RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 SHANK3Q9BYB0 1731 aa25.46■■□□□ 1.67
PHF1-209ENST00000487667 MSH5O43196 834 aa25.45■■□□□ 1.67
PHF1-209ENST00000487667 ANP32AP39687 249 aaKnown RBP25.45■■□□□ 1.67
PHF1-209ENST00000487667 THRAP3Q9Y2W1 955 aaKnown RBP25.45■■□□□ 1.67
PHF1-209ENST00000487667 ZNF496Q96IT1 587 aaPredicted RBP25.45■■□□□ 1.66
PHF1-209ENST00000487667 ERBB4Q15303 1308 aa25.44■■□□□ 1.66
PHF1-209ENST00000487667 DDX54Q8TDD1 881 aaKnown RBP25.44■■□□□ 1.66
PHF1-209ENST00000487667 ZBTB47Q9UFB7 747 aaPredicted RBP25.44■■□□□ 1.66
PHF1-209ENST00000487667 C8orf34Q49A92 452 aa25.43■■□□□ 1.66
PHF1-209ENST00000487667 KSR2Q6VAB6 950 aa25.43■■□□□ 1.66
PHF1-209ENST00000487667 C8orf37Q96NL8 207 aa25.43■■□□□ 1.66
PHF1-209ENST00000487667 IBTKQ9P2D0 1353 aaPredicted RBP25.43■■□□□ 1.66
PHF1-209ENST00000487667 NGLY1Q96IV0 654 aa25.43■■□□□ 1.66
PHF1-209ENST00000487667 PI4KAP2A4QPH2 592 aa25.42■■□□□ 1.66
PHF1-209ENST00000487667 ALDH1L1O75891 902 aa25.42■■□□□ 1.66
PHF1-209ENST00000487667 PI4KAP1Q8N8J0 262 aa25.42■■□□□ 1.66
PHF1-209ENST00000487667 ANKRD45Q5TZF3 282 aa25.41■■□□□ 1.66
PHF1-209ENST00000487667 NWD2Q9ULI1 1742 aa25.4■■□□□ 1.66
PHF1-209ENST00000487667 UBTFL1P0CB47 393 aaPredicted RBP25.4■■□□□ 1.66
PHF1-209ENST00000487667 BEND3Q5T5X7 828 aa25.39■■□□□ 1.66
PHF1-209ENST00000487667 PAPPAQ13219 1627 aa25.39■■□□□ 1.66
PHF1-209ENST00000487667 LAMB4A4D0S4 1761 aa25.39■■□□□ 1.66
PHF1-209ENST00000487667 C5P01031 1676 aa25.39■■□□□ 1.66
PHF1-209ENST00000487667 ADCY9O60503 1353 aa25.39■■□□□ 1.66
PHF1-209ENST00000487667 LRP6O75581 1613 aa25.39■■□□□ 1.65
PHF1-209ENST00000487667 UBR2Q8IWV8 1755 aa25.38■■□□□ 1.65
PHF1-209ENST00000487667 EXOC5O00471 708 aa25.38■■□□□ 1.65
PHF1-209ENST00000487667 MEX3CQ5U5Q3 659 aaKnown RBP25.38■■□□□ 1.65
PHF1-209ENST00000487667 USP44Q9H0E7 712 aa25.38■■□□□ 1.65
PHF1-209ENST00000487667 TMOD3Q9NYL9 352 aa25.38■■□□□ 1.65
PHF1-209ENST00000487667 PDIA6Q15084 440 aa25.37■■□□□ 1.65
PHF1-209ENST00000487667 NRAPQ86VF7 1730 aa25.37■■□□□ 1.65
PHF1-209ENST00000487667 PRAMEF22A3QJZ6 481 aa25.37■■□□□ 1.65
PHF1-209ENST00000487667 LNPKQ9C0E8 428 aa25.37■■□□□ 1.65
PHF1-209ENST00000487667 WNK3Q9BYP7 1800 aa25.37■■□□□ 1.65
PHF1-209ENST00000487667 SLIT2O94813 1529 aa25.36■■□□□ 1.65
PHF1-209ENST00000487667 ATP8B2P98198 1209 aa25.36■■□□□ 1.65
PHF1-209ENST00000487667 MAP3K2Q9Y2U5 619 aa25.36■■□□□ 1.65
PHF1-209ENST00000487667 TNS2Q63HR2 1409 aa25.36■■□□□ 1.65
PHF1-209ENST00000487667 UNC5CLQ8IV45 518 aa25.35■■□□□ 1.65
PHF1-209ENST00000487667 CCDC9Q9Y3X0 531 aaKnown RBP25.35■■□□□ 1.65
PHF1-209ENST00000487667 ANXA1P04083 346 aa25.35■■□□□ 1.65
PHF1-209ENST00000487667 PROSER3Q2NL68 480 aa25.35■■□□□ 1.65
PHF1-209ENST00000487667 LINS1Q8NG48 757 aa25.35■■□□□ 1.65
PHF1-209ENST00000487667 SPATA31A1Q5TZJ5 1347 aa25.35■■□□□ 1.65
PHF1-209ENST00000487667 TEX13AQ9BXU3 409 aaPredicted RBP25.34■■□□□ 1.65
PHF1-209ENST00000487667 NEXNQ0ZGT2 675 aa25.33■■□□□ 1.65
PHF1-209ENST00000487667 FNBP4Q8N3X1 1017 aaPredicted RBP25.33■■□□□ 1.65
PHF1-209ENST00000487667 KCPQ6ZWJ8 1503 aa25.32■■□□□ 1.64
PHF1-209ENST00000487667 VSIG10Q8N0Z9 540 aa25.32■■□□□ 1.64
PHF1-209ENST00000487667 USP16Q9Y5T5 823 aa25.32■■□□□ 1.64
PHF1-209ENST00000487667 ERICH6Q7L0X2 663 aa25.31■■□□□ 1.64
PHF1-209ENST00000487667 RIC3Q7Z5B4 369 aa25.31■■□□□ 1.64
PHF1-209ENST00000487667 GLI3P10071 1580 aa25.31■■□□□ 1.64
PHF1-209ENST00000487667 LRRFIP2Q9Y608 721 aaKnown RBP25.31■■□□□ 1.64
PHF1-209ENST00000487667 TOGARAM1Q9Y4F4 1720 aa25.31■■□□□ 1.64
PHF1-209ENST00000487667 BMP2KLQ5H9B9 411 aa25.3■■□□□ 1.64
PHF1-209ENST00000487667 BARGINQ6ZT62 677 aa25.3■■□□□ 1.64
PHF1-209ENST00000487667 USP21Q9UK80 565 aa25.3■■□□□ 1.64
PHF1-209ENST00000487667 SPATA31A5Q5VU36 1347 aa25.3■■□□□ 1.64
PHF1-209ENST00000487667 SPATA31A7Q8IWB4 1347 aa25.3■■□□□ 1.64
PHF1-209ENST00000487667 EIF5BO60841 1220 aaKnown RBP25.29■■□□□ 1.64
PHF1-209ENST00000487667 FBXO41Q8TF61 875 aa25.29■■□□□ 1.64
PHF1-209ENST00000487667 UPF2Q9HAU5 1272 aaKnown RBP25.29■■□□□ 1.64
PHF1-209ENST00000487667 BCL9LQ86UU0 1499 aa25.29■■□□□ 1.64
PHF1-209ENST00000487667 XAGE3Q8WTP9 111 aa25.29■■□□□ 1.64
PHF1-209ENST00000487667 C9orf78Q9NZ63 289 aaPredicted RBP25.29■■□□□ 1.64
PHF1-209ENST00000487667 MYL6BP14649 208 aa25.28■■□□□ 1.64
PHF1-209ENST00000487667 ANKRD13DQ6ZTN6 518 aa25.28■■□□□ 1.64
PHF1-209ENST00000487667 COPS6Q7L5N1 327 aa25.28■■□□□ 1.64
PHF1-209ENST00000487667 AIMP1Q12904 312 aaKnown RBP25.27■■□□□ 1.64
PHF1-209ENST00000487667 LRP10Q7Z4F1 713 aa25.27■■□□□ 1.64
PHF1-209ENST00000487667 SSH3Q8TE77 659 aa25.27■■□□□ 1.64
PHF1-209ENST00000487667 DDB1Q16531 1140 aa25.27■■□□□ 1.64
PHF1-209ENST00000487667 METTL22Q9BUU2 404 aaPredicted RBP25.27■■□□□ 1.64
PHF1-209ENST00000487667 UTYO14607 1347 aa25.26■■□□□ 1.63
PHF1-209ENST00000487667 VPS72Q15906 364 aa25.26■■□□□ 1.63
PHF1-209ENST00000487667 DDRGK1Q96HY6 314 aa25.26■■□□□ 1.63
PHF1-209ENST00000487667 IPO9Q96P70 1041 aaKnown RBP25.26■■□□□ 1.63
PHF1-209ENST00000487667 MTX1Q13505 466 aa25.25■■□□□ 1.63
PHF1-209ENST00000487667 HSP90AB4PQ58FF6 505 aa25.25■■□□□ 1.63
PHF1-209ENST00000487667 BCL9O00512 1426 aa25.25■■□□□ 1.63
PHF1-209ENST00000487667 RAB11FIP3O75154 756 aa25.24■■□□□ 1.63
PHF1-209ENST00000487667 PLBD2Q8NHP8 589 aa25.24■■□□□ 1.63
PHF1-209ENST00000487667 PIGBQ92521 554 aa25.24■■□□□ 1.63
PHF1-209ENST00000487667 GRM8O00222 908 aa25.24■■□□□ 1.63
PHF1-209ENST00000487667 NBPF7P0C2Y1 421 aaPredicted RBP25.24■■□□□ 1.63
PHF1-209ENST00000487667 AFF2P51816 1311 aa25.23■■□□□ 1.63
PHF1-209ENST00000487667 POLA2Q14181 598 aa25.23■■□□□ 1.63
PHF1-209ENST00000487667 ITGB4P16144 1822 aa25.23■■□□□ 1.63
PHF1-209ENST00000487667 PTCD1O75127 700 aaKnown RBP25.22■■□□□ 1.63
PHF1-209ENST00000487667 NPM2Q86SE8 214 aaKnown RBP25.22■■□□□ 1.63
PHF1-209ENST00000487667 LRRCC1Q9C099 1032 aa25.22■■□□□ 1.63
PHF1-209ENST00000487667 PNMA6EA0A0J9YXQ4 647 aa25.22■■□□□ 1.63
PHF1-209ENST00000487667 STARD3NLO95772 234 aa25.22■■□□□ 1.63
PHF1-209ENST00000487667 PPP1R42Q7Z4L9 355 aa25.21■■□□□ 1.63
PHF1-209ENST00000487667 PLEKHM2Q8IWE5 1019 aa25.21■■□□□ 1.63
PHF1-209ENST00000487667 ATG3Q9NT62 314 aa25.2■■□□□ 1.62
PHF1-209ENST00000487667 NEURL1BA8MQ27 555 aa25.2■■□□□ 1.62
PHF1-209ENST00000487667 SRGAP3O43295 1099 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms