RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 FAM212AQ96EL1 285 aa7.21□□□□□ -1.26
SF1-217ENST00000486960 QRICH2Q9H0J4 1663 aa7.21□□□□□ -1.26
SF1-217ENST00000486960 TRPM3Q9HCF6 1732 aaPredicted RBP7.21□□□□□ -1.26
SF1-217ENST00000486960 ROBO2Q9HCK4 1378 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 SBNO2Q9Y2G9 1366 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 ALS2Q96Q42 1657 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 ATP7BP35670 1465 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.2□□□□□ -1.26
SF1-217ENST00000486960 C19orf67A6NJJ6 358 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 CREB3O43889 395 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 MLLT3P42568 568 aaPredicted RBP7.2□□□□□ -1.26
SF1-217ENST00000486960 TTLL12Q14166 644 aaPredicted RBP7.2□□□□□ -1.26
SF1-217ENST00000486960 HSP90AB2PQ58FF8 381 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 CCDC102AQ96A19 550 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 MEGF6O75095 1541 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 KCPQ6ZWJ8 1503 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 WNK3Q9BYP7 1800 aa7.2□□□□□ -1.26
SF1-217ENST00000486960 PXDNLA1KZ92 1463 aa7.19□□□□□ -1.26
SF1-217ENST00000486960 KNDC1Q76NI1 1749 aa7.19□□□□□ -1.26
SF1-217ENST00000486960 SH3BP5O60239 455 aa7.19□□□□□ -1.26
SF1-217ENST00000486960 IBSPP21815 317 aaPredicted RBP7.19□□□□□ -1.26
SF1-217ENST00000486960 RFX1P22670 979 aa7.19□□□□□ -1.26
SF1-217ENST00000486960 HABP4Q5JVS0 413 aaKnown RBP7.19□□□□□ -1.26
SF1-217ENST00000486960 WDR78Q5VTH9 848 aa7.19□□□□□ -1.26
SF1-217ENST00000486960 B4GALNT3Q6L9W6 998 aa7.19□□□□□ -1.26
SF1-217ENST00000486960 DNAJC14Q6Y2X3 702 aaPredicted RBP7.19□□□□□ -1.26
SF1-217ENST00000486960 GIPC2Q8TF65 315 aa7.19□□□□□ -1.26
SF1-217ENST00000486960 KLHL42Q9P2K6 505 aa7.19□□□□□ -1.26
SF1-217ENST00000486960 MKRN1Q9UHC7 482 aaKnown RBP7.19□□□□□ -1.26
SF1-217ENST00000486960 C10orf71Q711Q0 1435 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 KIAA1551Q9HCM1 1747 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 CCDC194A0A1B0GVG4 234 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 IRF6O14896 467 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 VAMP1P23763 118 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 FXR1P51114 621 aaKnown RBP eCLIP7.18□□□□□ -1.26
SF1-217ENST00000486960 MAP2K5Q13163 448 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 PDE3BQ13370 1112 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 GLIPR1L2Q4G1C9 344 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 ZFYVE27Q5T4F4 411 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 KRBA2Q6ZNG9 492 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 CCDC144AA2RUR9 1427 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 CEP162Q5TB80 1403 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 CASKIN1Q8WXD9 1431 aa7.18□□□□□ -1.26
SF1-217ENST00000486960 IQGAP3Q86VI3 1631 aa7.17□□□□□ -1.26
SF1-217ENST00000486960 TLDC2A0PJX2 215 aa7.17□□□□□ -1.26
SF1-217ENST00000486960 PPFIA4O75335 1185 aa7.17□□□□□ -1.26
SF1-217ENST00000486960 PTPROQ16827 1216 aa7.17□□□□□ -1.26
SF1-217ENST00000486960 MTA3Q9BTC8 594 aa7.17□□□□□ -1.26
SF1-217ENST00000486960 OVOS2A0A0G2JMS6 1433 aa7.17□□□□□ -1.26
SF1-217ENST00000486960 OVOS2A0A0J9YW53 1432 aa7.17□□□□□ -1.26
SF1-217ENST00000486960 OVOS2Q6IE36 1432 aa7.17□□□□□ -1.26
SF1-217ENST00000486960 TRIOBPQ9H2D6 2365 aa7.17□□□□□ -1.26
SF1-217ENST00000486960 SBF1O95248 1867 aa7.16□□□□□ -1.26
SF1-217ENST00000486960 NUTM2FA1L443 756 aa7.16□□□□□ -1.26
SF1-217ENST00000486960 PARNO95453 639 aaKnown RBP7.16□□□□□ -1.26
SF1-217ENST00000486960 RASEFQ8IZ41 740 aa7.16□□□□□ -1.26
SF1-217ENST00000486960 LARGE2Q8N3Y3 721 aa7.16□□□□□ -1.26
SF1-217ENST00000486960 SPOCK3Q9BQ16 436 aa7.16□□□□□ -1.26
SF1-217ENST00000486960 TBC1D2Q9BYX2 928 aa7.16□□□□□ -1.26
SF1-217ENST00000486960 BTAF1O14981 1849 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 RANBP2P49792 3224 aaKnown RBP7.15□□□□□ -1.26
SF1-217ENST00000486960 SOX12O15370 315 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 LIG1P18858 919 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 POLD1P28340 1107 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 NUBP1P53384 320 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 FOXD4Q12950 439 aaPredicted RBP7.15□□□□□ -1.26
SF1-217ENST00000486960 KRT28Q7Z3Y7 464 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 CCAR1Q8IX12 1150 aaKnown RBP7.15□□□□□ -1.26
SF1-217ENST00000486960 BANK1Q8NDB2 785 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.15□□□□□ -1.26
SF1-217ENST00000486960 KCNB2Q92953 911 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 VTI1AQ96AJ9 217 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 GPATCH3Q96I76 525 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 WBP1LQ9NX94 342 aa7.15□□□□□ -1.26
SF1-217ENST00000486960 HFM1A2PYH4 1435 aa7.15□□□□□ -1.27
SF1-217ENST00000486960 BRCA2P51587 3418 aa7.15□□□□□ -1.27
SF1-217ENST00000486960 CALRP27797 417 aaKnown RBP7.14□□□□□ -1.27
SF1-217ENST00000486960 LTBP1Q14766 1721 aa7.14□□□□□ -1.27
SF1-217ENST00000486960 PNPLA7Q6ZV29 1317 aa7.14□□□□□ -1.27
SF1-217ENST00000486960 N4BP2Q86UW6 1770 aaPredicted RBP7.14□□□□□ -1.27
SF1-217ENST00000486960 C16orf71Q8IYS4 520 aaPredicted RBP7.14□□□□□ -1.27
SF1-217ENST00000486960 PMM1Q92871 262 aa7.14□□□□□ -1.27
SF1-217ENST00000486960 SECISBP2LQ93073 1101 aaKnown RBP7.14□□□□□ -1.27
SF1-217ENST00000486960 CUEDC1Q9NWM3 386 aaPredicted RBP7.14□□□□□ -1.27
SF1-217ENST00000486960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.14□□□□□ -1.271e-10■■■□□ 15.6
SF1-217ENST00000486960 NAP1L2Q9ULW6 460 aaPredicted RBP7.14□□□□□ -1.27
SF1-217ENST00000486960 FAN1Q9Y2M0 1017 aa7.14□□□□□ -1.27
SF1-217ENST00000486960 BRCA1P38398 1863 aaKnown RBP7.13□□□□□ -1.27
SF1-217ENST00000486960 NHSQ6T4R5 1651 aa7.13□□□□□ -1.27
SF1-217ENST00000486960 LRPPRCP42704 1394 aaKnown RBP7.13□□□□□ -1.27
SF1-217ENST00000486960 MS4A1P11836 297 aa7.13□□□□□ -1.27
SF1-217ENST00000486960 MARSP56192 900 aaKnown RBP7.13□□□□□ -1.27
SF1-217ENST00000486960 SOX10P56693 466 aa7.13□□□□□ -1.27
SF1-217ENST00000486960 SRPK2P78362 688 aaKnown RBP7.13□□□□□ -1.27
SF1-217ENST00000486960 EVX2Q03828 476 aa7.13□□□□□ -1.27
SF1-217ENST00000486960 EGFLAMQ63HQ2 1017 aa7.13□□□□□ -1.27
SF1-217ENST00000486960 SLC17A8Q8NDX2 589 aa7.13□□□□□ -1.27
SF1-217ENST00000486960 PMFBP1Q8TBY8 1022 aa7.13□□□□□ -1.27
SF1-217ENST00000486960 IPO4Q8TEX9 1081 aaKnown RBP7.13□□□□□ -1.27
SF1-217ENST00000486960 MAF1Q9H063 256 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms