RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CYP19A1P11511 503 aaPredicted RBP14.4□□□□□ -0.1
UBE4B-210ENST00000488228 GNAI1P63096 354 aa14.4□□□□□ -0.1
UBE4B-210ENST00000488228 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
UBE4B-210ENST00000488228 CCDC87Q9NVE4 849 aa14.4□□□□□ -0.1
UBE4B-210ENST00000488228 BABAM1Q9NWV8 329 aa14.4□□□□□ -0.1
UBE4B-210ENST00000488228 ZBTB1Q9Y2K1 713 aa14.4□□□□□ -0.1
UBE4B-210ENST00000488228 LRP5O75197 1615 aa14.4□□□□□ -0.1
UBE4B-210ENST00000488228 SNRPA1P09661 255 aaKnown RBP14.39□□□□□ -0.11
UBE4B-210ENST00000488228 IL16Q14005 1332 aa14.39□□□□□ -0.11
UBE4B-210ENST00000488228 FANCIQ9NVI1 1328 aa14.39□□□□□ -0.11
UBE4B-210ENST00000488228 GIGYF1O75420 1035 aaPredicted RBP14.38□□□□□ -0.11
UBE4B-210ENST00000488228 PIP4K2AP48426 406 aaPredicted RBP14.38□□□□□ -0.11
UBE4B-210ENST00000488228 INTS5Q6P9B9 1019 aaKnown RBP14.38□□□□□ -0.11
UBE4B-210ENST00000488228 NGEFQ8N5V2 710 aa14.38□□□□□ -0.11
UBE4B-210ENST00000488228 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
UBE4B-210ENST00000488228 COL15A1P39059 1388 aa14.37□□□□□ -0.11
UBE4B-210ENST00000488228 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.37□□□□□ -0.11
UBE4B-210ENST00000488228 HNRNPUQ00839 825 aaKnown RBP eCLIP14.37□□□□□ -0.11
UBE4B-210ENST00000488228 WDR63Q8IWG1 891 aa14.37□□□□□ -0.11
UBE4B-210ENST00000488228 USP16Q9Y5T5 823 aa14.37□□□□□ -0.11
UBE4B-210ENST00000488228 SOS1Q07889 1333 aaPredicted RBP14.37□□□□□ -0.11
UBE4B-210ENST00000488228 STARD3NLO95772 234 aa14.36□□□□□ -0.11
UBE4B-210ENST00000488228 A1BGP04217 495 aa14.36□□□□□ -0.11
UBE4B-210ENST00000488228 CANXP27824 592 aaKnown RBP14.36□□□□□ -0.11
UBE4B-210ENST00000488228 SSFA2P28290 1259 aa14.36□□□□□ -0.11
UBE4B-210ENST00000488228 RC3H1Q5TC82 1133 aaKnown RBP14.36□□□□□ -0.11
UBE4B-210ENST00000488228 COL23A1Q86Y22 540 aaPredicted RBP14.36□□□□□ -0.11
UBE4B-210ENST00000488228 ANKRD36CQ5JPF3 1778 aa14.36□□□□□ -0.11
UBE4B-210ENST00000488228 ARFGEF2Q9Y6D5 1785 aa14.35□□□□□ -0.11
UBE4B-210ENST00000488228 MSH5O43196 834 aa14.35□□□□□ -0.11
UBE4B-210ENST00000488228 RPS6KA4O75676 772 aa14.35□□□□□ -0.11
UBE4B-210ENST00000488228 TEX13AQ9BXU3 409 aaPredicted RBP14.35□□□□□ -0.11
UBE4B-210ENST00000488228 RTCBQ9Y3I0 505 aaKnown RBP14.35□□□□□ -0.11
UBE4B-210ENST00000488228 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
UBE4B-210ENST00000488228 NUP98P52948 1817 aa14.35□□□□□ -0.11
UBE4B-210ENST00000488228 CACNA1FO60840 1977 aa14.34□□□□□ -0.11
UBE4B-210ENST00000488228 ZBTB7AO95365 584 aa14.34□□□□□ -0.11
UBE4B-210ENST00000488228 HMGB2P26583 209 aaKnown RBP14.34□□□□□ -0.11
UBE4B-210ENST00000488228 C8orf58Q8NAV2 365 aa14.34□□□□□ -0.11
UBE4B-210ENST00000488228 NECTIN2Q92692 538 aa14.34□□□□□ -0.11
UBE4B-210ENST00000488228 NBPF26B4DH59 902 aa14.33□□□□□ -0.12
UBE4B-210ENST00000488228 ELL2O00472 640 aaPredicted RBP14.33□□□□□ -0.12
UBE4B-210ENST00000488228 EIF2S2P20042 333 aaKnown RBP14.33□□□□□ -0.12
UBE4B-210ENST00000488228 DUSP27Q5VZP5 1158 aa14.33□□□□□ -0.12
UBE4B-210ENST00000488228 NBPF10Q6P3W6 841 aaKnown RBP14.33□□□□□ -0.12
UBE4B-210ENST00000488228 NBPF15Q8N660 670 aa14.33□□□□□ -0.12
UBE4B-210ENST00000488228 AFDNP55196 1824 aaKnown RBP14.32□□□□□ -0.12
UBE4B-210ENST00000488228 GOLGA2Q08379 1002 aa14.32□□□□□ -0.12
UBE4B-210ENST00000488228 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
UBE4B-210ENST00000488228 TSPYL6Q8N831 410 aa14.32□□□□□ -0.12
UBE4B-210ENST00000488228 CDCA7LQ96GN5 454 aa14.32□□□□□ -0.12
UBE4B-210ENST00000488228 MYH16Q9H6N6 1097 aa14.32□□□□□ -0.12
UBE4B-210ENST00000488228 SRP68Q9UHB9 627 aaKnown RBP14.32□□□□□ -0.12
UBE4B-210ENST00000488228 ANXA1P04083 346 aa14.31□□□□□ -0.12
UBE4B-210ENST00000488228 ADRA2BP18089 450 aa14.31□□□□□ -0.12
UBE4B-210ENST00000488228 EIF5P55010 431 aaKnown RBP14.31□□□□□ -0.12
UBE4B-210ENST00000488228 EXOSC9Q06265 439 aaKnown RBP14.31□□□□□ -0.12
UBE4B-210ENST00000488228 PROSER3Q2NL68 480 aa14.31□□□□□ -0.12
UBE4B-210ENST00000488228 TRAPPC3LQ5T215 181 aa14.31□□□□□ -0.12
UBE4B-210ENST00000488228 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
UBE4B-210ENST00000488228 FLAD1Q8NFF5 587 aa14.31□□□□□ -0.12
UBE4B-210ENST00000488228 ARHGEF1Q92888 912 aaKnown RBP14.31□□□□□ -0.12
UBE4B-210ENST00000488228 HOXB7P09629 217 aa14.3□□□□□ -0.12
UBE4B-210ENST00000488228 MYL6BP14649 208 aa14.3□□□□□ -0.12
UBE4B-210ENST00000488228 IL6STP40189 918 aaPredicted RBP14.3□□□□□ -0.12
UBE4B-210ENST00000488228 CHPF2Q9P2E5 772 aa14.3□□□□□ -0.12
UBE4B-210ENST00000488228 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
UBE4B-210ENST00000488228 ZBED9Q6R2W3 1325 aa14.3□□□□□ -0.12
UBE4B-210ENST00000488228 USP42Q9H9J4 1324 aaKnown RBP14.3□□□□□ -0.12
UBE4B-210ENST00000488228 E9PSI1 815 aa14.29□□□□□ -0.12
UBE4B-210ENST00000488228 RFC4P35249 363 aa14.29□□□□□ -0.12
UBE4B-210ENST00000488228 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
UBE4B-210ENST00000488228 TWISTNBQ3B726 338 aaPredicted RBP14.29□□□□□ -0.12
UBE4B-210ENST00000488228 MTFR1LQ9H019 292 aa14.29□□□□□ -0.12
UBE4B-210ENST00000488228 ERBB4Q15303 1308 aa14.29□□□□□ -0.12
UBE4B-210ENST00000488228 PDIA6Q15084 440 aa14.28□□□□□ -0.12
UBE4B-210ENST00000488228 NRXN2Q9P2S2 1712 aa14.28□□□□□ -0.12
UBE4B-210ENST00000488228 SRCAPQ6ZRS2 3230 aa14.28□□□□□ -0.12
UBE4B-210ENST00000488228 TCERG1O14776 1098 aaKnown RBP14.27□□□□□ -0.13
UBE4B-210ENST00000488228 USPL1Q5W0Q7 1092 aa14.27□□□□□ -0.13
UBE4B-210ENST00000488228 ARXQ96QS3 562 aa14.27□□□□□ -0.13
UBE4B-210ENST00000488228 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.13
UBE4B-210ENST00000488228 KIF13BQ9NQT8 1826 aa14.27□□□□□ -0.13
UBE4B-210ENST00000488228 A0A087WZG4 1122 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 GYS1P13807 737 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 PTGER2P43116 358 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 TTLL7Q6ZT98 887 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 LRP10Q7Z4F1 713 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 DZIP3Q86Y13 1208 aaKnown RBP14.26□□□□□ -0.13
UBE4B-210ENST00000488228 SLC16A10Q8TF71 515 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 BCL2L12Q9HB09 334 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 SPON1Q9HCB6 807 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 NARFQ9UHQ1 456 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 KIAA1551Q9HCM1 1747 aa14.26□□□□□ -0.13
UBE4B-210ENST00000488228 ANKRD31Q8N7Z5 1873 aa14.25□□□□□ -0.13
UBE4B-210ENST00000488228 ZPR1O75312 459 aa14.25□□□□□ -0.13
UBE4B-210ENST00000488228 CAMTA2O94983 1202 aa14.25□□□□□ -0.13
UBE4B-210ENST00000488228 FKBP8Q14318 412 aa14.25□□□□□ -0.13
UBE4B-210ENST00000488228 NPM2Q86SE8 214 aaKnown RBP14.25□□□□□ -0.13
UBE4B-210ENST00000488228 YTHDC1Q96MU7 727 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms