RNA–Protein interactions for RNA: ENST00000489559.1

ACAA1-218, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 4

Gene ACAA1, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-218ENST00000489559 NLGN2Q8NFZ4 835 aa29.48■■■□□ 2.31
ACAA1-218ENST00000489559 CD2APQ9Y5K6 639 aa29.48■■■□□ 2.31
ACAA1-218ENST00000489559 KDM3BQ7LBC6 1761 aa29.47■■■□□ 2.31
ACAA1-218ENST00000489559 SRP68Q9UHB9 627 aaKnown RBP29.46■■■□□ 2.31
ACAA1-218ENST00000489559 COL15A1P39059 1388 aa29.46■■■□□ 2.31
ACAA1-218ENST00000489559 CANXP27824 592 aaKnown RBP29.44■■■□□ 2.3
ACAA1-218ENST00000489559 RIPK4P57078 832 aa29.43■■■□□ 2.3
ACAA1-218ENST00000489559 CCDC146Q8IYE0 955 aa29.43■■■□□ 2.3
ACAA1-218ENST00000489559 PNISRQ8TF01 805 aaKnown RBP29.43■■■□□ 2.3
ACAA1-218ENST00000489559 THUMPD2Q9BTF0 503 aaKnown RBP29.43■■■□□ 2.3
ACAA1-218ENST00000489559 ZPR1O75312 459 aa29.42■■■□□ 2.3
ACAA1-218ENST00000489559 TMPOP42166 694 aaKnown RBP29.42■■■□□ 2.3
ACAA1-218ENST00000489559 RUNDC1Q96C34 613 aa29.42■■■□□ 2.3
ACAA1-218ENST00000489559 ADAMTS8Q9UP79 889 aa29.42■■■□□ 2.3
ACAA1-218ENST00000489559 KIF13BQ9NQT8 1826 aa29.42■■■□□ 2.3
ACAA1-218ENST00000489559 SNRPA1P09661 255 aaKnown RBP29.4■■■□□ 2.3
ACAA1-218ENST00000489559 EIF5P55010 431 aaKnown RBP29.4■■■□□ 2.3
ACAA1-218ENST00000489559 LMOD3Q0VAK6 560 aa29.4■■■□□ 2.3
ACAA1-218ENST00000489559 FKBP8Q14318 412 aa29.4■■■□□ 2.3
ACAA1-218ENST00000489559 USPL1Q5W0Q7 1092 aa29.4■■■□□ 2.3
ACAA1-218ENST00000489559 MIS18AQ9NYP9 233 aa29.4■■■□□ 2.3
ACAA1-218ENST00000489559 NARFQ9UHQ1 456 aa29.4■■■□□ 2.3
ACAA1-218ENST00000489559 LAMB4A4D0S4 1761 aa29.39■■■□□ 2.3
ACAA1-218ENST00000489559 GPR162Q16538 588 aa29.39■■■□□ 2.3
ACAA1-218ENST00000489559 PARP3Q9Y6F1 533 aa29.39■■■□□ 2.3
ACAA1-218ENST00000489559 USP16Q9Y5T5 823 aa29.38■■■□□ 2.29
ACAA1-218ENST00000489559 A0A087WZG4 1122 aa29.37■■■□□ 2.29
ACAA1-218ENST00000489559 PRAMEF22A3QJZ6 481 aa29.37■■■□□ 2.29
ACAA1-218ENST00000489559 A1BGP04217 495 aa29.37■■■□□ 2.29
ACAA1-218ENST00000489559 IL6STP40189 918 aaPredicted RBP29.37■■■□□ 2.29
ACAA1-218ENST00000489559 PELP1Q8IZL8 1130 aaKnown RBP29.36■■■□□ 2.29
ACAA1-218ENST00000489559 RRP7AQ9Y3A4 280 aaKnown RBP29.36■■■□□ 2.29
ACAA1-218ENST00000489559 SCN7AQ01118 1682 aa29.35■■■□□ 2.29
ACAA1-218ENST00000489559 CHD4Q14839 1912 aa29.35■■■□□ 2.29
ACAA1-218ENST00000489559 C10orf71Q711Q0 1435 aa29.35■■■□□ 2.29
ACAA1-218ENST00000489559 ZNF330Q9Y3S2 320 aaPredicted RBP29.34■■■□□ 2.29
ACAA1-218ENST00000489559 TM4SF1P30408 202 aa29.33■■■□□ 2.29
ACAA1-218ENST00000489559 NEUROD2Q15784 382 aa29.33■■■□□ 2.29
ACAA1-218ENST00000489559 KIAA1551Q9HCM1 1747 aa29.33■■■□□ 2.29
ACAA1-218ENST00000489559 ANP32CO43423 234 aa29.32■■■□□ 2.28
ACAA1-218ENST00000489559 DDR1Q08345 913 aa29.32■■■□□ 2.28
ACAA1-218ENST00000489559 NPM2Q86SE8 214 aaKnown RBP29.32■■■□□ 2.28
ACAA1-218ENST00000489559 BCL2L12Q9HB09 334 aa29.32■■■□□ 2.28
ACAA1-218ENST00000489559 EIF4A1P60842 406 aaKnown RBP29.31■■■□□ 2.28
ACAA1-218ENST00000489559 N4BP2Q86UW6 1770 aaPredicted RBP29.31■■■□□ 2.28
ACAA1-218ENST00000489559 AFDNP55196 1824 aaKnown RBP29.3■■■□□ 2.28
ACAA1-218ENST00000489559 YY1P25490 414 aa29.3■■■□□ 2.28
ACAA1-218ENST00000489559 BCORQ6W2J9 1755 aa29.3■■■□□ 2.28
ACAA1-218ENST00000489559 POLRMTO00411 1230 aaKnown RBP29.29■■■□□ 2.28
ACAA1-218ENST00000489559 YBX3P16989 372 aaKnown RBP eCLIP29.29■■■□□ 2.28
ACAA1-218ENST00000489559 BABAM1Q9NWV8 329 aa29.29■■■□□ 2.28
ACAA1-218ENST00000489559 TSPYL4Q9UJ04 414 aa29.29■■■□□ 2.28
ACAA1-218ENST00000489559 PXDNLA1KZ92 1463 aa29.29■■■□□ 2.28
ACAA1-218ENST00000489559 GIGYF1O75420 1035 aaPredicted RBP29.28■■■□□ 2.28
ACAA1-218ENST00000489559 TGFB2P61812 414 aa29.28■■■□□ 2.28
ACAA1-218ENST00000489559 NFIXQ14938 502 aa29.28■■■□□ 2.28
ACAA1-218ENST00000489559 CCDC184Q52MB2 194 aa29.28■■■□□ 2.28
ACAA1-218ENST00000489559 TRIM35Q9UPQ4 493 aa29.28■■■□□ 2.28
ACAA1-218ENST00000489559 TBC1D2BQ9UPU7 963 aa29.28■■■□□ 2.28
ACAA1-218ENST00000489559 NRXN2Q9P2S2 1712 aa29.28■■■□□ 2.28
ACAA1-218ENST00000489559 PIP4K2AP48426 406 aaPredicted RBP29.27■■■□□ 2.28
ACAA1-218ENST00000489559 GRIN3BO60391 1043 aa29.26■■■□□ 2.27
ACAA1-218ENST00000489559 DZIP3Q86Y13 1208 aaKnown RBP29.25■■■□□ 2.27
ACAA1-218ENST00000489559 NBPF26B4DH59 902 aa29.24■■■□□ 2.27
ACAA1-218ENST00000489559 NBPF10Q6P3W6 841 aaKnown RBP29.24■■■□□ 2.27
ACAA1-218ENST00000489559 NBPF15Q8N660 670 aa29.24■■■□□ 2.27
ACAA1-218ENST00000489559 CAMTA2O94983 1202 aa29.23■■■□□ 2.27
ACAA1-218ENST00000489559 BRCA1P38398 1863 aaKnown RBP29.23■■■□□ 2.27
ACAA1-218ENST00000489559 APAF1O14727 1248 aa29.22■■■□□ 2.27
ACAA1-218ENST00000489559 BICDL1Q6ZP65 573 aa29.21■■■□□ 2.27
ACAA1-218ENST00000489559 A0A0G2JLW4 131 aa29.2■■■□□ 2.26
ACAA1-218ENST00000489559 SERPINB2P05120 415 aa29.2■■■□□ 2.26
ACAA1-218ENST00000489559 TBC1D9BQ66K14 1250 aa29.2■■■□□ 2.26
ACAA1-218ENST00000489559 MRS2Q9HD23 443 aa29.2■■■□□ 2.26
ACAA1-218ENST00000489559 WWC3Q9ULE0 1092 aa29.2■■■□□ 2.26
ACAA1-218ENST00000489559 CHL1O00533 1208 aa29.19■■■□□ 2.26
ACAA1-218ENST00000489559 DPEP1P16444 411 aa29.19■■■□□ 2.26
ACAA1-218ENST00000489559 LAS1LQ9Y4W2 734 aaKnown RBP29.17■■■□□ 2.26
ACAA1-218ENST00000489559 CARMIL3Q8ND23 1372 aa29.16■■■□□ 2.26
ACAA1-218ENST00000489559 CLEC4GQ6UXB4 293 aa29.16■■■□□ 2.26
ACAA1-218ENST00000489559 ERBB4Q15303 1308 aa29.16■■■□□ 2.26
ACAA1-218ENST00000489559 ZNF652Q9Y2D9 606 aa29.15■■■□□ 2.26
ACAA1-218ENST00000489559 RGL2O15211 777 aa29.14■■■□□ 2.26
ACAA1-218ENST00000489559 SETDB2Q96T68 719 aa29.14■■■□□ 2.26
ACAA1-218ENST00000489559 KCNA3P22001 575 aa29.13■■■□□ 2.25
ACAA1-218ENST00000489559 CFAP44Q96MT7 982 aa29.13■■■□□ 2.25
ACAA1-218ENST00000489559 DLEC1Q9Y238 1755 aa29.13■■■□□ 2.25
ACAA1-218ENST00000489559 ARFGEF1Q9Y6D6 1849 aa29.13■■■□□ 2.25
ACAA1-218ENST00000489559 BCS1LQ9Y276 419 aa29.12■■■□□ 2.25
ACAA1-218ENST00000489559 ANKRD31Q8N7Z5 1873 aa29.12■■■□□ 2.25
ACAA1-218ENST00000489559 MYL6BP14649 208 aa29.11■■■□□ 2.25
ACAA1-218ENST00000489559 CALD1Q05682 793 aaKnown RBP29.11■■■□□ 2.25
ACAA1-218ENST00000489559 NGEFQ8N5V2 710 aa29.11■■■□□ 2.25
ACAA1-218ENST00000489559 PIM2Q9P1W9 311 aa29.11■■■□□ 2.25
ACAA1-218ENST00000489559 NUP98P52948 1817 aa29.1■■■□□ 2.25
ACAA1-218ENST00000489559 EIF2S2P20042 333 aaKnown RBP29.1■■■□□ 2.25
ACAA1-218ENST00000489559 CHRNA5P30532 468 aa29.1■■■□□ 2.25
ACAA1-218ENST00000489559 GOLGB1Q14789 3259 aaKnown RBP29.09■■■□□ 2.25
ACAA1-218ENST00000489559 UTRNP46939 3433 aa29.09■■■□□ 2.25
ACAA1-218ENST00000489559 KRT24Q2M2I5 525 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms