RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 USP17L19D6RCP7 530 aa5.29□□□□□ -1.56
CALD1-221ENST00000489019 USP17L20D6RJB6 530 aa5.29□□□□□ -1.56
CALD1-221ENST00000489019 RFX1P22670 979 aa5.29□□□□□ -1.56
CALD1-221ENST00000489019 USP17L24Q0WX57 530 aa5.29□□□□□ -1.56
CALD1-221ENST00000489019 SH3PXD2AQ5TCZ1 1133 aa5.29□□□□□ -1.56
CALD1-221ENST00000489019 SLC9A9Q8IVB4 645 aa5.29□□□□□ -1.56
CALD1-221ENST00000489019 ZSCAN1Q8NBB4 408 aa5.29□□□□□ -1.56
CALD1-221ENST00000489019 AIDAQ96BJ3 306 aa5.29□□□□□ -1.56
CALD1-221ENST00000489019 NUCKS1Q9H1E3 243 aaKnown RBP5.29□□□□□ -1.56
CALD1-221ENST00000489019 TSPAN10Q9H1Z9 355 aaPredicted RBP5.29□□□□□ -1.56
CALD1-221ENST00000489019 VRTNQ9H8Y1 702 aa5.29□□□□□ -1.56
CALD1-221ENST00000489019 FAM196BA6NMK8 535 aa5.28□□□□□ -1.56
CALD1-221ENST00000489019 M0R2N6 131 aa5.28□□□□□ -1.56
CALD1-221ENST00000489019 TXLNAP40222 546 aa5.28□□□□□ -1.56
CALD1-221ENST00000489019 CDCA8Q53HL2 280 aa5.28□□□□□ -1.56
CALD1-221ENST00000489019 ARXQ96QS3 562 aa5.28□□□□□ -1.56
CALD1-221ENST00000489019 CRISPLD1Q9H336 500 aa5.28□□□□□ -1.56
CALD1-221ENST00000489019 C21orf2O43822 256 aa5.27□□□□□ -1.57
CALD1-221ENST00000489019 LGR5O75473 907 aa5.27□□□□□ -1.57
CALD1-221ENST00000489019 SLURP2P0DP57 97 aa5.27□□□□□ -1.57
CALD1-221ENST00000489019 NOS2P35228 1153 aa5.27□□□□□ -1.57
CALD1-221ENST00000489019 SEC13P55735 322 aa5.27□□□□□ -1.57
CALD1-221ENST00000489019 SRPK2P78362 688 aaKnown RBP5.27□□□□□ -1.57
CALD1-221ENST00000489019 DPYDQ12882 1025 aa5.27□□□□□ -1.57
CALD1-221ENST00000489019 TEAD4Q15561 434 aa5.27□□□□□ -1.57
CALD1-221ENST00000489019 LARP1Q6PKG0 1096 aaKnown RBP5.27□□□□□ -1.57
CALD1-221ENST00000489019 L3MBTL2Q969R5 705 aa5.27□□□□□ -1.57
CALD1-221ENST00000489019 KLRG1Q96E93 195 aa5.27□□□□□ -1.57
CALD1-221ENST00000489019 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.26□□□□□ -1.57
CALD1-221ENST00000489019 EML1O00423 815 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 CSB-PGBD3P0DP91 1061 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 LBRQ14739 615 aaKnown RBP5.26□□□□□ -1.57
CALD1-221ENST00000489019 POTEAQ6S8J7 498 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 ANKMY2Q8IV38 441 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 PGBD3Q8N328 593 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 C1orf216Q8TAB5 229 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 WHAMMQ8TF30 809 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 C7orf43Q8WVR3 580 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 C1orf115Q9H7X2 142 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 MBIPQ9NS73 344 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 NDFIP2Q9NV92 336 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 ZDHHC3Q9NYG2 299 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 STK17AQ9UEE5 414 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 HCN2Q9UL51 889 aa5.26□□□□□ -1.57
CALD1-221ENST00000489019 A0A1W2PNR3 127 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 BNIP3LO60238 219 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 ADAMTS2O95450 1211 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 SRSF11Q05519 484 aaKnown RBP5.25□□□□□ -1.57
CALD1-221ENST00000489019 NBPF1Q3BBV0 1214 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 FOXR1Q6PIV2 292 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 C14orf37Q86TY3 774 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 GAS2L2Q8NHY3 880 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 TRERF1Q96PN7 1200 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 ZIC5Q96T25 663 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 ZNF232Q9UNY5 417 aa5.25□□□□□ -1.57
CALD1-221ENST00000489019 RBM19Q9Y4C8 960 aaKnown RBP5.25□□□□□ -1.57
CALD1-221ENST00000489019 SERTM1A2A2V5 107 aa5.24□□□□□ -1.57
CALD1-221ENST00000489019 PSMA6P60900 246 aaKnown RBP5.24□□□□□ -1.57
CALD1-221ENST00000489019 ARSJQ5FYB0 599 aaPredicted RBP5.24□□□□□ -1.57
CALD1-221ENST00000489019 EFHC2Q5JST6 749 aa5.24□□□□□ -1.57
CALD1-221ENST00000489019 ZNF385CQ66K41 422 aaPredicted RBP5.24□□□□□ -1.57
CALD1-221ENST00000489019 SCG3Q8WXD2 468 aaKnown RBP5.24□□□□□ -1.57
CALD1-221ENST00000489019 ABHD17AQ96GS6 310 aa5.24□□□□□ -1.57
CALD1-221ENST00000489019 CFHR5Q9BXR6 569 aa5.24□□□□□ -1.57
CALD1-221ENST00000489019 ZCCHC2Q9C0B9 1178 aaKnown RBP5.24□□□□□ -1.57
CALD1-221ENST00000489019 ZMIZ1Q9ULJ6 1067 aa5.24□□□□□ -1.57
CALD1-221ENST00000489019 IGF1RP08069 1367 aa5.24□□□□□ -1.57
CALD1-221ENST00000489019 ATAD2Q6PL18 1390 aa5.24□□□□□ -1.57
CALD1-221ENST00000489019 TATP17735 454 aaPredicted RBP5.23□□□□□ -1.57
CALD1-221ENST00000489019 MX2P20592 715 aa5.23□□□□□ -1.57
CALD1-221ENST00000489019 HIRAP54198 1017 aaPredicted RBP5.23□□□□□ -1.57
CALD1-221ENST00000489019 LYPD4Q6UWN0 246 aa5.23□□□□□ -1.57
CALD1-221ENST00000489019 NLRP8Q86W28 1048 aa5.23□□□□□ -1.57
CALD1-221ENST00000489019 HINFPQ9BQA5 517 aa5.23□□□□□ -1.57
CALD1-221ENST00000489019 C2orf49Q9BVC5 232 aaPredicted RBP5.23□□□□□ -1.57
CALD1-221ENST00000489019 NOVA2Q9UNW9 492 aaKnown RBP5.23□□□□□ -1.57
CALD1-221ENST00000489019 HCN4Q9Y3Q4 1203 aa5.23□□□□□ -1.57
CALD1-221ENST00000489019 C2CD2LO14523 706 aa5.22□□□□□ -1.57
CALD1-221ENST00000489019 PPP1R12BO60237 982 aaPredicted RBP5.22□□□□□ -1.57
CALD1-221ENST00000489019 CTBSQ01459 385 aa5.22□□□□□ -1.57
CALD1-221ENST00000489019 BICDL1Q6ZP65 573 aa5.22□□□□□ -1.57
CALD1-221ENST00000489019 STAG2Q8N3U4 1231 aa5.22□□□□□ -1.57
CALD1-221ENST00000489019 CCDC82Q8N4S0 544 aa5.22□□□□□ -1.57
CALD1-221ENST00000489019 FAM200AQ8TCP9 573 aa5.22□□□□□ -1.57
CALD1-221ENST00000489019 CHMP7Q8WUX9 453 aaPredicted RBP5.22□□□□□ -1.57
CALD1-221ENST00000489019 PHACTR1Q9C0D0 580 aa5.22□□□□□ -1.57
CALD1-221ENST00000489019 SERPINA10Q9UK55 444 aa5.22□□□□□ -1.57
CALD1-221ENST00000489019 ATXN7L1Q9ULK2 861 aaPredicted RBP5.22□□□□□ -1.57
CALD1-221ENST00000489019 PCDHGC4Q9Y5F7 938 aa5.22□□□□□ -1.57
CALD1-221ENST00000489019 DCDC2BA2VCK2 349 aa5.21□□□□□ -1.58
CALD1-221ENST00000489019 ATXN7O15265 892 aaPredicted RBP5.21□□□□□ -1.58
CALD1-221ENST00000489019 CELA2BP08218 269 aaPredicted RBP5.21□□□□□ -1.58
CALD1-221ENST00000489019 MAPTP10636 758 aaKnown RBP5.21□□□□□ -1.58
CALD1-221ENST00000489019 FGFR3P22607 806 aa5.21□□□□□ -1.58
CALD1-221ENST00000489019 WEE1P30291 646 aa5.21□□□□□ -1.58
CALD1-221ENST00000489019 TNP2Q05952 138 aa5.21□□□□□ -1.58
CALD1-221ENST00000489019 FAM69CQ0P6D2 419 aa5.21□□□□□ -1.58
CALD1-221ENST00000489019 ELOAQ14241 798 aaKnown RBP5.21□□□□□ -1.58
CALD1-221ENST00000489019 FIGNL1Q6PIW4 674 aa5.21□□□□□ -1.58
CALD1-221ENST00000489019 LRRC69Q6ZNQ3 347 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms