RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 C4AP0C0L4 1744 aa12.77□□□□□ -0.36
CCT3-213ENST00000489870 ZNF790Q6PG37 636 aa12.77□□□□□ -0.37
CCT3-213ENST00000489870 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.37
CCT3-213ENST00000489870 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
CCT3-213ENST00000489870 U2SURPO15042 1029 aaKnown RBP12.76□□□□□ -0.37
CCT3-213ENST00000489870 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
CCT3-213ENST00000489870 IL17REQ8NFR9 667 aa12.76□□□□□ -0.37
CCT3-213ENST00000489870 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
CCT3-213ENST00000489870 CEMIPQ8WUJ3 1361 aa12.76□□□□□ -0.37
CCT3-213ENST00000489870 PXDNLA1KZ92 1463 aa12.76□□□□□ -0.37
CCT3-213ENST00000489870 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
CCT3-213ENST00000489870 A0A0G2JLW4 131 aa12.75□□□□□ -0.37
CCT3-213ENST00000489870 KCNA3P22001 575 aa12.75□□□□□ -0.37
CCT3-213ENST00000489870 IL6STP40189 918 aaPredicted RBP12.75□□□□□ -0.37
CCT3-213ENST00000489870 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
CCT3-213ENST00000489870 TJP1Q07157 1748 aa12.75□□□□□ -0.37
CCT3-213ENST00000489870 FKBP8Q14318 412 aa12.75□□□□□ -0.37
CCT3-213ENST00000489870 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
CCT3-213ENST00000489870 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
CCT3-213ENST00000489870 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
CCT3-213ENST00000489870 POLRMTO00411 1230 aaKnown RBP12.74□□□□□ -0.37
CCT3-213ENST00000489870 DPEP1P16444 411 aa12.74□□□□□ -0.37
CCT3-213ENST00000489870 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
CCT3-213ENST00000489870 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
CCT3-213ENST00000489870 ARFGEF1Q9Y6D6 1849 aa12.74□□□□□ -0.37
CCT3-213ENST00000489870 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
CCT3-213ENST00000489870 HEG1Q9ULI3 1381 aa12.73□□□□□ -0.37
CCT3-213ENST00000489870 ZC3H4Q9UPT8 1303 aaKnown RBP12.73□□□□□ -0.37
CCT3-213ENST00000489870 NEFMP07197 916 aa12.73□□□□□ -0.37
CCT3-213ENST00000489870 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
CCT3-213ENST00000489870 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
CCT3-213ENST00000489870 RTF1Q92541 710 aaKnown RBP12.73□□□□□ -0.37
CCT3-213ENST00000489870 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
CCT3-213ENST00000489870 BRCA1P38398 1863 aaKnown RBP12.73□□□□□ -0.37
CCT3-213ENST00000489870 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
CCT3-213ENST00000489870 COL15A1P39059 1388 aa12.72□□□□□ -0.37
CCT3-213ENST00000489870 KIAA1551Q9HCM1 1747 aa12.72□□□□□ -0.37
CCT3-213ENST00000489870 PPP2R1AP30153 589 aa12.72□□□□□ -0.37
CCT3-213ENST00000489870 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
CCT3-213ENST00000489870 CLEC4GQ6UXB4 293 aa12.72□□□□□ -0.37
CCT3-213ENST00000489870 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
CCT3-213ENST00000489870 SENP3-EIF4A1A0A087X0R7 540 aa12.71□□□□□ -0.37
CCT3-213ENST00000489870 BTBD11A6QL63 1104 aa12.71□□□□□ -0.37
CCT3-213ENST00000489870 PRKAR2BP31323 418 aa12.71□□□□□ -0.37
CCT3-213ENST00000489870 DDR1Q08345 913 aa12.71□□□□□ -0.37
CCT3-213ENST00000489870 NFIXQ14938 502 aa12.71□□□□□ -0.37
CCT3-213ENST00000489870 ZNF496Q96IT1 587 aaPredicted RBP12.71□□□□□ -0.37
CCT3-213ENST00000489870 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
CCT3-213ENST00000489870 SRP68Q9UHB9 627 aaKnown RBP12.71□□□□□ -0.37
CCT3-213ENST00000489870 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.37
CCT3-213ENST00000489870 SERPINB2P05120 415 aa12.7□□□□□ -0.38
CCT3-213ENST00000489870 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
CCT3-213ENST00000489870 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCT3-213ENST00000489870 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
CCT3-213ENST00000489870 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
CCT3-213ENST00000489870 N4BP2Q86UW6 1770 aaPredicted RBP12.7□□□□□ -0.38
CCT3-213ENST00000489870 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
CCT3-213ENST00000489870 NRXN2Q9P2S2 1712 aa12.69□□□□□ -0.38
CCT3-213ENST00000489870 H0YIN7 160 aa12.69□□□□□ -0.38
CCT3-213ENST00000489870 TOMM70O94826 608 aa12.69□□□□□ -0.38
CCT3-213ENST00000489870 SNRPA1P09661 255 aaKnown RBP12.69□□□□□ -0.38
CCT3-213ENST00000489870 PDE6BP35913 854 aa12.69□□□□□ -0.38
CCT3-213ENST00000489870 BRIP1Q9BX63 1249 aa12.69□□□□□ -0.38
CCT3-213ENST00000489870 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
CCT3-213ENST00000489870 KDM2BQ8NHM5 1336 aa12.68□□□□□ -0.38
CCT3-213ENST00000489870 CEP350Q5VT06 3117 aa12.68□□□□□ -0.38
CCT3-213ENST00000489870 CAPN15O75808 1086 aa12.68□□□□□ -0.38
CCT3-213ENST00000489870 HSPA6P17066 643 aa12.68□□□□□ -0.38
CCT3-213ENST00000489870 CANXP27824 592 aaKnown RBP12.68□□□□□ -0.38
CCT3-213ENST00000489870 TAF7Q15545 349 aaPredicted RBP12.68□□□□□ -0.38
CCT3-213ENST00000489870 TTLL6Q8N841 843 aa12.68□□□□□ -0.38
CCT3-213ENST00000489870 KIF3CO14782 793 aa12.67□□□□□ -0.38
CCT3-213ENST00000489870 SETDB2Q96T68 719 aa12.67□□□□□ -0.38
CCT3-213ENST00000489870 RALBP1Q15311 655 aa12.66□□□□□ -0.38
CCT3-213ENST00000489870 BABAM1Q9NWV8 329 aa12.66□□□□□ -0.38
CCT3-213ENST00000489870 ZNF652Q9Y2D9 606 aa12.66□□□□□ -0.38
CCT3-213ENST00000489870 AFDNP55196 1824 aaKnown RBP12.66□□□□□ -0.38
CCT3-213ENST00000489870 LMNB1P20700 586 aa12.65□□□□□ -0.38
CCT3-213ENST00000489870 DSG3P32926 999 aa12.65□□□□□ -0.38
CCT3-213ENST00000489870 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
CCT3-213ENST00000489870 C9orf131Q5VYM1 1079 aa12.65□□□□□ -0.38
CCT3-213ENST00000489870 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
CCT3-213ENST00000489870 SBF1O95248 1867 aa12.65□□□□□ -0.38
CCT3-213ENST00000489870 CARMIL3Q8ND23 1372 aa12.65□□□□□ -0.38
CCT3-213ENST00000489870 APLP1P51693 650 aa12.64□□□□□ -0.39
CCT3-213ENST00000489870 FSTL1Q12841 308 aa12.64□□□□□ -0.39
CCT3-213ENST00000489870 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
CCT3-213ENST00000489870 CAMTA2O94983 1202 aa12.63□□□□□ -0.39
CCT3-213ENST00000489870 A1BGP04217 495 aa12.63□□□□□ -0.39
CCT3-213ENST00000489870 CHRNA5P30532 468 aa12.63□□□□□ -0.39
CCT3-213ENST00000489870 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
CCT3-213ENST00000489870 TPTE2Q6XPS3 522 aa12.63□□□□□ -0.39
CCT3-213ENST00000489870 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
CCT3-213ENST00000489870 C2CD5Q86YS7 1000 aa12.63□□□□□ -0.39
CCT3-213ENST00000489870 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
CCT3-213ENST00000489870 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
CCT3-213ENST00000489870 DLEC1Q9Y238 1755 aa12.62□□□□□ -0.39
CCT3-213ENST00000489870 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
CCT3-213ENST00000489870 ERVV-1B6SEH8 477 aa12.62□□□□□ -0.39
CCT3-213ENST00000489870 ST5P78524 1137 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms