RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 RIPK4P57078 832 aa29.53■■■□□ 2.32
CDHR3-212ENST00000487084 NLGN1Q8N2Q7 840 aa29.53■■■□□ 2.32
CDHR3-212ENST00000487084 NLGN2Q8NFZ4 835 aa29.53■■■□□ 2.32
CDHR3-212ENST00000487084 TEX13AQ9BXU3 409 aaPredicted RBP29.53■■■□□ 2.32
CDHR3-212ENST00000487084 MIS18AQ9NYP9 233 aa29.53■■■□□ 2.32
CDHR3-212ENST00000487084 C4AP0C0L4 1744 aa29.53■■■□□ 2.32
CDHR3-212ENST00000487084 ADAMTS8Q9UP79 889 aa29.52■■■□□ 2.32
CDHR3-212ENST00000487084 USP42Q9H9J4 1324 aaKnown RBP29.51■■■□□ 2.32
CDHR3-212ENST00000487084 RRP7AQ9Y3A4 280 aaKnown RBP29.51■■■□□ 2.31
CDHR3-212ENST00000487084 COL15A1P39059 1388 aa29.51■■■□□ 2.31
CDHR3-212ENST00000487084 ZPR1O75312 459 aa29.5■■■□□ 2.31
CDHR3-212ENST00000487084 TMPOP42166 694 aaKnown RBP29.5■■■□□ 2.31
CDHR3-212ENST00000487084 RUNDC1Q96C34 613 aa29.5■■■□□ 2.31
CDHR3-212ENST00000487084 NEUROD2Q15784 382 aa29.49■■■□□ 2.31
CDHR3-212ENST00000487084 PELP1Q8IZL8 1130 aaKnown RBP29.49■■■□□ 2.31
CDHR3-212ENST00000487084 ZNF330Q9Y3S2 320 aaPredicted RBP29.49■■■□□ 2.31
CDHR3-212ENST00000487084 ANP32CO43423 234 aa29.48■■■□□ 2.31
CDHR3-212ENST00000487084 PNISRQ8TF01 805 aaKnown RBP29.48■■■□□ 2.31
CDHR3-212ENST00000487084 LMOD3Q0VAK6 560 aa29.47■■■□□ 2.31
CDHR3-212ENST00000487084 USPL1Q5W0Q7 1092 aa29.47■■■□□ 2.31
CDHR3-212ENST00000487084 CD2APQ9Y5K6 639 aa29.47■■■□□ 2.31
CDHR3-212ENST00000487084 PRAMEF22A3QJZ6 481 aa29.46■■■□□ 2.31
CDHR3-212ENST00000487084 SNRPA1P09661 255 aaKnown RBP29.46■■■□□ 2.31
CDHR3-212ENST00000487084 FKBP8Q14318 412 aa29.46■■■□□ 2.31
CDHR3-212ENST00000487084 A1BGP04217 495 aa29.45■■■□□ 2.31
CDHR3-212ENST00000487084 GPR162Q16538 588 aa29.45■■■□□ 2.31
CDHR3-212ENST00000487084 USP16Q9Y5T5 823 aa29.45■■■□□ 2.31
CDHR3-212ENST00000487084 PARP3Q9Y6F1 533 aa29.45■■■□□ 2.31
CDHR3-212ENST00000487084 NPM2Q86SE8 214 aaKnown RBP29.43■■■□□ 2.3
CDHR3-212ENST00000487084 NARFQ9UHQ1 456 aa29.43■■■□□ 2.3
CDHR3-212ENST00000487084 A0A087WZG4 1122 aa29.42■■■□□ 2.3
CDHR3-212ENST00000487084 EIF5P55010 431 aaKnown RBP29.42■■■□□ 2.3
CDHR3-212ENST00000487084 PIP4K2AP48426 406 aaPredicted RBP29.41■■■□□ 2.3
CDHR3-212ENST00000487084 CCDC184Q52MB2 194 aa29.41■■■□□ 2.3
CDHR3-212ENST00000487084 TSPYL4Q9UJ04 414 aa29.4■■■□□ 2.3
CDHR3-212ENST00000487084 IL6STP40189 918 aaPredicted RBP29.39■■■□□ 2.3
CDHR3-212ENST00000487084 KDM3BQ7LBC6 1761 aa29.39■■■□□ 2.29
CDHR3-212ENST00000487084 EIF4A1P60842 406 aaKnown RBP29.37■■■□□ 2.29
CDHR3-212ENST00000487084 DDR1Q08345 913 aa29.37■■■□□ 2.29
CDHR3-212ENST00000487084 TBC1D2BQ9UPU7 963 aa29.37■■■□□ 2.29
CDHR3-212ENST00000487084 WWC3Q9ULE0 1092 aa29.36■■■□□ 2.29
CDHR3-212ENST00000487084 BCL2L12Q9HB09 334 aa29.35■■■□□ 2.29
CDHR3-212ENST00000487084 MRS2Q9HD23 443 aa29.35■■■□□ 2.29
CDHR3-212ENST00000487084 TRIM35Q9UPQ4 493 aa29.35■■■□□ 2.29
CDHR3-212ENST00000487084 LAS1LQ9Y4W2 734 aaKnown RBP29.34■■■□□ 2.29
CDHR3-212ENST00000487084 C10orf71Q711Q0 1435 aa29.34■■■□□ 2.29
CDHR3-212ENST00000487084 POLRMTO00411 1230 aaKnown RBP29.33■■■□□ 2.29
CDHR3-212ENST00000487084 APAF1O14727 1248 aa29.33■■■□□ 2.29
CDHR3-212ENST00000487084 GIGYF1O75420 1035 aaPredicted RBP29.33■■■□□ 2.29
CDHR3-212ENST00000487084 YY1P25490 414 aa29.33■■■□□ 2.29
CDHR3-212ENST00000487084 TM4SF1P30408 202 aa29.33■■■□□ 2.29
CDHR3-212ENST00000487084 NFIXQ14938 502 aa29.33■■■□□ 2.29
CDHR3-212ENST00000487084 YBX3P16989 372 aaKnown RBP eCLIP29.32■■■□□ 2.28
CDHR3-212ENST00000487084 BICDL1Q6ZP65 573 aa29.32■■■□□ 2.28
CDHR3-212ENST00000487084 DZIP3Q86Y13 1208 aaKnown RBP29.32■■■□□ 2.28
CDHR3-212ENST00000487084 BABAM1Q9NWV8 329 aa29.3■■■□□ 2.28
CDHR3-212ENST00000487084 LAMB4A4D0S4 1761 aa29.29■■■□□ 2.28
CDHR3-212ENST00000487084 NBPF26B4DH59 902 aa29.29■■■□□ 2.28
CDHR3-212ENST00000487084 NBPF10Q6P3W6 841 aaKnown RBP29.29■■■□□ 2.28
CDHR3-212ENST00000487084 NBPF15Q8N660 670 aa29.29■■■□□ 2.28
CDHR3-212ENST00000487084 PXDNLA1KZ92 1463 aa29.29■■■□□ 2.28
CDHR3-212ENST00000487084 SCN7AQ01118 1682 aa29.28■■■□□ 2.28
CDHR3-212ENST00000487084 CAMTA2O94983 1202 aa29.28■■■□□ 2.28
CDHR3-212ENST00000487084 TGFB2P61812 414 aa29.28■■■□□ 2.28
CDHR3-212ENST00000487084 A0A0G2JLW4 131 aa29.27■■■□□ 2.28
CDHR3-212ENST00000487084 TBC1D9BQ66K14 1250 aa29.27■■■□□ 2.28
CDHR3-212ENST00000487084 UTRNP46939 3433 aa29.27■■■□□ 2.28
CDHR3-212ENST00000487084 NGEFQ8N5V2 710 aa29.26■■■□□ 2.27
CDHR3-212ENST00000487084 KIF13BQ9NQT8 1826 aa29.26■■■□□ 2.27
CDHR3-212ENST00000487084 GRIN3BO60391 1043 aa29.25■■■□□ 2.27
CDHR3-212ENST00000487084 SERPINB2P05120 415 aa29.25■■■□□ 2.27
CDHR3-212ENST00000487084 SENP3-EIF4A1A0A087X0R7 540 aa29.24■■■□□ 2.27
CDHR3-212ENST00000487084 DPEP1P16444 411 aa29.24■■■□□ 2.27
CDHR3-212ENST00000487084 CHL1O00533 1208 aa29.23■■■□□ 2.27
CDHR3-212ENST00000487084 MYL6BP14649 208 aa29.23■■■□□ 2.27
CDHR3-212ENST00000487084 EIF2S2P20042 333 aaKnown RBP29.23■■■□□ 2.27
CDHR3-212ENST00000487084 GOLGB1Q14789 3259 aaKnown RBP29.23■■■□□ 2.27
CDHR3-212ENST00000487084 N4BP2Q86UW6 1770 aaPredicted RBP29.21■■■□□ 2.27
CDHR3-212ENST00000487084 ZNF652Q9Y2D9 606 aa29.21■■■□□ 2.27
CDHR3-212ENST00000487084 SETDB2Q96T68 719 aa29.2■■■□□ 2.26
CDHR3-212ENST00000487084 CARMIL3Q8ND23 1372 aa29.2■■■□□ 2.26
CDHR3-212ENST00000487084 BCORQ6W2J9 1755 aa29.2■■■□□ 2.26
CDHR3-212ENST00000487084 KIAA1551Q9HCM1 1747 aa29.2■■■□□ 2.26
CDHR3-212ENST00000487084 KRT24Q2M2I5 525 aa29.19■■■□□ 2.26
CDHR3-212ENST00000487084 CFAP44Q96MT7 982 aa29.19■■■□□ 2.26
CDHR3-212ENST00000487084 BCS1LQ9Y276 419 aa29.19■■■□□ 2.26
CDHR3-212ENST00000487084 NPHP1O15259 732 aa29.18■■■□□ 2.26
CDHR3-212ENST00000487084 CALD1Q05682 793 aaKnown RBP29.18■■■□□ 2.26
CDHR3-212ENST00000487084 NECTIN2Q92692 538 aa29.18■■■□□ 2.26
CDHR3-212ENST00000487084 AFDNP55196 1824 aaKnown RBP29.17■■■□□ 2.26
CDHR3-212ENST00000487084 CHRNA5P30532 468 aa29.17■■■□□ 2.26
CDHR3-212ENST00000487084 CLEC4GQ6UXB4 293 aa29.17■■■□□ 2.26
CDHR3-212ENST00000487084 ERBB4Q15303 1308 aa29.17■■■□□ 2.26
CDHR3-212ENST00000487084 KIF6Q6ZMV9 814 aa29.16■■■□□ 2.26
CDHR3-212ENST00000487084 MBIPQ9NS73 344 aa29.16■■■□□ 2.26
CDHR3-212ENST00000487084 NRXN2Q9P2S2 1712 aa29.16■■■□□ 2.26
CDHR3-212ENST00000487084 HLFQ16534 295 aa29.14■■■□□ 2.26
CDHR3-212ENST00000487084 CCDC24Q8N4L8 307 aa29.14■■■□□ 2.26
CDHR3-212ENST00000487084 IFT57Q9NWB7 429 aa29.14■■■□□ 2.26
CDHR3-212ENST00000487084 PIM2Q9P1W9 311 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms