RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 DDR1Q08345 913 aa15.06■□□□□ 0
RAB11FIP3-210ENST00000487899 VSIG10Q8N0Z9 540 aa15.06■□□□□ 0
RAB11FIP3-210ENST00000487899 NLGN1Q8N2Q7 840 aa15.06■□□□□ 0
RAB11FIP3-210ENST00000487899 HEG1Q9ULI3 1381 aa15.06■□□□□ 0
RAB11FIP3-210ENST00000487899 CEP350Q5VT06 3117 aa15.06■□□□□ 0
RAB11FIP3-210ENST00000487899 FKBP8Q14318 412 aa15.05■□□□□ -0
RAB11FIP3-210ENST00000487899 WWC3Q9ULE0 1092 aa15.05■□□□□ -0
RAB11FIP3-210ENST00000487899 TIAM2Q8IVF5 1701 aa15.05■□□□□ -0
RAB11FIP3-210ENST00000487899 ATP10DQ9P241 1426 aa15.04■□□□□ -0
RAB11FIP3-210ENST00000487899 GRIN3BO60391 1043 aa15.04■□□□□ -0
RAB11FIP3-210ENST00000487899 ZNF496Q96IT1 587 aaPredicted RBP15.04■□□□□ -0
RAB11FIP3-210ENST00000487899 CCDC88AQ3V6T2 1871 aa15.03■□□□□ -0
RAB11FIP3-210ENST00000487899 TEFQ10587 303 aa15.03■□□□□ -0
RAB11FIP3-210ENST00000487899 ZNF790Q6PG37 636 aa15.03■□□□□ -0
RAB11FIP3-210ENST00000487899 U2AF1L5P0DN76 240 aaPredicted RBP15.02■□□□□ -0
RAB11FIP3-210ENST00000487899 U2AF1Q01081 240 aaKnown RBP eCLIP15.02■□□□□ -0
RAB11FIP3-210ENST00000487899 SENP3-EIF4A1A0A087X0R7 540 aa15.01□□□□□ -0.01
RAB11FIP3-210ENST00000487899 POLRMTO00411 1230 aaKnown RBP15.01□□□□□ -0.01
RAB11FIP3-210ENST00000487899 USPL1Q5W0Q7 1092 aa15.01□□□□□ -0.01
RAB11FIP3-210ENST00000487899 TTC5Q8N0Z6 440 aa15.01□□□□□ -0.01
RAB11FIP3-210ENST00000487899 BCL2L12Q9HB09 334 aa15.01□□□□□ -0.01
RAB11FIP3-210ENST00000487899 NUDCQ9Y266 331 aa15.01□□□□□ -0.01
RAB11FIP3-210ENST00000487899 PARP3Q9Y6F1 533 aa15.01□□□□□ -0.01
RAB11FIP3-210ENST00000487899 NUP98P52948 1817 aa15.01□□□□□ -0.01
RAB11FIP3-210ENST00000487899 CARMIL3Q8ND23 1372 aa15□□□□□ -0.01
RAB11FIP3-210ENST00000487899 FCHSD2O94868 740 aa15□□□□□ -0.01
RAB11FIP3-210ENST00000487899 NARFQ9UHQ1 456 aa15□□□□□ -0.01
RAB11FIP3-210ENST00000487899 KCNQ3O43525 872 aa14.99□□□□□ -0.01
RAB11FIP3-210ENST00000487899 DPEP1P16444 411 aa14.99□□□□□ -0.01
RAB11FIP3-210ENST00000487899 TM4SF1P30408 202 aa14.99□□□□□ -0.01
RAB11FIP3-210ENST00000487899 EIF5P55010 431 aaKnown RBP14.99□□□□□ -0.01
RAB11FIP3-210ENST00000487899 TGFB2P61812 414 aa14.99□□□□□ -0.01
RAB11FIP3-210ENST00000487899 MCM10Q7L590 875 aa14.99□□□□□ -0.01
RAB11FIP3-210ENST00000487899 FER1L6Q2WGJ9 1857 aa14.99□□□□□ -0.01
RAB11FIP3-210ENST00000487899 DICER1Q9UPY3 1922 aaKnown RBP14.98□□□□□ -0.01
RAB11FIP3-210ENST00000487899 TNRC6CQ9HCJ0 1690 aaKnown RBP14.98□□□□□ -0.01
RAB11FIP3-210ENST00000487899 A0A0G2JLW4 131 aa14.98□□□□□ -0.01
RAB11FIP3-210ENST00000487899 KCNA3P22001 575 aa14.98□□□□□ -0.01
RAB11FIP3-210ENST00000487899 ZPR1O75312 459 aa14.97□□□□□ -0.01
RAB11FIP3-210ENST00000487899 CANXP27824 592 aaKnown RBP14.97□□□□□ -0.01
RAB11FIP3-210ENST00000487899 DCTN1Q14203 1278 aa14.97□□□□□ -0.01
RAB11FIP3-210ENST00000487899 NFIXQ14938 502 aa14.97□□□□□ -0.01
RAB11FIP3-210ENST00000487899 FMNL2Q96PY5 1086 aa14.97□□□□□ -0.01
RAB11FIP3-210ENST00000487899 ANKRD36CQ5JPF3 1778 aa14.97□□□□□ -0.01
RAB11FIP3-210ENST00000487899 BTBD11A6QL63 1104 aa14.96□□□□□ -0.01
RAB11FIP3-210ENST00000487899 PLEKHF1Q96S99 279 aa14.96□□□□□ -0.01
RAB11FIP3-210ENST00000487899 PRAMEF22A3QJZ6 481 aa14.95□□□□□ -0.02
RAB11FIP3-210ENST00000487899 STARD3NLO95772 234 aa14.95□□□□□ -0.02
RAB11FIP3-210ENST00000487899 BCS1LQ9Y276 419 aa14.95□□□□□ -0.02
RAB11FIP3-210ENST00000487899 GIGYF1O75420 1035 aaPredicted RBP14.94□□□□□ -0.02
RAB11FIP3-210ENST00000487899 SLX4Q8IY92 1834 aa14.94□□□□□ -0.02
RAB11FIP3-210ENST00000487899 HTATSF1O43719 755 aaKnown RBP14.93□□□□□ -0.02
RAB11FIP3-210ENST00000487899 CHRNA5P30532 468 aa14.93□□□□□ -0.02
RAB11FIP3-210ENST00000487899 IL6STP40189 918 aaPredicted RBP14.93□□□□□ -0.02
RAB11FIP3-210ENST00000487899 RTF1Q92541 710 aaKnown RBP14.93□□□□□ -0.02
RAB11FIP3-210ENST00000487899 TEX13AQ9BXU3 409 aaPredicted RBP14.93□□□□□ -0.02
RAB11FIP3-210ENST00000487899 A1BGP04217 495 aa14.92□□□□□ -0.02
RAB11FIP3-210ENST00000487899 LAMB2P55268 1798 aa14.91□□□□□ -0.02
RAB11FIP3-210ENST00000487899 CAMTA2O94983 1202 aa14.91□□□□□ -0.02
RAB11FIP3-210ENST00000487899 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
RAB11FIP3-210ENST00000487899 NFE2L2Q16236 605 aa14.91□□□□□ -0.02
RAB11FIP3-210ENST00000487899 TBC1D9BQ66K14 1250 aa14.91□□□□□ -0.02
RAB11FIP3-210ENST00000487899 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
RAB11FIP3-210ENST00000487899 A0A087WZG4 1122 aa14.9□□□□□ -0.02
RAB11FIP3-210ENST00000487899 SERPINB2P05120 415 aa14.9□□□□□ -0.02
RAB11FIP3-210ENST00000487899 RALBP1Q15311 655 aa14.9□□□□□ -0.02
RAB11FIP3-210ENST00000487899 PIM2Q9P1W9 311 aa14.9□□□□□ -0.02
RAB11FIP3-210ENST00000487899 TBC1D2BQ9UPU7 963 aa14.9□□□□□ -0.02
RAB11FIP3-210ENST00000487899 ZNF330Q9Y3S2 320 aaPredicted RBP14.9□□□□□ -0.02
RAB11FIP3-210ENST00000487899 MYBBP1AQ9BQG0 1328 aaKnown RBP14.9□□□□□ -0.02
RAB11FIP3-210ENST00000487899 SNRPA1P09661 255 aaKnown RBP14.89□□□□□ -0.03
RAB11FIP3-210ENST00000487899 DDX10Q13206 875 aaKnown RBP14.89□□□□□ -0.03
RAB11FIP3-210ENST00000487899 ZNF526Q8TF50 670 aaPredicted RBP14.89□□□□□ -0.03
RAB11FIP3-210ENST00000487899 THUMPD2Q9BTF0 503 aaKnown RBP14.89□□□□□ -0.03
RAB11FIP3-210ENST00000487899 NBPF26B4DH59 902 aa14.88□□□□□ -0.03
RAB11FIP3-210ENST00000487899 DALRD3Q5D0E6 543 aaKnown RBP14.88□□□□□ -0.03
RAB11FIP3-210ENST00000487899 NBPF10Q6P3W6 841 aaKnown RBP14.88□□□□□ -0.03
RAB11FIP3-210ENST00000487899 NBPF15Q8N660 670 aa14.88□□□□□ -0.03
RAB11FIP3-210ENST00000487899 GPBP1L1Q9HC44 474 aaPredicted RBP14.88□□□□□ -0.03
RAB11FIP3-210ENST00000487899 MAPK8IP3Q9UPT6 1336 aa14.88□□□□□ -0.03
RAB11FIP3-210ENST00000487899 TAF7Q15545 349 aaPredicted RBP14.87□□□□□ -0.03
RAB11FIP3-210ENST00000487899 PRR5LQ6MZQ0 368 aa14.87□□□□□ -0.03
RAB11FIP3-210ENST00000487899 BICDL1Q6ZP65 573 aa14.87□□□□□ -0.03
RAB11FIP3-210ENST00000487899 MIS18AQ9NYP9 233 aa14.87□□□□□ -0.03
RAB11FIP3-210ENST00000487899 WDR90Q96KV7 1748 aa14.86□□□□□ -0.03
RAB11FIP3-210ENST00000487899 IFFO2Q5TF58 517 aa14.86□□□□□ -0.03
RAB11FIP3-210ENST00000487899 ARHGAP27Q6ZUM4 889 aa14.86□□□□□ -0.03
RAB11FIP3-210ENST00000487899 DZIP3Q86Y13 1208 aaKnown RBP14.86□□□□□ -0.03
RAB11FIP3-210ENST00000487899 NEFMP07197 916 aa14.85□□□□□ -0.03
RAB11FIP3-210ENST00000487899 KIF3CO14782 793 aa14.84□□□□□ -0.03
RAB11FIP3-210ENST00000487899 EIF4A1P60842 406 aaKnown RBP14.84□□□□□ -0.03
RAB11FIP3-210ENST00000487899 RASSF7Q02833 373 aa14.84□□□□□ -0.03
RAB11FIP3-210ENST00000487899 C2CD5Q86YS7 1000 aa14.84□□□□□ -0.03
RAB11FIP3-210ENST00000487899 C9orf131Q5VYM1 1079 aa14.83□□□□□ -0.04
RAB11FIP3-210ENST00000487899 CCDC24Q8N4L8 307 aa14.83□□□□□ -0.04
RAB11FIP3-210ENST00000487899 CNBD1Q8NA66 436 aa14.83□□□□□ -0.04
RAB11FIP3-210ENST00000487899 DDX60Q8IY21 1712 aaKnown RBP14.83□□□□□ -0.04
RAB11FIP3-210ENST00000487899 RGL2O15211 777 aa14.82□□□□□ -0.04
RAB11FIP3-210ENST00000487899 PRELPP51888 382 aa14.82□□□□□ -0.04
RAB11FIP3-210ENST00000487899 PNISRQ8TF01 805 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms