 841 aaKnown RBP20.43■□□□□ 0.86
TRA2A-208ENST00000490942 NBPF15Q8N660 670 aa20.43■□□□□ 0.86
TRA2A-208ENST00000490942 DBF4Q9UBU7 674 aaPredicted RBP20.43■□□□□ 0.86
TRA2A-208ENST00000490942 COL15A1P39059 1388 aa20.43■□□□□ 0.86
TRA2A-208ENST00000490942 CASZ1Q86V15 1759 aa20.42■□□□□ 0.86
TRA2A-208ENST00000490942 TUBGCP6Q96RT7 1819 aa20.42■□□□□ 0.86
TRA2A-208ENST00000490942 EXOSC9Q06265 439 aaKnown RBP20.42■□□□□ 0.86
TRA2A-208ENST00000490942 CCDC30Q5VVM6 783 aa20.42■□□□□ 0.86
TRA2A-208ENST00000490942 AMIGO3Q86WK7 504 aa20.42■□□□□ 0.86
TRA2A-208ENST00000490942 ARHGEF1Q92888 912 aaKnown RBP20.42■□□□□ 0.86
TRA2A-208ENST00000490942 CDCA7LQ96GN5 454 aa20.42■□□□□ 0.86
TRA2A-208ENST00000490942 DDX21Q9NR30 783 aaKnown RBP eCLIP20.42■□□□□ 0.86
TRA2A-208ENST00000490942 PSDA5PKW4 1024 aaPredicted RBP20.41■□□□□ 0.86
TRA2A-208ENST00000490942 VAMP4O75379 141 aa20.41■□□□□ 0.86
TRA2A-208ENST00000490942 EIF2S2P20042 333 aaKnown RBP20.41■□□□□ 0.86
TRA2A-208ENST00000490942 RFC4P35249 363 aa20.41■□□□□ 0.86
TRA2A-208ENST00000490942 PDIA6Q15084 440 aa20.41■□□□□ 0.86
TRA2A-208ENST00000490942 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
TRA2A-208ENST00000490942 PHF14O94880 888 aa20.4■□□□□ 0.86
TRA2A-208ENST00000490942 MTFR1LQ9H019 292 aa20.4■□□□□ 0.86
TRA2A-208ENST00000490942 NARFQ9UHQ1 456 aa20.4■□□□□ 0.86
TRA2A-208ENST00000490942 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
TRA2A-208ENST00000490942 ELL2O00472 640 aaPredicted RBP20.39■□□□□ 0.85
TRA2A-208ENST00000490942 LRP10Q7Z4F1 713 aa20.39■□□□□ 0.85
TRA2A-208ENST00000490942 HYPKQ9NX55 129 aa20.39■□□□□ 0.85
TRA2A-208ENST00000490942 ZPR1O75312 459 aa20.37■□□□□ 0.85
TRA2A-208ENST00000490942 NLGN1Q8N2Q7 840 aa20.37■□□□□ 0.85
TRA2A-208ENST00000490942 STK31Q9BXU1 1019 aa20.37■□□□□ 0.85
TRA2A-208ENST00000490942 CHPF2Q9P2E5 772 aa20.37■□□□□ 0.85
TRA2A-208ENST00000490942 C4AP0C0L4 1744 aa20.36■□□□□ 0.85
TRA2A-208ENST00000490942 ERVV-1B6SEH8 477 aa20.35■□□□□ 0.85
TRA2A-208ENST00000490942 CLEC4GQ6UXB4 293 aa20.35■□□□□ 0.85
TRA2A-208ENST00000490942 DZIP3Q86Y13 1208 aaKnown RBP20.35■□□□□ 0.85
TRA2A-208ENST00000490942 PDGFDQ9GZP0 370 aaPredicted RBP20.35■□□□□ 0.85
TRA2A-208ENST00000490942 COL24A1Q17RW2 1714 aa20.34■□□□□ 0.85
TRA2A-208ENST00000490942 GYS1P13807 737 aa20.34■□□□□ 0.85
TRA2A-208ENST00000490942 MYL6BP14649 208 aa20.34■□□□□ 0.85
TRA2A-208ENST00000490942 CAMTA2O94983 1202 aa20.33■□□□□ 0.85
TRA2A-208ENST00000490942 PIP4K2AP48426 406 aaPredicted RBP20.33■□□□□ 0.85
TRA2A-208ENST00000490942 PROSER3Q2NL68 480 aa20.33■□□□□ 0.85
TRA2A-208ENST00000490942 KIF6Q6ZMV9 814 aa20.33■□□□□ 0.85
TRA2A-208ENST00000490942 SPON1Q9HCB6 807 aa20.33■□□□□ 0.85
TRA2A-208ENST00000490942 ZNF652Q9Y2D9 606 aa20.33■□□□□ 0.85
TRA2A-208ENST00000490942 ZNF330Q9Y3S2 320 aaPredicted RBP20.33■□□□□ 0.85
TRA2A-208ENST00000490942 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
TRA2A-208ENST00000490942 SMIM5Q71RC9 77 aa20.32■□□□□ 0.84
TRA2A-208ENST00000490942 NECTIN2Q92692 538 aa20.32■□□□□ 0.84
TRA2A-208ENST00000490942 SCN7AQ01118 1682 aa20.32■□□□□ 0.84
TRA2A-208ENST00000490942 MAP3K15Q6ZN16 1313 aa20.31■□□□□ 0.84
TRA2A-208ENST00000490942 USPL1Q5W0Q7 1092 aa20.31■□□□□ 0.84
TRA2A-208ENST00000490942 COPS6Q7L5N1 327 aa20.31■□□□□ 0.84
TRA2A-208ENST00000490942 TBC1D2BQ9UPU7 963 aa20.31■□□□□ 0.84
TRA2A-208ENST00000490942 CACNA1FO60840 1977 aa20.31■□□□□ 0.84
TRA2A-208ENST00000490942 ZBTB7AO95365 584 aa20.3■□□□□ 0.84
TRA2A-208ENST00000490942 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms