RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 NARFQ9UHQ1 456 aa26.4■■□□□ 1.82
SREBF1-216ENST00000490796 COL15A1P39059 1388 aa26.4■■□□□ 1.82
SREBF1-216ENST00000490796 PRKAR2BP31323 418 aa26.39■■□□□ 1.82
SREBF1-216ENST00000490796 IL17REQ8NFR9 667 aa26.39■■□□□ 1.82
SREBF1-216ENST00000490796 POLRMTO00411 1230 aaKnown RBP26.38■■□□□ 1.81
SREBF1-216ENST00000490796 TM4SF1P30408 202 aa26.38■■□□□ 1.81
SREBF1-216ENST00000490796 DALRD3Q5D0E6 543 aaKnown RBP26.38■■□□□ 1.81
SREBF1-216ENST00000490796 TEX13AQ9BXU3 409 aaPredicted RBP26.38■■□□□ 1.81
SREBF1-216ENST00000490796 ADAMTS7Q9UKP4 1686 aa26.38■■□□□ 1.81
SREBF1-216ENST00000490796 U2AF1L5P0DN76 240 aaPredicted RBP26.37■■□□□ 1.81
SREBF1-216ENST00000490796 U2AF1Q01081 240 aaKnown RBP eCLIP26.37■■□□□ 1.81
SREBF1-216ENST00000490796 ZNF790Q6PG37 636 aa26.37■■□□□ 1.81
SREBF1-216ENST00000490796 NPM2Q86SE8 214 aaKnown RBP26.37■■□□□ 1.81
SREBF1-216ENST00000490796 KIAA1551Q9HCM1 1747 aa26.36■■□□□ 1.81
SREBF1-216ENST00000490796 A0A087WZG4 1122 aa26.36■■□□□ 1.81
SREBF1-216ENST00000490796 KCNA3P22001 575 aa26.35■■□□□ 1.81
SREBF1-216ENST00000490796 ZNF496Q96IT1 587 aaPredicted RBP26.35■■□□□ 1.81
SREBF1-216ENST00000490796 PPP2R1AP30153 589 aa26.34■■□□□ 1.81
SREBF1-216ENST00000490796 CHRNA5P30532 468 aa26.34■■□□□ 1.81
SREBF1-216ENST00000490796 NFIXQ14938 502 aa26.34■■□□□ 1.81
SREBF1-216ENST00000490796 RTF1Q92541 710 aaKnown RBP26.34■■□□□ 1.81
SREBF1-216ENST00000490796 PHACTR3Q96KR7 559 aa26.34■■□□□ 1.81
SREBF1-216ENST00000490796 FMNL2Q96PY5 1086 aa26.34■■□□□ 1.81
SREBF1-216ENST00000490796 RSPH6AQ9H0K4 717 aa26.34■■□□□ 1.81
SREBF1-216ENST00000490796 ZNF330Q9Y3S2 320 aaPredicted RBP26.34■■□□□ 1.81
SREBF1-216ENST00000490796 HEG1Q9ULI3 1381 aa26.33■■□□□ 1.81
SREBF1-216ENST00000490796 BTBD11A6QL63 1104 aa26.32■■□□□ 1.8
SREBF1-216ENST00000490796 SERPINB2P05120 415 aa26.31■■□□□ 1.8
SREBF1-216ENST00000490796 EIF5P55010 431 aaKnown RBP26.3■■□□□ 1.8
SREBF1-216ENST00000490796 BICDL1Q6ZP65 573 aa26.3■■□□□ 1.8
SREBF1-216ENST00000490796 UBR2Q8IWV8 1755 aa26.3■■□□□ 1.8
SREBF1-216ENST00000490796 BCL2L12Q9HB09 334 aa26.29■■□□□ 1.8
SREBF1-216ENST00000490796 NEFMP07197 916 aa26.28■■□□□ 1.8
SREBF1-216ENST00000490796 C9orf131Q5VYM1 1079 aa26.28■■□□□ 1.8
SREBF1-216ENST00000490796 CEMIPQ8WUJ3 1361 aa26.28■■□□□ 1.8
SREBF1-216ENST00000490796 BRCA1P38398 1863 aaKnown RBP26.27■■□□□ 1.8
SREBF1-216ENST00000490796 IL6STP40189 918 aaPredicted RBP26.26■■□□□ 1.79
SREBF1-216ENST00000490796 TBC1D2BQ9UPU7 963 aa26.25■■□□□ 1.79
SREBF1-216ENST00000490796 ARFGEF1Q9Y6D6 1849 aa26.25■■□□□ 1.79
SREBF1-216ENST00000490796 KIF3CO14782 793 aa26.24■■□□□ 1.79
SREBF1-216ENST00000490796 NPHP1O15259 732 aa26.24■■□□□ 1.79
SREBF1-216ENST00000490796 A1BGP04217 495 aa26.24■■□□□ 1.79
SREBF1-216ENST00000490796 MCM10Q7L590 875 aa26.24■■□□□ 1.79
SREBF1-216ENST00000490796 RNF181Q9P0P0 153 aa26.24■■□□□ 1.79
SREBF1-216ENST00000490796 H0YIN7 160 aa26.23■■□□□ 1.79
SREBF1-216ENST00000490796 KCNQ3O43525 872 aa26.23■■□□□ 1.79
SREBF1-216ENST00000490796 HSPA6P17066 643 aa26.23■■□□□ 1.79
SREBF1-216ENST00000490796 C2CD5Q86YS7 1000 aa26.23■■□□□ 1.79
SREBF1-216ENST00000490796 SIPA1L3O60292 1781 aaPredicted RBP26.22■■□□□ 1.79
SREBF1-216ENST00000490796 HTATSF1O43719 755 aaKnown RBP26.21■■□□□ 1.79
SREBF1-216ENST00000490796 TBC1D9BQ66K14 1250 aa26.21■■□□□ 1.79
SREBF1-216ENST00000490796 TTLL6Q8N841 843 aa26.21■■□□□ 1.79
SREBF1-216ENST00000490796 AFDNP55196 1824 aaKnown RBP26.21■■□□□ 1.79
SREBF1-216ENST00000490796 SNRPA1P09661 255 aaKnown RBP26.2■■□□□ 1.78
SREBF1-216ENST00000490796 C16orf71Q8IYS4 520 aaPredicted RBP26.19■■□□□ 1.78
SREBF1-216ENST00000490796 SETDB2Q96T68 719 aa26.19■■□□□ 1.78
SREBF1-216ENST00000490796 KDM2BQ8NHM5 1336 aa26.18■■□□□ 1.78
SREBF1-216ENST00000490796 TOMM70O94826 608 aa26.18■■□□□ 1.78
SREBF1-216ENST00000490796 DCTN1Q14203 1278 aa26.18■■□□□ 1.78
SREBF1-216ENST00000490796 DZIP3Q86Y13 1208 aaKnown RBP26.18■■□□□ 1.78
SREBF1-216ENST00000490796 NMRK2Q9NPI5 230 aa26.18■■□□□ 1.78
SREBF1-216ENST00000490796 PDZRN3Q9UPQ7 1066 aa26.18■■□□□ 1.78
SREBF1-216ENST00000490796 CARMIL3Q8ND23 1372 aa26.18■■□□□ 1.78
SREBF1-216ENST00000490796 PDE6BP35913 854 aa26.17■■□□□ 1.78
SREBF1-216ENST00000490796 USP16Q9Y5T5 823 aa26.17■■□□□ 1.78
SREBF1-216ENST00000490796 NRXN2Q9P2S2 1712 aa26.17■■□□□ 1.78
SREBF1-216ENST00000490796 ZNF622Q969S3 477 aaKnown RBP eCLIP26.16■■□□□ 1.782e-6■□□□□ 11.1
SREBF1-216ENST00000490796 BRIP1Q9BX63 1249 aa26.16■■□□□ 1.78
SREBF1-216ENST00000490796 CEP350Q5VT06 3117 aa26.16■■□□□ 1.78
SREBF1-216ENST00000490796 CAMTA2O94983 1202 aa26.15■■□□□ 1.78
SREBF1-216ENST00000490796 TAF7Q15545 349 aaPredicted RBP26.15■■□□□ 1.78
SREBF1-216ENST00000490796 CNBD1Q8NA66 436 aa26.15■■□□□ 1.78
SREBF1-216ENST00000490796 PIP4K2AP48426 406 aaPredicted RBP26.14■■□□□ 1.78
SREBF1-216ENST00000490796 ST5P78524 1137 aa26.14■■□□□ 1.78
SREBF1-216ENST00000490796 RASSF7Q02833 373 aa26.14■■□□□ 1.78
SREBF1-216ENST00000490796 PRR5LQ6MZQ0 368 aa26.14■■□□□ 1.78
SREBF1-216ENST00000490796 ZNF652Q9Y2D9 606 aa26.14■■□□□ 1.78
SREBF1-216ENST00000490796 LMNB1P20700 586 aa26.13■■□□□ 1.77
SREBF1-216ENST00000490796 CCDC24Q8N4L8 307 aa26.13■■□□□ 1.77
SREBF1-216ENST00000490796 PNNQ9H307 717 aaKnown RBP26.13■■□□□ 1.77
SREBF1-216ENST00000490796 PRAMEF22A3QJZ6 481 aa26.12■■□□□ 1.77
SREBF1-216ENST00000490796 SCN7AQ01118 1682 aa26.12■■□□□ 1.77
SREBF1-216ENST00000490796 PNISRQ8TF01 805 aaKnown RBP26.1■■□□□ 1.77
SREBF1-216ENST00000490796 MAPK8IP3Q9UPT6 1336 aa26.1■■□□□ 1.77
SREBF1-216ENST00000490796 APLP1P51693 650 aa26.09■■□□□ 1.77
SREBF1-216ENST00000490796 CLEC4GQ6UXB4 293 aa26.09■■□□□ 1.77
SREBF1-216ENST00000490796 MIS18AQ9NYP9 233 aa26.09■■□□□ 1.77
SREBF1-216ENST00000490796 ZNF219Q9P2Y4 722 aaPredicted RBP26.09■■□□□ 1.77
SREBF1-216ENST00000490796 ZC3H4Q9UPT8 1303 aaKnown RBP26.09■■□□□ 1.77
SREBF1-216ENST00000490796 NBPF5PQ86XG9 351 aaPredicted RBP26.08■■□□□ 1.77
SREBF1-216ENST00000490796 RBM46Q8TBY0 533 aaKnown RBP26.08■■□□□ 1.77
SREBF1-216ENST00000490796 RRAGCQ9HB90 399 aa26.08■■□□□ 1.77
SREBF1-216ENST00000490796 DLEC1Q9Y238 1755 aa26.07■■□□□ 1.76
SREBF1-216ENST00000490796 C21orf2O43822 256 aa26.06■■□□□ 1.76
SREBF1-216ENST00000490796 NFE2L2Q16236 605 aa26.06■■□□□ 1.76
SREBF1-216ENST00000490796 CNKSR1Q969H4 720 aa26.06■■□□□ 1.76
SREBF1-216ENST00000490796 SBF1O95248 1867 aa26.06■■□□□ 1.76
SREBF1-216ENST00000490796 NIP7Q9Y221 180 aaKnown RBP eCLIP26.04■■□□□ 1.76
SREBF1-216ENST00000490796 NBPF26B4DH59 902 aa26.03■■□□□ 1.76
SREBF1-216ENST00000490796 NFKBIEO00221 500 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms