RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 MAP2K3P46734 347 aa9.78□□□□□ -0.84
SMC4-219ENST00000487747 CABP1Q9NZU7 370 aa9.78□□□□□ -0.84
SMC4-219ENST00000487747 KIAA1024Q9UPX6 916 aa9.78□□□□□ -0.84
SMC4-219ENST00000487747 A0A1W2PNR3 127 aa9.77□□□□□ -0.85
SMC4-219ENST00000487747 ZBTB7BO15156 539 aaPredicted RBP9.77□□□□□ -0.85
SMC4-219ENST00000487747 SNRPNP63162 240 aaKnown RBP9.77□□□□□ -0.85
SMC4-219ENST00000487747 PSME1Q06323 249 aa9.77□□□□□ -0.85
SMC4-219ENST00000487747 TBCELQ5QJ74 424 aa9.77□□□□□ -0.85
SMC4-219ENST00000487747 GALNT6Q8NCL4 622 aa9.77□□□□□ -0.85
SMC4-219ENST00000487747 ZDHHC1Q8WTX9 485 aa9.77□□□□□ -0.85
SMC4-219ENST00000487747 SCHIP1Q9P0W5 487 aaPredicted RBP9.77□□□□□ -0.85
SMC4-219ENST00000487747 LZTS3O60299 673 aaPredicted RBP9.76□□□□□ -0.85
SMC4-219ENST00000487747 BMP4P12644 408 aa9.76□□□□□ -0.85
SMC4-219ENST00000487747 TXLNAP40222 546 aa9.76□□□□□ -0.85
SMC4-219ENST00000487747 EPHA4P54764 986 aa9.76□□□□□ -0.85
SMC4-219ENST00000487747 CLDN10P78369 228 aa9.76□□□□□ -0.85
SMC4-219ENST00000487747 ARSJQ5FYB0 599 aaPredicted RBP9.76□□□□□ -0.85
SMC4-219ENST00000487747 KANK3Q6NY19 840 aa9.76□□□□□ -0.85
SMC4-219ENST00000487747 TNS4Q8IZW8 715 aa9.76□□□□□ -0.85
SMC4-219ENST00000487747 ZIC5Q96T25 663 aa9.76□□□□□ -0.85
SMC4-219ENST00000487747 LRRC4BQ9NT99 713 aa9.76□□□□□ -0.85
SMC4-219ENST00000487747 USP17L3A6NCW0 530 aa9.75□□□□□ -0.85
SMC4-219ENST00000487747 USP17L4A6NCW7 530 aa9.75□□□□□ -0.85
SMC4-219ENST00000487747 USP17L2Q6R6M4 530 aa9.75□□□□□ -0.85
SMC4-219ENST00000487747 USP17L1Q7RTZ2 530 aa9.75□□□□□ -0.85
SMC4-219ENST00000487747 C1orf216Q8TAB5 229 aa9.75□□□□□ -0.85
SMC4-219ENST00000487747 PCDHGC4Q9Y5F7 938 aa9.75□□□□□ -0.85
SMC4-219ENST00000487747 DCDC2BA2VCK2 349 aa9.74□□□□□ -0.85
SMC4-219ENST00000487747 BACH1O14867 736 aa9.74□□□□□ -0.85
SMC4-219ENST00000487747 ATXN7O15265 892 aaPredicted RBP9.74□□□□□ -0.85
SMC4-219ENST00000487747 FOXK2Q01167 660 aa9.74□□□□□ -0.85
SMC4-219ENST00000487747 NBPF1Q3BBV0 1214 aa9.74□□□□□ -0.85
SMC4-219ENST00000487747 NLRP8Q86W28 1048 aa9.74□□□□□ -0.85
SMC4-219ENST00000487747 GGA1Q9UJY5 639 aa9.74□□□□□ -0.85
SMC4-219ENST00000487747 DNMT3AQ9Y6K1 912 aaPredicted RBP9.74□□□□□ -0.85
SMC4-219ENST00000487747 MAPTP10636 758 aaKnown RBP9.73□□□□□ -0.85
SMC4-219ENST00000487747 TNP2Q05952 138 aa9.73□□□□□ -0.85
SMC4-219ENST00000487747 SH3PXD2AQ5TCZ1 1133 aa9.73□□□□□ -0.85
SMC4-219ENST00000487747 GPAT2Q6NUI2 795 aa9.73□□□□□ -0.85
SMC4-219ENST00000487747 FNBP4Q8N3X1 1017 aaPredicted RBP9.73□□□□□ -0.85
SMC4-219ENST00000487747 BEND7Q8N7W2 519 aaPredicted RBP9.73□□□□□ -0.85
SMC4-219ENST00000487747 TPCN2Q8NHX9 752 aa9.73□□□□□ -0.85
SMC4-219ENST00000487747 EDARADDQ8WWZ3 215 aa9.73□□□□□ -0.85
SMC4-219ENST00000487747 ZDHHC3Q9NYG2 299 aa9.73□□□□□ -0.85
SMC4-219ENST00000487747 ATP9BO43861 1147 aa9.72□□□□□ -0.85
SMC4-219ENST00000487747 HOXB4P17483 251 aaPredicted RBP9.72□□□□□ -0.85
SMC4-219ENST00000487747 CD33P20138 364 aa9.72□□□□□ -0.85
SMC4-219ENST00000487747 TMEM132AQ24JP5 1023 aa9.72□□□□□ -0.85
SMC4-219ENST00000487747 FIGNL1Q6PIW4 674 aa9.72□□□□□ -0.85
SMC4-219ENST00000487747 PLEKHM2Q8IWE5 1019 aa9.72□□□□□ -0.85
SMC4-219ENST00000487747 L3MBTL2Q969R5 705 aa9.72□□□□□ -0.85
SMC4-219ENST00000487747 DCAF5Q96JK2 942 aa9.72□□□□□ -0.85
SMC4-219ENST00000487747 GDF2Q9UK05 429 aaPredicted RBP9.72□□□□□ -0.85
SMC4-219ENST00000487747 ITGB2P05107 769 aa9.71□□□□□ -0.86
SMC4-219ENST00000487747 TATP17735 454 aaPredicted RBP9.71□□□□□ -0.86
SMC4-219ENST00000487747 SLC9A9Q8IVB4 645 aa9.71□□□□□ -0.86
SMC4-219ENST00000487747 KLF15Q9UIH9 416 aa9.71□□□□□ -0.86
SMC4-219ENST00000487747 PHF20L1A8MW92 1017 aa9.7□□□□□ -0.86
SMC4-219ENST00000487747 KHNYNO15037 678 aaKnown RBP9.7□□□□□ -0.86
SMC4-219ENST00000487747 NOS2P35228 1153 aa9.7□□□□□ -0.86
SMC4-219ENST00000487747 TEAD4Q15561 434 aa9.7□□□□□ -0.86
SMC4-219ENST00000487747 CCDC102BQ68D86 513 aa9.7□□□□□ -0.86
SMC4-219ENST00000487747 PODNQ7Z5L7 613 aa9.7□□□□□ -0.86
SMC4-219ENST00000487747 GOLGA6L1Q8N7Z2 621 aa9.7□□□□□ -0.86
SMC4-219ENST00000487747 C7orf43Q8WVR3 580 aa9.7□□□□□ -0.86
SMC4-219ENST00000487747 STRN4Q9NRL3 753 aa9.7□□□□□ -0.86
SMC4-219ENST00000487747 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
SMC4-219ENST00000487747 NEURL1BA8MQ27 555 aa9.69□□□□□ -0.86
SMC4-219ENST00000487747 BICDL1Q6ZP65 573 aa9.69□□□□□ -0.86
SMC4-219ENST00000487747 OGFOD1Q8N543 542 aa9.69□□□□□ -0.86
SMC4-219ENST00000487747 GLMNQ92990 594 aa9.69□□□□□ -0.86
SMC4-219ENST00000487747 DKK1O94907 266 aa9.68□□□□□ -0.86
SMC4-219ENST00000487747 GRIN2CQ14957 1233 aa9.68□□□□□ -0.86
SMC4-219ENST00000487747 SLCO4C1Q6ZQN7 724 aa9.68□□□□□ -0.86
SMC4-219ENST00000487747 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
SMC4-219ENST00000487747 TRIM50Q86XT4 487 aa9.68□□□□□ -0.86
SMC4-219ENST00000487747 TSPAN10Q9H1Z9 355 aaPredicted RBP9.68□□□□□ -0.86
SMC4-219ENST00000487747 RRAGCQ9HB90 399 aa9.68□□□□□ -0.86
SMC4-219ENST00000487747 EML1O00423 815 aa9.67□□□□□ -0.86
SMC4-219ENST00000487747 ARAFP10398 606 aa9.67□□□□□ -0.86
SMC4-219ENST00000487747 EPXP11678 715 aa9.67□□□□□ -0.86
SMC4-219ENST00000487747 PLA2G4EQ3MJ16 856 aa9.67□□□□□ -0.86
SMC4-219ENST00000487747 ZNF594Q96JF6 807 aaPredicted RBP9.67□□□□□ -0.86
SMC4-219ENST00000487747 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
SMC4-219ENST00000487747 ZNF232Q9UNY5 417 aa9.67□□□□□ -0.86
SMC4-219ENST00000487747 SFI1A8K8P3 1242 aa9.66□□□□□ -0.86
SMC4-219ENST00000487747 LRRC69Q6ZNQ3 347 aa9.66□□□□□ -0.86
SMC4-219ENST00000487747 TSEN2Q8NCE0 465 aaKnown RBP9.66□□□□□ -0.86
SMC4-219ENST00000487747 BTBD6Q96KE9 485 aa9.66□□□□□ -0.86
SMC4-219ENST00000487747 GJA3Q9Y6H8 435 aa9.66□□□□□ -0.86
SMC4-219ENST00000487747 EFSO43281 561 aa9.65□□□□□ -0.86
SMC4-219ENST00000487747 FAM157BP0CG42 384 aa9.65□□□□□ -0.86
SMC4-219ENST00000487747 COL8A1P27658 744 aa9.65□□□□□ -0.86
SMC4-219ENST00000487747 ATP1A2P50993 1020 aa9.65□□□□□ -0.86
SMC4-219ENST00000487747 FAM182BQ5T319 152 aa9.65□□□□□ -0.86
SMC4-219ENST00000487747 LINC00114Q6XXX2 140 aa9.65□□□□□ -0.86
SMC4-219ENST00000487747 FCHSD1Q86WN1 690 aa9.65□□□□□ -0.86
SMC4-219ENST00000487747 SUV39H2Q9H5I1 410 aa9.65□□□□□ -0.86
SMC4-219ENST00000487747 SERTM1A2A2V5 107 aa9.64□□□□□ -0.87
SMC4-219ENST00000487747 AMPD1P23109 780 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms