RNA–Protein interactions for RNA: ENST00000490210.6

ATP9B-204, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 1 (best)

Gene ATP9B, Length 7,353 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-204ENST00000490210 SLC4A2P04920 1241 aa12□□□□□ -0.49
ATP9B-204ENST00000490210 SPECC1Q5M775 1068 aa12□□□□□ -0.49
ATP9B-204ENST00000490210 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
ATP9B-204ENST00000490210 CEP57Q86XR8 500 aa12□□□□□ -0.49
ATP9B-204ENST00000490210 AFAP1Q8N556 730 aa12□□□□□ -0.49
ATP9B-204ENST00000490210 NCOA1Q15788 1441 aa12□□□□□ -0.49
ATP9B-204ENST00000490210 HSF2BPO75031 334 aa11.99□□□□□ -0.49
ATP9B-204ENST00000490210 KIAA1107Q9UPP5 1409 aa11.99□□□□□ -0.49
ATP9B-204ENST00000490210 NCOA2Q15596 1464 aa11.99□□□□□ -0.49
ATP9B-204ENST00000490210 IGHDP01880 384 aa11.99□□□□□ -0.49
ATP9B-204ENST00000490210 CASKIN1Q8WXD9 1431 aa11.99□□□□□ -0.49
ATP9B-204ENST00000490210 SLC3A2P08195 630 aaKnown RBP11.99□□□□□ -0.49
ATP9B-204ENST00000490210 MYCBPQ99417 103 aaPredicted RBP11.99□□□□□ -0.49
ATP9B-204ENST00000490210 TCEAL9Q9UHQ7 104 aa11.99□□□□□ -0.49
ATP9B-204ENST00000490210 CEP131Q9UPN4 1083 aa11.99□□□□□ -0.49
ATP9B-204ENST00000490210 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
ATP9B-204ENST00000490210 WASF1Q92558 559 aa11.99□□□□□ -0.49
ATP9B-204ENST00000490210 CTNNA3Q9UI47 895 aa11.99□□□□□ -0.49
ATP9B-204ENST00000490210 ERBINQ96RT1 1412 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 RAPGEF3O95398 923 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 DMTNQ08495 405 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 SPATA24Q86W54 205 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 CD109Q6YHK3 1445 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 U2AF2P26368 475 aaKnown RBP eCLIP11.98□□□□□ -0.49
ATP9B-204ENST00000490210 PAXIP1Q6ZW49 1069 aaPredicted RBP11.98□□□□□ -0.49
ATP9B-204ENST00000490210 RIC3Q7Z5B4 369 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 TANGO6Q9C0B7 1094 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 VPS18Q9P253 973 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 CCDC43Q96MW1 224 aaKnown RBP11.98□□□□□ -0.49
ATP9B-204ENST00000490210 ZSCAN22P10073 491 aaPredicted RBP11.98□□□□□ -0.49
ATP9B-204ENST00000490210 MSL1Q68DK7 614 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 PAIP2Q9BPZ3 127 aaKnown RBP11.98□□□□□ -0.49
ATP9B-204ENST00000490210 KDM4AO75164 1064 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 HDAC1Q13547 482 aaPredicted RBP11.98□□□□□ -0.49
ATP9B-204ENST00000490210 FSIP1Q8NA03 581 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.98□□□□□ -0.49
ATP9B-204ENST00000490210 KIAA0586Q9BVV6 1533 aa11.98□□□□□ -0.49
ATP9B-204ENST00000490210 CCDC121Q6ZUS5 278 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 ALS2CR12Q96Q35 445 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 GLRX3O76003 335 aaKnown RBP11.97□□□□□ -0.49
ATP9B-204ENST00000490210 POTEDQ86YR6 584 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 CCDC113Q9H0I3 377 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 ZSWIM4Q9H7M6 989 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 ZNF500O60304 480 aaPredicted RBP11.97□□□□□ -0.49
ATP9B-204ENST00000490210 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
ATP9B-204ENST00000490210 ZNF445P59923 1031 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 ABCC11Q96J66 1382 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 SSH1Q8WYL5 1049 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
ATP9B-204ENST00000490210 A6NNZ2 444 aa11.96□□□□□ -0.49
ATP9B-204ENST00000490210 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.49
ATP9B-204ENST00000490210 ANO6Q4KMQ2 910 aa11.96□□□□□ -0.49
ATP9B-204ENST00000490210 CTCFLQ8NI51 663 aaPredicted RBP11.96□□□□□ -0.49
ATP9B-204ENST00000490210 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.49
ATP9B-204ENST00000490210 RIOK3O14730 519 aaKnown RBP11.96□□□□□ -0.49
ATP9B-204ENST00000490210 HDXQ7Z353 690 aa11.96□□□□□ -0.49
ATP9B-204ENST00000490210 ARFGAP2Q8N6H7 521 aa11.96□□□□□ -0.49
ATP9B-204ENST00000490210 GTF3C6Q969F1 213 aa11.96□□□□□ -0.49
ATP9B-204ENST00000490210 NUP88Q99567 741 aaPredicted RBP11.96□□□□□ -0.49
ATP9B-204ENST00000490210 HLTFQ14527 1009 aaKnown RBP eCLIP11.96□□□□□ -0.5
ATP9B-204ENST00000490210 USP48Q86UV5 1035 aa11.96□□□□□ -0.5
ATP9B-204ENST00000490210 BCCIPQ9P287 314 aaKnown RBP eCLIP11.96□□□□□ -0.5
ATP9B-204ENST00000490210 ARAP1Q96P48 1450 aa11.96□□□□□ -0.5
ATP9B-204ENST00000490210 FKBP15Q5T1M5 1219 aa11.96□□□□□ -0.5
ATP9B-204ENST00000490210 MAATS1Q7Z4T9 603 aa11.96□□□□□ -0.5
ATP9B-204ENST00000490210 ATRIPQ8WXE1 791 aa11.96□□□□□ -0.5
ATP9B-204ENST00000490210 RAB11FIP3O75154 756 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 MAP2K2P36507 400 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 B4GALNT4Q76KP1 1039 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 NSRP1Q9H0G5 558 aaKnown RBP11.95□□□□□ -0.5
ATP9B-204ENST00000490210 GJB2P29033 226 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 DNAJC21Q5F1R6 531 aaKnown RBP11.95□□□□□ -0.5
ATP9B-204ENST00000490210 DRC1Q96MC2 740 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 ANKS4BQ8N8V4 417 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 ANKRD30BQ9BXX2 1392 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 PTGS1P23219 599 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 ANAPC15P60006 121 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 NAA25Q14CX7 972 aa11.95□□□□□ -0.5
ATP9B-204ENST00000490210 PRPF40BQ6NWY9 871 aaKnown RBP11.95□□□□□ -0.5
ATP9B-204ENST00000490210 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
ATP9B-204ENST00000490210 HMGB1P09429 215 aaKnown RBP11.94□□□□□ -0.5
ATP9B-204ENST00000490210 C6orf163Q5TEZ5 329 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 CCDC114Q96M63 670 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 ZSCAN16Q9H4T2 348 aaPredicted RBP11.94□□□□□ -0.5
ATP9B-204ENST00000490210 MAP4K4O95819 1239 aaPredicted RBP11.94□□□□□ -0.5
ATP9B-204ENST00000490210 ESCO1Q5FWF5 840 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 LIG1P18858 919 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
ATP9B-204ENST00000490210 BANK1Q8NDB2 785 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 KIF1BPQ96EK5 621 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■■■ 38.5
ATP9B-204ENST00000490210 MAP3K1Q13233 1512 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 CCDC69A6NI79 296 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 KIF5BP33176 963 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 SRGAP3O43295 1099 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 RBSNQ9H1K0 784 aa11.94□□□□□ -0.5
ATP9B-204ENST00000490210 TAOK3Q9H2K8 898 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms