RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 SCUBE2Q9NQ36 999 aa7.79□□□□□ -1.16
MACF1-221ENST00000487656 CCNL1Q9UK58 526 aaPredicted RBP7.79□□□□□ -1.16
MACF1-221ENST00000487656 PCDHGA4Q9Y5G9 962 aa7.79□□□□□ -1.16
MACF1-221ENST00000487656 RGPD2P0DJD1 1756 aa7.79□□□□□ -1.16
MACF1-221ENST00000487656 CGNL1Q0VF96 1302 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 MAP3K19Q56UN5 1328 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 PNPLA7Q6ZV29 1317 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 LY75O60449 1722 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 ST20-MTHFSA0A0A6YYL1 179 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 POTEJP0CG39 1038 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 KCNQ4P56696 695 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 SLAIN1Q8ND83 568 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 RAPGEF4Q8WZA2 1011 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 USP47Q96K76 1375 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 COL24A1Q17RW2 1714 aa7.78□□□□□ -1.16
MACF1-221ENST00000487656 POTEB2H3BUK9 544 aa7.77□□□□□ -1.17
MACF1-221ENST00000487656 GIGYF1O75420 1035 aaPredicted RBP7.77□□□□□ -1.17
MACF1-221ENST00000487656 FBLN1P23142 703 aa7.77□□□□□ -1.17
MACF1-221ENST00000487656 FLAD1Q8NFF5 587 aa7.77□□□□□ -1.17
MACF1-221ENST00000487656 DOT1LQ8TEK3 1739 aa7.77□□□□□ -1.17
MACF1-221ENST00000487656 TUBGCP6Q96RT7 1819 aa7.76□□□□□ -1.17
MACF1-221ENST00000487656 TATP17735 454 aaPredicted RBP7.76□□□□□ -1.17
MACF1-221ENST00000487656 DOK7Q18PE1 504 aa7.76□□□□□ -1.17
MACF1-221ENST00000487656 NBPF6Q5VWK0 638 aa7.76□□□□□ -1.17
MACF1-221ENST00000487656 COL23A1Q86Y22 540 aaPredicted RBP7.76□□□□□ -1.17
MACF1-221ENST00000487656 NBPF4Q96M43 638 aa7.76□□□□□ -1.17
MACF1-221ENST00000487656 TESK2Q96S53 571 aa7.76□□□□□ -1.17
MACF1-221ENST00000487656 SMG6Q86US8 1419 aaKnown RBP7.76□□□□□ -1.17
MACF1-221ENST00000487656 RTL1A6NKG5 1358 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 RIMBP2O15034 1052 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 FYB1O15117 783 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 TMF1P82094 1093 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 RRS1Q15050 365 aaKnown RBP7.75□□□□□ -1.17
MACF1-221ENST00000487656 CDCA8Q53HL2 280 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 NLGN2Q8NFZ4 835 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 AK7Q96M32 723 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 CD2APQ9Y5K6 639 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 PCDH11XQ9BZA7 1347 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 PCDH11YQ9BZA8 1340 aa7.75□□□□□ -1.17
MACF1-221ENST00000487656 FCHSD2O94868 740 aa7.74□□□□□ -1.17
MACF1-221ENST00000487656 PHF14O94880 888 aa7.74□□□□□ -1.17
MACF1-221ENST00000487656 MPRIPQ6WCQ1 1025 aa7.74□□□□□ -1.17
MACF1-221ENST00000487656 USHBP1Q8N6Y0 703 aa7.74□□□□□ -1.17
MACF1-221ENST00000487656 SMARCC1Q92922 1105 aaPredicted RBP7.74□□□□□ -1.17
MACF1-221ENST00000487656 EPAS1Q99814 870 aa7.74□□□□□ -1.17
MACF1-221ENST00000487656 GGNBP2Q9H3C7 697 aa7.74□□□□□ -1.17
MACF1-221ENST00000487656 SHANK3Q9BYB0 1731 aa7.74□□□□□ -1.17
MACF1-221ENST00000487656 MEGF6O75095 1541 aa7.73□□□□□ -1.17
MACF1-221ENST00000487656 NSD2O96028 1365 aa7.73□□□□□ -1.17
MACF1-221ENST00000487656 KIF24Q5T7B8 1368 aa7.73□□□□□ -1.17
MACF1-221ENST00000487656 YBX3P16989 372 aaKnown RBP eCLIP7.73□□□□□ -1.17
MACF1-221ENST00000487656 HSP90AB2PQ58FF8 381 aa7.73□□□□□ -1.17
MACF1-221ENST00000487656 MSL1Q68DK7 614 aa7.73□□□□□ -1.17
MACF1-221ENST00000487656 TAF1LQ8IZX4 1826 aa7.73□□□□□ -1.17
MACF1-221ENST00000487656 C5P01031 1676 aa7.73□□□□□ -1.17
MACF1-221ENST00000487656 INSRP06213 1382 aa7.72□□□□□ -1.17
MACF1-221ENST00000487656 UTRNP46939 3433 aa7.72□□□□□ -1.17
MACF1-221ENST00000487656 NEUROD2Q15784 382 aa7.72□□□□□ -1.17
MACF1-221ENST00000487656 ZNF710Q8N1W2 664 aa7.72□□□□□ -1.17
MACF1-221ENST00000487656 SPG7Q9UQ90 795 aa7.72□□□□□ -1.17
MACF1-221ENST00000487656 ITGB4P16144 1822 aa7.72□□□□□ -1.17
MACF1-221ENST00000487656 FLT4P35916 1363 aa7.71□□□□□ -1.17
MACF1-221ENST00000487656 PALLDQ8WX93 1383 aa7.71□□□□□ -1.17
MACF1-221ENST00000487656 GPR37O15354 613 aa7.71□□□□□ -1.18
MACF1-221ENST00000487656 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
MACF1-221ENST00000487656 CYP27B1O15528 508 aa7.71□□□□□ -1.18
MACF1-221ENST00000487656 MAP3K7O43318 606 aa7.71□□□□□ -1.18
MACF1-221ENST00000487656 BRPF1P55201 1214 aaPredicted RBP7.71□□□□□ -1.18
MACF1-221ENST00000487656 HIC1Q14526 733 aa7.71□□□□□ -1.18
MACF1-221ENST00000487656 TYW1BQ6NUM6 668 aa7.71□□□□□ -1.18
MACF1-221ENST00000487656 GPBP1L1Q9HC44 474 aaPredicted RBP7.71□□□□□ -1.18
MACF1-221ENST00000487656 ZSWIM6Q9HCJ5 1215 aa7.71□□□□□ -1.18
MACF1-221ENST00000487656 MAP2P11137 1827 aaKnown RBP7.71□□□□□ -1.18
MACF1-221ENST00000487656 KIF20BQ96Q89 1820 aa7.71□□□□□ -1.18
MACF1-221ENST00000487656 NSD3Q9BZ95 1437 aa7.7□□□□□ -1.18
MACF1-221ENST00000487656 GNPATO15228 680 aa7.7□□□□□ -1.18
MACF1-221ENST00000487656 HOXB3P14651 431 aaPredicted RBP7.7□□□□□ -1.18
MACF1-221ENST00000487656 ARSIQ5FYB1 569 aa7.7□□□□□ -1.18
MACF1-221ENST00000487656 PCDHGA10Q9Y5H3 936 aa7.7□□□□□ -1.18
MACF1-221ENST00000487656 C4BP0C0L5 1744 aa7.69□□□□□ -1.18
MACF1-221ENST00000487656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.69□□□□□ -1.18
MACF1-221ENST00000487656 SNPHO15079 494 aa7.69□□□□□ -1.18
MACF1-221ENST00000487656 NUDT7P0C024 238 aa7.69□□□□□ -1.18
MACF1-221ENST00000487656 SSFA2P28290 1259 aa7.69□□□□□ -1.18
MACF1-221ENST00000487656 TMEM132AQ24JP5 1023 aa7.69□□□□□ -1.18
MACF1-221ENST00000487656 PIGBQ92521 554 aa7.69□□□□□ -1.18
MACF1-221ENST00000487656 FBXW7Q969H0 707 aa7.69□□□□□ -1.18
MACF1-221ENST00000487656 TMOD3Q9NYL9 352 aa7.69□□□□□ -1.18
MACF1-221ENST00000487656 ATP10DQ9P241 1426 aa7.69□□□□□ -1.18
MACF1-221ENST00000487656 UBR3Q6ZT12 1888 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 LOC102724428A0A0B4J2F2 783 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 SIK1P57059 783 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 PTGDRQ13258 359 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 IFFO2Q5TF58 517 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 IFNL2Q8IZJ0 200 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 EMILIN1Q9Y6C2 1016 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 WASHC2AQ641Q2 1341 aa7.68□□□□□ -1.18
MACF1-221ENST00000487656 TRIM66O15016 1216 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms