RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 HDAC1Q13547 482 aaPredicted RBP17.14■□□□□ 0.33
EPHB4-206ENST00000487222 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
EPHB4-206ENST00000487222 CCDC8Q9H0W5 538 aaPredicted RBP17.14■□□□□ 0.33
EPHB4-206ENST00000487222 ECHDC1Q9NTX5 307 aa17.14■□□□□ 0.33
EPHB4-206ENST00000487222 NEFHP12036 1026 aa17.13■□□□□ 0.33
EPHB4-206ENST00000487222 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
EPHB4-206ENST00000487222 GOLGA6L7A0A1B0GV03 622 aa17.13■□□□□ 0.33
EPHB4-206ENST00000487222 MYD88Q99836 296 aa17.13■□□□□ 0.33
EPHB4-206ENST00000487222 TOP1P11387 765 aaKnown RBP17.13■□□□□ 0.33
EPHB4-206ENST00000487222 STX6O43752 255 aa17.13■□□□□ 0.33
EPHB4-206ENST00000487222 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
EPHB4-206ENST00000487222 THOC2Q8NI27 1593 aaKnown RBP17.13■□□□□ 0.33
EPHB4-206ENST00000487222 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 TAF4BQ92750 862 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 CENPHQ9H3R5 247 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 FAM193AP78312 1265 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 CKAP2LQ8IYA6 745 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 DISP3Q9P2K9 1392 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 FOXO3O43524 673 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 NAPBQ9H115 298 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 HYPKQ9NX55 129 aa17.12■□□□□ 0.33
EPHB4-206ENST00000487222 ARHGAP45Q92619 1136 aa17.11■□□□□ 0.33
EPHB4-206ENST00000487222 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
EPHB4-206ENST00000487222 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
EPHB4-206ENST00000487222 PHAXQ9H814 394 aaKnown RBP17.11■□□□□ 0.33
EPHB4-206ENST00000487222 TTC21BQ7Z4L5 1316 aa17.11■□□□□ 0.33
EPHB4-206ENST00000487222 KIF5CO60282 957 aa17.11■□□□□ 0.33
EPHB4-206ENST00000487222 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
EPHB4-206ENST00000487222 CRACR2AQ9BSW2 395 aa17.11■□□□□ 0.33
EPHB4-206ENST00000487222 URI1O94763 535 aaPredicted RBP17.11■□□□□ 0.33
EPHB4-206ENST00000487222 UVSSAQ2YD98 709 aa17.11■□□□□ 0.33
EPHB4-206ENST00000487222 TNNT1P13805 278 aa17.1■□□□□ 0.33
EPHB4-206ENST00000487222 USP8P40818 1118 aa17.1■□□□□ 0.33
EPHB4-206ENST00000487222 USHBP1Q8N6Y0 703 aa17.1■□□□□ 0.33
EPHB4-206ENST00000487222 GSDMDP57764 484 aa17.1■□□□□ 0.33
EPHB4-206ENST00000487222 GDPD2Q9HCC8 539 aa17.1■□□□□ 0.33
EPHB4-206ENST00000487222 CAVIN2O95810 425 aa17.1■□□□□ 0.33
EPHB4-206ENST00000487222 GJB2P29033 226 aa17.1■□□□□ 0.33
EPHB4-206ENST00000487222 NUCB1Q02818 461 aa17.1■□□□□ 0.33
EPHB4-206ENST00000487222 ZNF213O14771 459 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 SEPT7Q16181 437 aaKnown RBP17.09■□□□□ 0.33
EPHB4-206ENST00000487222 PIBF1Q8WXW3 757 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 ZNF287Q9HBT7 754 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 UBE2HP62256 183 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 GUCY1B3Q02153 619 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 SPA17Q15506 151 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 TAF3Q5VWG9 929 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 FSIP1Q8NA03 581 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 WWC2Q6AWC2 1192 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 KLHL10Q6JEL2 608 aa17.09■□□□□ 0.33
EPHB4-206ENST00000487222 CGNQ9P2M7 1197 aaKnown RBP17.09■□□□□ 0.33
EPHB4-206ENST00000487222 ADCY5O95622 1261 aa17.08■□□□□ 0.33
EPHB4-206ENST00000487222 MAP3K12Q12852 859 aa17.08■□□□□ 0.33
EPHB4-206ENST00000487222 KIF4BQ2VIQ3 1234 aa17.08■□□□□ 0.33
EPHB4-206ENST00000487222 ERICH4A6NGS2 130 aa17.08■□□□□ 0.32
EPHB4-206ENST00000487222 CEBPAP49715 358 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-206ENST00000487222 ZRSR2Q15696 482 aaKnown RBP17.08■□□□□ 0.32
EPHB4-206ENST00000487222 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
EPHB4-206ENST00000487222 KDM5BQ9UGL1 1544 aa17.08■□□□□ 0.32
EPHB4-206ENST00000487222 IFIT5Q13325 482 aaKnown RBP17.08■□□□□ 0.32
EPHB4-206ENST00000487222 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-206ENST00000487222 SEPT11Q9NVA2 429 aaKnown RBP17.08■□□□□ 0.32
EPHB4-206ENST00000487222 ANKRD36BQ8N2N9 1353 aa17.08■□□□□ 0.32
EPHB4-206ENST00000487222 MINDY4BA8MYZ0 360 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 CALRP27797 417 aaKnown RBP17.07■□□□□ 0.32
EPHB4-206ENST00000487222 CASQ1P31415 396 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 STX1AQ16623 288 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 MAP9Q49MG5 647 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 FKBP15Q5T1M5 1219 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 ANKRD18AQ8IVF6 992 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
EPHB4-206ENST00000487222 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 TAX1BP1Q86VP1 789 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 SLC12A7Q9Y666 1083 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 ZNF165P49910 485 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 CNNM3Q8NE01 707 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
EPHB4-206ENST00000487222 C16orf45Q96MC5 204 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-206ENST00000487222 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-206ENST00000487222 HMG20BQ9P0W2 317 aa17.06■□□□□ 0.32
EPHB4-206ENST00000487222 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
EPHB4-206ENST00000487222 MCM3P25205 808 aa17.06■□□□□ 0.32
EPHB4-206ENST00000487222 CBX1P83916 185 aa17.06■□□□□ 0.32
EPHB4-206ENST00000487222 PCDHB15Q9Y5E8 787 aa17.06■□□□□ 0.32
EPHB4-206ENST00000487222 RALGAPBQ86X10 1494 aa17.06■□□□□ 0.32
EPHB4-206ENST00000487222 A0A087WZG4 1122 aa17.06■□□□□ 0.32
EPHB4-206ENST00000487222 ENOX2Q16206 610 aaKnown RBP17.06■□□□□ 0.32
EPHB4-206ENST00000487222 CAVIN4Q5BKX8 364 aa17.06■□□□□ 0.32
EPHB4-206ENST00000487222 PPP1R42Q7Z4L9 355 aa17.05■□□□□ 0.32
EPHB4-206ENST00000487222 IQCA1Q86XH1 822 aa17.05■□□□□ 0.32
EPHB4-206ENST00000487222 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
EPHB4-206ENST00000487222 PPP1R12BO60237 982 aaPredicted RBP17.05■□□□□ 0.32
EPHB4-206ENST00000487222 ZNF76P36508 570 aa17.05■□□□□ 0.32
EPHB4-206ENST00000487222 PIK3R4Q99570 1358 aa17.05■□□□□ 0.32
EPHB4-206ENST00000487222 USP5P45974 858 aa17.05■□□□□ 0.32
EPHB4-206ENST00000487222 CCT2P78371 535 aaKnown RBP17.05■□□□□ 0.32
EPHB4-206ENST00000487222 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
EPHB4-206ENST00000487222 TMX3Q96JJ7 454 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms