RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 CWF19L2Q2TBE0 894 aaKnown RBP13.06□□□□□ -0.32
ABCD4-214ENST00000489678 TTLL7Q6ZT98 887 aa13.06□□□□□ -0.32
ABCD4-214ENST00000489678 KRT27Q7Z3Y8 459 aa13.06□□□□□ -0.32
ABCD4-214ENST00000489678 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
ABCD4-214ENST00000489678 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
ABCD4-214ENST00000489678 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
ABCD4-214ENST00000489678 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
ABCD4-214ENST00000489678 PI4KAP2A4QPH2 592 aa13.05□□□□□ -0.32
ABCD4-214ENST00000489678 C8orf34Q49A92 452 aa13.05□□□□□ -0.32
ABCD4-214ENST00000489678 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
ABCD4-214ENST00000489678 PI4KAP1Q8N8J0 262 aa13.05□□□□□ -0.32
ABCD4-214ENST00000489678 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
ABCD4-214ENST00000489678 COPS6Q7L5N1 327 aa13.04□□□□□ -0.32
ABCD4-214ENST00000489678 ZBTB1Q9Y2K1 713 aa13.04□□□□□ -0.32
ABCD4-214ENST00000489678 LMO7Q8WWI1 1683 aa13.04□□□□□ -0.32
ABCD4-214ENST00000489678 ITPK1Q13572 414 aa13.04□□□□□ -0.32
ABCD4-214ENST00000489678 XAGE3Q8WTP9 111 aa13.03□□□□□ -0.32
ABCD4-214ENST00000489678 PLCH1Q4KWH8 1693 aa13.03□□□□□ -0.32
ABCD4-214ENST00000489678 EN1Q05925 392 aaPredicted RBP13.03□□□□□ -0.32
ABCD4-214ENST00000489678 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
ABCD4-214ENST00000489678 APBA3O96018 575 aa13.02□□□□□ -0.32
ABCD4-214ENST00000489678 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.32
ABCD4-214ENST00000489678 NBPF26B4DH59 902 aa13.02□□□□□ -0.33
ABCD4-214ENST00000489678 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.33
ABCD4-214ENST00000489678 FLIIQ13045 1269 aa13.02□□□□□ -0.33
ABCD4-214ENST00000489678 NBPF14Q5TI25 921 aa13.02□□□□□ -0.33
ABCD4-214ENST00000489678 NBPF10Q6P3W6 841 aaKnown RBP13.02□□□□□ -0.33
ABCD4-214ENST00000489678 MRPL50Q8N5N7 158 aaKnown RBP13.02□□□□□ -0.33
ABCD4-214ENST00000489678 NBPF15Q8N660 670 aa13.02□□□□□ -0.33
ABCD4-214ENST00000489678 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.33
ABCD4-214ENST00000489678 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.33
ABCD4-214ENST00000489678 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
ABCD4-214ENST00000489678 RBM6P78332 1123 aaKnown RBP13.01□□□□□ -0.33
ABCD4-214ENST00000489678 FAM161AQ3B820 660 aa13.01□□□□□ -0.33
ABCD4-214ENST00000489678 LRRC4BQ9NT99 713 aa13.01□□□□□ -0.33
ABCD4-214ENST00000489678 LOC102724428A0A0B4J2F2 783 aa13□□□□□ -0.33
ABCD4-214ENST00000489678 SIK1P57059 783 aa13□□□□□ -0.33
ABCD4-214ENST00000489678 MSL1Q68DK7 614 aa13□□□□□ -0.33
ABCD4-214ENST00000489678 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
ABCD4-214ENST00000489678 SRP68Q9UHB9 627 aaKnown RBP13□□□□□ -0.33
ABCD4-214ENST00000489678 DEKP35659 375 aaKnown RBP12.99□□□□□ -0.33
ABCD4-214ENST00000489678 NBR1Q14596 966 aa12.99□□□□□ -0.33
ABCD4-214ENST00000489678 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
ABCD4-214ENST00000489678 DZIP1LQ8IYY4 767 aaKnown RBP12.99□□□□□ -0.33
ABCD4-214ENST00000489678 MEIS3Q99687 375 aa12.99□□□□□ -0.33
ABCD4-214ENST00000489678 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
ABCD4-214ENST00000489678 IL16Q14005 1332 aa12.99□□□□□ -0.33
ABCD4-214ENST00000489678 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
ABCD4-214ENST00000489678 RIC3Q7Z5B4 369 aa12.99□□□□□ -0.33
ABCD4-214ENST00000489678 COL14A1Q05707 1796 aaKnown RBP12.99□□□□□ -0.33
ABCD4-214ENST00000489678 CCNL1Q9UK58 526 aaPredicted RBP12.99□□□□□ -0.33
ABCD4-214ENST00000489678 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
ABCD4-214ENST00000489678 SNRPA1P09661 255 aaKnown RBP12.98□□□□□ -0.33
ABCD4-214ENST00000489678 SLC51AQ86UW1 340 aa12.98□□□□□ -0.33
ABCD4-214ENST00000489678 MYD88Q99836 296 aa12.98□□□□□ -0.33
ABCD4-214ENST00000489678 GNPATO15228 680 aa12.98□□□□□ -0.33
ABCD4-214ENST00000489678 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-214ENST00000489678 HLFQ16534 295 aa12.98□□□□□ -0.33
ABCD4-214ENST00000489678 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
ABCD4-214ENST00000489678 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
ABCD4-214ENST00000489678 PALLDQ8WX93 1383 aa12.98□□□□□ -0.33
ABCD4-214ENST00000489678 LINC00116Q8NCU8 138 aa12.97□□□□□ -0.33
ABCD4-214ENST00000489678 KLHDC4Q8TBB5 520 aa12.97□□□□□ -0.33
ABCD4-214ENST00000489678 PKNOX2Q96KN3 472 aa12.97□□□□□ -0.33
ABCD4-214ENST00000489678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
ABCD4-214ENST00000489678 GLI3P10071 1580 aa12.97□□□□□ -0.33
ABCD4-214ENST00000489678 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
ABCD4-214ENST00000489678 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
ABCD4-214ENST00000489678 EZH2Q15910 746 aaKnown RBP12.97□□□□□ -0.33
ABCD4-214ENST00000489678 DISP2A7MBM2 1401 aa12.96□□□□□ -0.33
ABCD4-214ENST00000489678 KCNA4P22459 653 aa12.96□□□□□ -0.33
ABCD4-214ENST00000489678 PDIA6Q15084 440 aa12.96□□□□□ -0.33
ABCD4-214ENST00000489678 ERVV-2B6SEH9 535 aa12.96□□□□□ -0.34
ABCD4-214ENST00000489678 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.34
ABCD4-214ENST00000489678 CRKLP46109 303 aaKnown RBP12.96□□□□□ -0.34
ABCD4-214ENST00000489678 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.34
ABCD4-214ENST00000489678 THRAP3Q9Y2W1 955 aaKnown RBP12.95□□□□□ -0.34
ABCD4-214ENST00000489678 FAM196AQ6ZSG2 479 aa12.95□□□□□ -0.34
ABCD4-214ENST00000489678 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
ABCD4-214ENST00000489678 TNS2Q63HR2 1409 aa12.95□□□□□ -0.34
ABCD4-214ENST00000489678 HTATSF1O43719 755 aaKnown RBP12.94□□□□□ -0.34
ABCD4-214ENST00000489678 AAMPQ13685 434 aa12.94□□□□□ -0.34
ABCD4-214ENST00000489678 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
ABCD4-214ENST00000489678 PROM2Q8N271 834 aa12.94□□□□□ -0.34
ABCD4-214ENST00000489678 COL22A1Q8NFW1 1626 aaPredicted RBP12.94□□□□□ -0.34
ABCD4-214ENST00000489678 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
ABCD4-214ENST00000489678 SIL1Q9H173 461 aa12.94□□□□□ -0.34
ABCD4-214ENST00000489678 RGS12O14924 1447 aa12.93□□□□□ -0.34
ABCD4-214ENST00000489678 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
ABCD4-214ENST00000489678 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
ABCD4-214ENST00000489678 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
ABCD4-214ENST00000489678 NPHP1O15259 732 aa12.93□□□□□ -0.34
ABCD4-214ENST00000489678 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
ABCD4-214ENST00000489678 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
ABCD4-214ENST00000489678 HEG1Q9ULI3 1381 aa12.92□□□□□ -0.34
ABCD4-214ENST00000489678 SLC4A3P48751 1232 aa12.92□□□□□ -0.34
ABCD4-214ENST00000489678 TSHZ3Q63HK5 1081 aa12.92□□□□□ -0.34
ABCD4-214ENST00000489678 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
ABCD4-214ENST00000489678 BCL9O00512 1426 aa12.92□□□□□ -0.34
ABCD4-214ENST00000489678 USP54Q70EL1 1684 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms