RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 TAF7Q15545 349 aaPredicted RBP16.25■□□□□ 0.19
NELFE-209ENST00000488426 BCL11AQ9H165 835 aa16.25■□□□□ 0.19
NELFE-209ENST00000488426 ASAP1Q9ULH1 1129 aa16.25■□□□□ 0.19
NELFE-209ENST00000488426 AMIGO3Q86WK7 504 aa16.25■□□□□ 0.19
NELFE-209ENST00000488426 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
NELFE-209ENST00000488426 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
NELFE-209ENST00000488426 KDM3BQ7LBC6 1761 aa16.24■□□□□ 0.19
NELFE-209ENST00000488426 SOS1Q07889 1333 aaPredicted RBP16.24■□□□□ 0.19
NELFE-209ENST00000488426 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
NELFE-209ENST00000488426 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
NELFE-209ENST00000488426 MRPL50Q8N5N7 158 aaKnown RBP16.23■□□□□ 0.19
NELFE-209ENST00000488426 PANK1Q8TE04 598 aa16.23■□□□□ 0.19
NELFE-209ENST00000488426 TFCP2L1Q9NZI6 479 aa16.23■□□□□ 0.19
NELFE-209ENST00000488426 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
NELFE-209ENST00000488426 ELL2O00472 640 aaPredicted RBP16.22■□□□□ 0.19
NELFE-209ENST00000488426 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
NELFE-209ENST00000488426 ARHGAP45Q92619 1136 aa16.22■□□□□ 0.19
NELFE-209ENST00000488426 MTFR1LQ9H019 292 aa16.22■□□□□ 0.19
NELFE-209ENST00000488426 NOB1Q9ULX3 412 aaKnown RBP16.22■□□□□ 0.19
NELFE-209ENST00000488426 SCN11AQ9UI33 1791 aa16.22■□□□□ 0.19
NELFE-209ENST00000488426 TUBGCP6Q96RT7 1819 aa16.22■□□□□ 0.19
NELFE-209ENST00000488426 TRIM27P14373 513 aa16.22■□□□□ 0.19
NELFE-209ENST00000488426 FTSJ3Q8IY81 847 aaKnown RBP16.22■□□□□ 0.19
NELFE-209ENST00000488426 RNMTO43148 476 aaKnown RBP16.21■□□□□ 0.19
NELFE-209ENST00000488426 RLBP1P12271 317 aa16.21■□□□□ 0.19
NELFE-209ENST00000488426 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
NELFE-209ENST00000488426 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
NELFE-209ENST00000488426 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
NELFE-209ENST00000488426 COG6Q9Y2V7 657 aa16.21■□□□□ 0.19
NELFE-209ENST00000488426 KDM6AO15550 1401 aaPredicted RBP16.21■□□□□ 0.19
NELFE-209ENST00000488426 TEFQ10587 303 aa16.2■□□□□ 0.18
NELFE-209ENST00000488426 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
NELFE-209ENST00000488426 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
NELFE-209ENST00000488426 ITPK1Q13572 414 aa16.2■□□□□ 0.18
NELFE-209ENST00000488426 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
NELFE-209ENST00000488426 MVPQ14764 893 aaKnown RBP16.19■□□□□ 0.18
NELFE-209ENST00000488426 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
NELFE-209ENST00000488426 TNNQ9UQP3 1299 aa16.19■□□□□ 0.18
NELFE-209ENST00000488426 LOC102724428A0A0B4J2F2 783 aa16.18■□□□□ 0.18
NELFE-209ENST00000488426 SIK1P57059 783 aa16.18■□□□□ 0.18
NELFE-209ENST00000488426 LINC00116Q8NCU8 138 aa16.18■□□□□ 0.18
NELFE-209ENST00000488426 CLUAP1Q96AJ1 413 aa16.18■□□□□ 0.18
NELFE-209ENST00000488426 CACNA1FO60840 1977 aa16.18■□□□□ 0.18
NELFE-209ENST00000488426 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
NELFE-209ENST00000488426 DCAF5Q96JK2 942 aa16.18■□□□□ 0.18
NELFE-209ENST00000488426 FHDC1Q9C0D6 1143 aaPredicted RBP16.18■□□□□ 0.18
NELFE-209ENST00000488426 TAF1LQ8IZX4 1826 aa16.17■□□□□ 0.18
NELFE-209ENST00000488426 HSP90AB1P08238 724 aaKnown RBP16.17■□□□□ 0.18
NELFE-209ENST00000488426 NFATC2IPQ8NCF5 419 aa16.17■□□□□ 0.18
NELFE-209ENST00000488426 MRC1P22897 1456 aa16.17■□□□□ 0.18
NELFE-209ENST00000488426 ERVV-2B6SEH9 535 aa16.16■□□□□ 0.18
NELFE-209ENST00000488426 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
NELFE-209ENST00000488426 API5Q9BZZ5 524 aaKnown RBP16.16■□□□□ 0.18
NELFE-209ENST00000488426 MSH5O43196 834 aa16.16■□□□□ 0.18
NELFE-209ENST00000488426 MSL1Q68DK7 614 aa16.16■□□□□ 0.18
NELFE-209ENST00000488426 DDX19BQ9UMR2 479 aa16.16■□□□□ 0.18
NELFE-209ENST00000488426 C5P01031 1676 aa16.15■□□□□ 0.18
NELFE-209ENST00000488426 BTBD11A6QL63 1104 aa16.15■□□□□ 0.18
NELFE-209ENST00000488426 HOXB7P09629 217 aa16.15■□□□□ 0.18
NELFE-209ENST00000488426 ATP6V1AP38606 617 aa16.15■□□□□ 0.18
NELFE-209ENST00000488426 CABP4P57796 275 aa16.15■□□□□ 0.18
NELFE-209ENST00000488426 ARXQ96QS3 562 aa16.15■□□□□ 0.18
NELFE-209ENST00000488426 CHMP4AQ9BY43 222 aa16.15■□□□□ 0.18
NELFE-209ENST00000488426 CENPQQ7L2Z9 268 aaPredicted RBP16.14■□□□□ 0.17
NELFE-209ENST00000488426 ABCC4O15439 1325 aa16.14■□□□□ 0.17
NELFE-209ENST00000488426 PTPRCP08575 1304 aa16.14■□□□□ 0.17
NELFE-209ENST00000488426 KDM2BQ8NHM5 1336 aa16.14■□□□□ 0.17
NELFE-209ENST00000488426 QSER1Q2KHR3 1735 aa16.14■□□□□ 0.17
NELFE-209ENST00000488426 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
NELFE-209ENST00000488426 PHF14O94880 888 aa16.14■□□□□ 0.17
NELFE-209ENST00000488426 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
NELFE-209ENST00000488426 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.17
NELFE-209ENST00000488426 TMEM57Q8N5G2 664 aa16.14■□□□□ 0.17
NELFE-209ENST00000488426 SLC16A10Q8TF71 515 aa16.14■□□□□ 0.17
NELFE-209ENST00000488426 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
NELFE-209ENST00000488426 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
NELFE-209ENST00000488426 C4BP0C0L5 1744 aa16.13■□□□□ 0.17
NELFE-209ENST00000488426 STK31Q9BXU1 1019 aa16.12■□□□□ 0.17
NELFE-209ENST00000488426 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
NELFE-209ENST00000488426 SLC52A2Q9HAB3 445 aa16.12■□□□□ 0.17
NELFE-209ENST00000488426 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
NELFE-209ENST00000488426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
NELFE-209ENST00000488426 AK7Q96M32 723 aa16.11■□□□□ 0.17
NELFE-209ENST00000488426 HEG1Q9ULI3 1381 aa16.1■□□□□ 0.17
NELFE-209ENST00000488426 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
NELFE-209ENST00000488426 SLC39A6Q13433 755 aa16.1■□□□□ 0.17
NELFE-209ENST00000488426 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
NELFE-209ENST00000488426 UBR3Q6ZT12 1888 aa16.09■□□□□ 0.17
NELFE-209ENST00000488426 GNPATO15228 680 aa16.09■□□□□ 0.17
NELFE-209ENST00000488426 COL24A1Q17RW2 1714 aa16.09■□□□□ 0.17
NELFE-209ENST00000488426 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.17
NELFE-209ENST00000488426 NLGN2Q8NFZ4 835 aa16.08■□□□□ 0.17
NELFE-209ENST00000488426 KCNQ3O43525 872 aa16.08■□□□□ 0.16
NELFE-209ENST00000488426 ZBTB40Q9NUA8 1239 aa16.08■□□□□ 0.16
NELFE-209ENST00000488426 MYH14Q7Z406 1995 aaKnown RBP16.07■□□□□ 0.16
NELFE-209ENST00000488426 N4BP2Q86UW6 1770 aaPredicted RBP16.07■□□□□ 0.16
NELFE-209ENST00000488426 POLD1P28340 1107 aa16.07■□□□□ 0.16
NELFE-209ENST00000488426 INTS3Q68E01 1043 aaKnown RBP16.07■□□□□ 0.16
NELFE-209ENST00000488426 PCDHB15Q9Y5E8 787 aa16.07■□□□□ 0.16
NELFE-209ENST00000488426 ZNF790Q6PG37 636 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms